EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000025746 (Gene tree)
Gene ID: 102191234
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 14791 bases
Position: chr7:59874837-59889627
Accession: 102191234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031385	RRM_5	PF13893.6	2.1e-06	1	1
ENSCHIP00000031403	RRM_5	PF13893.6	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039276	-	2538	-	ENSCHIP00000031403	845 (aa)	-	UPI000D18DC85
ENSCHIT00000039258	-	2738	XM_005683005	ENSCHIP00000031385	849 (aa)	XP_005683062	UPI00029D87B1

Gene Model

Click here to download ENSCHIG00000025746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025746	-	100	98.587	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSCHIG00000025746	-	99	94.085	ENSAMEG00000011347	-	100	94.085	Ailuropoda_melanoleuca
ENSCHIG00000025746	-	100	77.863	ENSAPLG00000008118	-	100	76.368	Anas_platyrhynchos
ENSCHIG00000025746	-	99	72.203	ENSACAG00000016233	-	99	71.896	Anolis_carolinensis
ENSCHIG00000025746	-	76	72.516	ENSANAG00000024654	-	99	72.516	Aotus_nancymaae
ENSCHIG00000025746	-	100	98.115	ENSANAG00000022951	-	100	98.115	Aotus_nancymaae
ENSCHIG00000025746	-	86	32.880	ENSAMXG00000010681	matr3l1.1	77	32.207	Astyanax_mexicanus
ENSCHIG00000025746	-	94	94.181	ENSBTAG00000006756	MATR3	99	94.181	Bos_taurus
ENSCHIG00000025746	-	100	92.977	ENSCJAG00000006888	-	99	97.451	Callithrix_jacchus
ENSCHIG00000025746	-	100	98.940	ENSCAFG00000001345	MATR3	100	98.940	Canis_familiaris
ENSCHIG00000025746	-	99	96.948	ENSCAFG00020010504	-	98	99.026	Canis_lupus_dingo
ENSCHIG00000025746	-	100	98.469	ENSTSYG00000011028	-	100	98.469	Carlito_syrichta
ENSCHIG00000025746	-	100	98.469	ENSCPOG00000014076	-	100	98.469	Cavia_porcellus
ENSCHIG00000025746	-	100	98.469	ENSCCAG00000025074	-	100	98.469	Cebus_capucinus
ENSCHIG00000025746	-	65	97.459	ENSCATG00000041304	-	98	97.459	Cercocebus_atys
ENSCHIG00000025746	-	100	98.704	ENSCLAG00000015998	-	100	98.704	Chinchilla_lanigera
ENSCHIG00000025746	