EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000025729 (Gene tree)
Gene ID: 102181605
Gene Symbol: C1D
Alias: LRP1|Rrp47|SUN-CoR|SUNCOR
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 9888 bases
Position: chr11:66205233-66215120
Accession: 102181605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031335	Sas10_Utp3	PF04000.15	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039208	C1D-201	638	XM_005686811	ENSCHIP00000031335	141 (aa)	XP_005686868	UPI00029D8234

Gene Model

Click here to download ENSCHIG00000025729's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025729	C1D	100	96.454	ENSG00000197223	C1D	100	96.454	Homo_sapiens
ENSCHIG00000025729	C1D	99	63.121	ENSAPOG00000005466	c1d	95	63.121	Acanthochromis_polyacanthus
ENSCHIG00000025729	C1D	99	97.842	ENSAMEG00000004859	C1D	95	97.842	Ailuropoda_melanoleuca
ENSCHIG00000025729	C1D	94	65.152	ENSACIG00000012684	c1d	86	65.152	Amphilophus_citrinellus
ENSCHIG00000025729	C1D	93	64.394	ENSAOCG00000020354	c1d	93	61.029	Amphiprion_ocellaris
ENSCHIG00000025729	C1D	96	64.234	ENSAPEG00000001403	c1d	88	64.234	Amphiprion_percula
ENSCHIG00000025729	C1D	96	64.234	ENSATEG00000012922	c1d	88	64.234	Anabas_testudineus
ENSCHIG00000025729	C1D	94	77.037	ENSAPLG00000009320	C1D	93	77.037	Anas_platyrhynchos
ENSCHIG00000025729	C1D	87	81.148	ENSACAG00000001337	C1D	100	81.148	Anolis_carolinensis
ENSCHIG00000025729	C1D	100	92.908	ENSANAG00000005773	-	100	92.908	Aotus_nancymaae
ENSCHIG00000025729	C1D	100	96.454	ENSANAG00000035972	-	100	96.454	Aotus_nancymaae
ENSCHIG00000025729	C1D	87	65.574	ENSACLG00000026206	c1d	93	60.714	Astatotilapia_calliptera
ENSCHIG00000025729	C1D	100	62.411	ENSAMXG00000043212	c1d	93	62.411	Astyanax_mexicanus
ENSCHIG00000025729	C1D	100	99.291	ENSBTAG00000049002	C1D	100	99.291	Bos_taurus
ENSCHIG00000025729	C1D	83	88.034	ENSCJAG00000044668	-	91	88.034	Callithrix_jacchus
ENSCHIG00000025729	C1D	100	97.163	ENSCJAG00000006589	C1D	93	96.454	Callithrix_jacchus
ENSCHIG00000025729	C1D	100	96.454	ENSCAFG00000030099	C1D	100	96.454	Canis_familiaris
ENSCHIG00000025729	C1D	100	96.454	ENSCAFG00020026997	C1D	100	96.454	Canis_lupus_dingo
ENSCHIG00000025729	C1D	99	87.143	ENSTSYG00000026573	-	85	87.143	Carlito_syrichta
ENSCHIG00000025729	C1D	100	97.872	ENSTSYG00000035739	-	100	97.872	Carlito_syrichta
ENSCHIG00000025729	C1D	100	73.050	ENSCAPG00000011523	-	100	73.050	Cavia_aperea
ENSCHIG00000025729	C1D	100	93.617	ENSCPOG00000037986	-	100	93.617	Cavia_porcellus
ENSCHIG00000025729	C1D	100	73.759	ENSCPOG00000020112	-	100	73.759	Cavia_porcellus
ENSCHIG00000025729	C1D	100	97.163	ENSCCAG00000030405	-	100	97.163	Cebus_capucinus
ENSCHIG00000025729	C1D	100	93.617	ENSCATG00000043348	-	100	93.617	Cercocebus_atys
ENSCHIG00000025729	C1D	100	96.454	ENSCATG00000045336	C1D	100	96.454	Cercocebus_atys
ENSCHIG00000025729	C1D	100	95.745	ENSCLAG00000011883	C1D	100	95.745	Chinchilla_lanigera
ENSCHIG00000025729	C1D	100	95.035	ENSCSAG00000014811	C1D	100	95.035	Chlorocebus_sabaeus
ENSCHIG00000025729	C1D	100	97.872	ENSCHOG00000006719	C1D	79	97.872	Choloepus_hoffmanni
ENSCHIG00000025729	C1D	94	81.203	ENSCPBG00000014451	C1D	90	81.203	Chrysemys_picta_bellii
ENSCHIG00000025729	C1D	86	42.149	ENSCING00000020906	-	64	41.803	Ciona_intestinalis
ENSCHIG00000025729	C1D	83	47.009	ENSCSAVG00000000150	-	67	47.009	Ciona_savignyi
ENSCHIG00000025729	C1D	100	95.745	ENSCANG00000035564	C1D	100	95.745	Colobus_angolensis_palliatus
ENSCHIG00000025729	C1D	87	83.740	ENSCANG00000036599	-	100	83.740	Colobus_angolensis_palliatus
ENSCHIG00000025729	C1D	100	90.780	ENSCGRG00001023376	C1d	100	90.780	Cricetulus_griseus_chok1gshd
ENSCHIG00000025729	C1D	100	90.780	ENSCGRG00000010245	C1d	100	90.780	Cricetulus_griseus_crigri
ENSCHIG00000025729	C1D	92	61.538	ENSCSEG00000000587	c1d	91	61.538	Cynoglossus_semilaevis
ENSCHIG00000025729	C1D	96	61.765	ENSCVAG00000004603	c1d	87	63.359	Cyprinodon_variegatus
ENSCHIG00000025729	C1D	87	65.041	ENSDARG00000021112	c1d	95	60.284	Danio_rerio
ENSCHIG00000025729	C1D	100	89.362	ENSDNOG00000046068	-	100	89.362	Dasypus_novemcinctus
ENSCHIG00000025729	C1D	100	93.617	ENSDORG00000003300	C1d	100	93.617	Dipodomys_ordii
ENSCHIG00000025729	C1D	67	91.579	ENSETEG00000014857	C1D	100	91.579	Echinops_telfairi
ENSCHIG00000025729	C1D	86	57.025	ENSEBUG00000006874	c1d	76	57.025	Eptatretus_burgeri
ENSCHIG00000025729	C1D	100	97.872	ENSEASG00005007307	C1D	92	97.872	Equus_asinus_asinus
ENSCHIG00000025729	C1D	99	97.122	ENSECAG00000002187	C1D	99	97.826	Equus_caballus
ENSCHIG00000025729	C1D	100	63.121	ENSELUG00000014823	c1d	96	63.121	Esox_lucius
ENSCHIG00000025729	C1D	100	98.582	ENSFCAG00000028933	C1D	100	98.582	Felis_catus
ENSCHIG00000025729	C1D	93	80.451	ENSFALG00000013640	C1D	81	80.451	Ficedula_albicollis
ENSCHIG00000025729	C1D	100	96.454	ENSFDAG00000010462	-	100	96.454	Fukomys_damarensis
ENSCHIG00000025729	C1D	100	75.352	ENSFDAG00000014175	-	100	75.352	Fukomys_damarensis
ENSCHIG00000025729	C1D	99	64.286	ENSFHEG00000010545	c1d	97	64.286	Fundulus_heteroclitus
ENSCHIG00000025729	C1D	83	64.957	ENSGMOG00000013911	-	93	64.957	Gadus_morhua
ENSCHIG00000025729	C1D	96	78.417	ENSGALG00000008765	C1D	97	78.417	Gallus_gallus
ENSCHIG00000025729	C1D	92	65.385	ENSGAFG00000012578	c1d	83	65.385	Gambusia_affinis
ENSCHIG00000025729	C1D	89	63.200	ENSGACG00000011981	c1d	98	63.200	Gasterosteus_aculeatus
ENSCHIG00000025729	C1D	88	81.452	ENSGAGG00000013383	C1D	90	78.195	Gopherus_agassizii
ENSCHIG00000025729	C1D	100	97.872	ENSGGOG00000025982	-	78	97.872	Gorilla_gorilla
ENSCHIG00000025729	C1D	100	88.652	ENSGGOG00000025808	-	80	88.652	Gorilla_gorilla
ENSCHIG00000025729	C1D	100	95.035	ENSGGOG00000022296	-	100	95.035	Gorilla_gorilla
ENSCHIG00000025729	C1D	82	67.241	ENSHBUG00000018531	c1d	80	61.940	Haplochromis_burtoni
ENSCHIG00000025729	C1D	100	84.397	ENSHGLG00000021219	-	100	84.397	Heterocephalus_glaber_female
ENSCHIG00000025729	C1D	92	96.154	ENSHGLG00000012332	-	99	94.286	Heterocephalus_glaber_female
ENSCHIG00000025729	C1D	100	85.106	ENSHGLG00100019951	-	100	85.106	Heterocephalus_glaber_male
ENSCHIG00000025729	C1D	100	92.199	ENSHGLG00100000221	-	100	92.199	Heterocephalus_glaber_male
ENSCHIG00000025729	C1D	95	61.194	ENSHCOG00000014589	c1d	91	61.194	Hippocampus_comes
ENSCHIG00000025729	C1D	95	61.194	ENSHCOG00000014568	C1D	91	61.194	Hippocampus_comes
ENSCHIG00000025729	C1D	92	60.902	ENSIPUG00000018661	c1d	92	60.902	Ictalurus_punctatus
ENSCHIG00000025729	C1D	100	96.454	ENSSTOG00000012346	C1D	100	96.454	Ictidomys_tridecemlineatus
ENSCHIG00000025729	C1D	89	80.769	ENSJJAG00000023186	-	99	80.769	Jaculus_jaculus
ENSCHIG00000025729	C1D	98	81.884	ENSJJAG00000009540	-	100	81.884	Jaculus_jaculus
ENSCHIG00000025729	C1D	98	81.884	ENSJJAG00000005044	-	100	81.884	Jaculus_jaculus
ENSCHIG00000025729	C1D	98	73.913	ENSJJAG00000016086	-	100	73.913	Jaculus_jaculus
ENSCHIG00000025729	C1D	96	65.441	ENSKMAG00000015077	c1d	88	65.441	Kryptolebias_marmoratus
ENSCHIG00000025729	C1D	99	63.571	ENSLBEG00000008351	c1d	88	63.571	Labrus_bergylta
ENSCHIG00000025729	C1D	89	78.740	ENSLACG00000007516	C1D	85	78.740	Latimeria_chalumnae
ENSCHIG00000025729	C1D	99	64.583	ENSLOCG00000016024	c1d	98	64.583	Lepisosteus_oculatus
ENSCHIG00000025729	C1D	100	95.745	ENSLAFG00000002083	C1D	100	95.745	Loxodonta_africana
ENSCHIG00000025729	C1D	100	96.454	ENSMFAG00000034261	C1D	100	96.454	Macaca_fascicularis
ENSCHIG00000025729	C1D	100	92.908	ENSMFAG00000034034	-	100	92.908	Macaca_fascicularis
ENSCHIG00000025729	C1D	100	95.035	ENSMFAG00000028681	-	100	95.035	Macaca_fascicularis
ENSCHIG00000025729	C1D	98	97.101	ENSMMUG00000041557	C1D	99	97.101	Macaca_mulatta
ENSCHIG00000025729	C1D	100	92.199	ENSMMUG00000043184	-	100	92.199	Macaca_mulatta
ENSCHIG00000025729	C1D	100	94.326	ENSMMUG00000017209	-	100	94.326	Macaca_mulatta
ENSCHIG00000025729	C1D	100	96.454	ENSMNEG00000040612	C1D	100	96.454	Macaca_nemestrina
ENSCHIG00000025729	C1D	100	92.199	ENSMNEG00000020626	-	100	92.199	Macaca_nemestrina
ENSCHIG00000025729	C1D	100	93.617	ENSMLEG00000028412	-	100	93.617	Mandrillus_leucophaeus
ENSCHIG00000025729	C1D	100	96.454	ENSMLEG00000027619	C1D	100	96.454	Mandrillus_leucophaeus
ENSCHIG00000025729	C1D	91	65.625	ENSMAMG00000022156	c1d	90	64.748	Mastacembelus_armatus
ENSCHIG00000025729	C1D	82	67.241	ENSMZEG00005027343	c1d	92	61.940	Maylandia_zebra
ENSCHIG00000025729	C1D	99	77.143	ENSMGAG00000004517	C1D	99	77.143	Meleagris_gallopavo
ENSCHIG00000025729	C1D	100	90.071	ENSMAUG00000008974	C1d	100	90.071	Mesocricetus_auratus
ENSCHIG00000025729	C1D	100	97.163	ENSMICG00000032141	C1D	100	97.163	Microcebus_murinus
ENSCHIG00000025729	C1D	100	90.780	ENSMOCG00000010860	C1d	100	90.780	Microtus_ochrogaster
ENSCHIG00000025729	C1D	99	64.286	ENSMMOG00000007332	c1d	88	64.286	Mola_mola
ENSCHIG00000025729	C1D	99	80.851	ENSMODG00000003561	C1D	99	80.851	Monodelphis_domestica
ENSCHIG00000025729	C1D	94	63.636	ENSMALG00000020864	c1d	100	59.854	Monopterus_albus
ENSCHIG00000025729	C1D	100	89.362	MGP_CAROLIEiJ_G0016110	C1d	100	90.678	Mus_caroli
ENSCHIG00000025729	C1D	100	89.362	ENSMUSG00000000581	C1d	100	90.678	Mus_musculus
ENSCHIG00000025729	C1D	100	90.071	MGP_PahariEiJ_G0016781	C1d	100	91.525	Mus_pahari
ENSCHIG00000025729	C1D	100	89.362	MGP_SPRETEiJ_G0016952	C1d	100	90.678	Mus_spretus
ENSCHIG00000025729	C1D	100	97.872	ENSMPUG00000006224	C1D	100	97.872	Mustela_putorius_furo
ENSCHIG00000025729	C1D	99	93.571	ENSMLUG00000010791	-	99	93.571	Myotis_lucifugus
ENSCHIG00000025729	C1D	99	90.000	ENSMLUG00000029990	-	99	90.000	Myotis_lucifugus
ENSCHIG00000025729	C1D	99	91.429	ENSMLUG00000024947	-	99	91.429	Myotis_lucifugus
ENSCHIG00000025729	C1D	100	88.652	ENSNGAG00000011872	-	100	88.652	Nannospalax_galili
ENSCHIG00000025729	C1D	100	80.851	ENSNGAG00000016675	-	100	80.851	Nannospalax_galili
ENSCHIG00000025729	C1D	89	81.746	ENSNGAG00000012482	-	100	81.746	Nannospalax_galili
ENSCHIG00000025729	C1D	82	66.379	ENSNBRG00000010704	c1d	92	61.194	Neolamprologus_brichardi
ENSCHIG00000025729	C1D	100	95.745	ENSNLEG00000032919	-	78	95.745	Nomascus_leucogenys
ENSCHIG00000025729	C1D	100	95.035	ENSOPRG00000009586	C1D	100	95.035	Ochotona_princeps
ENSCHIG00000025729	C1D	100	84.397	ENSODEG00000018525	-	100	84.397	Octodon_degus
ENSCHIG00000025729	C1D	99	96.429	ENSODEG00000011242	-	99	96.429	Octodon_degus
ENSCHIG00000025729	C1D	98	96.377	ENSODEG00000018885	-	99	96.377	Octodon_degus
ENSCHIG00000025729	C1D	87	66.667	ENSONIG00000001233	c1d	89	64.179	Oreochromis_niloticus
ENSCHIG00000025729	C1D	78	85.455	ENSOANG00000008385	C1D	99	85.455	Ornithorhynchus_anatinus
ENSCHIG00000025729	C1D	100	93.617	ENSOCUG00000009771	-	100	93.617	Oryctolagus_cuniculus
ENSCHIG00000025729	C1D	100	93.617	ENSOCUG00000025587	-	100	93.617	Oryctolagus_cuniculus
ENSCHIG00000025729	C1D	94	65.152	ENSORLG00000021968	c1d	85	65.152	Oryzias_latipes
ENSCHIG00000025729	C1D	89	68.000	ENSORLG00020000507	c1d	81	68.000	Oryzias_latipes_hni
ENSCHIG00000025729	C1D	89	68.000	ENSORLG00015004594	c1d	80	68.000	Oryzias_latipes_hsok
ENSCHIG00000025729	C1D	94	67.424	ENSOMEG00000004672	c1d	85	67.424	Oryzias_melastigma
ENSCHIG00000025729	C1D	100	96.454	ENSOGAG00000027934	-	100	96.454	Otolemur_garnettii
ENSCHIG00000025729	C1D	100	100.000	ENSOARG00000019931	C1D	99	100.000	Ovis_aries
ENSCHIG00000025729	C1D	100	97.163	ENSPPAG00000037847	-	100	97.163	Pan_paniscus
ENSCHIG00000025729	C1D	100	89.362	ENSPPAG00000040091	-	80	89.362	Pan_paniscus
ENSCHIG00000025729	C1D	100	97.872	ENSPPRG00000017045	-	100	97.872	Panthera_pardus
ENSCHIG00000025729	C1D	100	65.957	ENSPPRG00000022830	-	100	65.957	Panthera_pardus
ENSCHIG00000025729	C1D	100	98.582	ENSPTIG00000009414	C1D	100	98.582	Panthera_tigris_altaica
ENSCHIG00000025729	C1D	100	97.163	ENSPTRG00000023558	C1D	100	97.163	Pan_troglodytes
ENSCHIG00000025729	C1D	100	92.908	ENSPANG00000000501	-	100	92.908	Papio_anubis
ENSCHIG00000025729	C1D	100	96.454	ENSPANG00000002886	C1D	78	96.454	Papio_anubis
ENSCHIG00000025729	C1D	92	64.885	ENSPKIG00000004877	c1d	88	64.885	Paramormyrops_kingsleyae
ENSCHIG00000025729	C1D	94	82.707	ENSPSIG00000010015	C1D	92	82.707	Pelodiscus_sinensis
ENSCHIG00000025729	C1D	91	63.566	ENSPMGG00000009326	c1d	85	62.879	Periophthalmus_magnuspinnatus
ENSCHIG00000025729	C1D	99	82.270	ENSPCIG00000018629	-	99	82.270	Phascolarctos_cinereus
ENSCHIG00000025729	C1D	100	75.887	ENSPCIG00000006831	-	98	75.887	Phascolarctos_cinereus
ENSCHIG00000025729	C1D	96	65.441	ENSPFOG00000003686	c1d	88	65.441	Poecilia_formosa
ENSCHIG00000025729	C1D	96	65.441	ENSPLAG00000000228	c1d	96	65.441	Poecilia_latipinna
ENSCHIG00000025729	C1D	96	65.441	ENSPMEG00000023213	c1d	88	65.441	Poecilia_mexicana
ENSCHIG00000025729	C1D	99	64.748	ENSPREG00000000742	c1d	98	64.748	Poecilia_reticulata
ENSCHIG00000025729	C1D	100	90.071	ENSPPYG00000002294	-	100	90.071	Pongo_abelii
ENSCHIG00000025729	C1D	100	97.163	ENSPPYG00000012354	C1D	77	97.163	Pongo_abelii
ENSCHIG00000025729	C1D	100	84.397	ENSPCAG00000010088	C1D	79	84.397	Procavia_capensis
ENSCHIG00000025729	C1D	100	97.163	ENSPCOG00000016112	C1D	100	97.163	Propithecus_coquereli
ENSCHIG00000025729	C1D	100	97.163	ENSPVAG00000012692	C1D	79	97.163	Pteropus_vampyrus
ENSCHIG00000025729	C1D	82	67.241	ENSPNYG00000008789	c1d	92	61.940	Pundamilia_nyererei
ENSCHIG00000025729	C1D	88	70.968	ENSPNAG00000004219	c1d	85	70.968	Pygocentrus_nattereri
ENSCHIG00000025729	C1D	100	90.780	ENSRNOG00000005982	C1d	100	90.780	Rattus_norvegicus
ENSCHIG00000025729	C1D	100	92.199	ENSRBIG00000026211	-	100	92.199	Rhinopithecus_bieti
ENSCHIG00000025729	C1D	100	96.454	ENSRROG00000029013	C1D	100	96.454	Rhinopithecus_roxellana
ENSCHIG00000025729	C1D	100	92.199	ENSRROG00000005944	-	100	92.199	Rhinopithecus_roxellana
ENSCHIG00000025729	C1D	100	97.163	ENSSBOG00000025275	C1D	100	97.163	Saimiri_boliviensis_boliviensis
ENSCHIG00000025729	C1D	99	80.851	ENSSHAG00000008352	C1D	68	80.851	Sarcophilus_harrisii
ENSCHIG00000025729	C1D	88	67.742	ENSSFOG00015010861	c1d	89	67.742	Scleropages_formosus
ENSCHIG00000025729	C1D	100	58.865	ENSSMAG00000019230	c1d	91	58.865	Scophthalmus_maximus
ENSCHIG00000025729	C1D	100	62.411	ENSSDUG00000020213	c1d	91	62.411	Seriola_dumerili
ENSCHIG00000025729	C1D	100	62.411	ENSSLDG00000017371	c1d	91	62.411	Seriola_lalandi_dorsalis
ENSCHIG00000025729	C1D	89	79.200	ENSSPUG00000006525	C1D	92	75.556	Sphenodon_punctatus
ENSCHIG00000025729	C1D	92	66.923	ENSSPAG00000008574	c1d	91	63.830	Stegastes_partitus
ENSCHIG00000025729	C1D	100	97.872	ENSSSCG00000039331	-	100	97.872	Sus_scrofa
ENSCHIG00000025729	C1D	100	68.085	ENSSSCG00000035701	-	100	68.085	Sus_scrofa
ENSCHIG00000025729	C1D	93	79.699	ENSTGUG00000002367	C1D	92	79.699	Taeniopygia_guttata
ENSCHIG00000025729	C1D	94	60.870	ENSTRUG00000012245	c1d	83	60.870	Takifugu_rubripes
ENSCHIG00000025729	C1D	99	61.429	ENSTNIG00000009827	c1d	95	61.429	Tetraodon_nigroviridis
ENSCHIG00000025729	C1D	100	95.745	ENSTBEG00000009797	C1D	100	95.745	Tupaia_belangeri
ENSCHIG00000025729	C1D	100	96.454	ENSTTRG00000013982	C1D	81	96.454	Tursiops_truncatus
ENSCHIG00000025729	C1D	100	83.333	ENSUAMG00000025246	C1D	100	83.333	Ursus_americanus
ENSCHIG00000025729	C1D	100	98.582	ENSUMAG00000021118	-	100	98.582	Ursus_maritimus
ENSCHIG00000025729	C1D	72	75.000	ENSUMAG00000006451	-	91	74.561	Ursus_maritimus
ENSCHIG00000025729	C1D	100	95.745	ENSVPAG00000012080	C1D	79	95.745	Vicugna_pacos
ENSCHIG00000025729	C1D	100	95.745	ENSVVUG00000027629	C1D	88	95.745	Vulpes_vulpes
ENSCHIG00000025729	C1D	99	68.794	ENSXETG00000025934	c1d	97	68.794	Xenopus_tropicalis
ENSCHIG00000025729	C1D	89	67.200	ENSXCOG00000013813	c1d	88	64.706	Xiphophorus_couchianus
ENSCHIG00000025729	C1D	89	66.400	ENSXMAG00000022273	c1d	88	63.971	Xiphophorus_maculatus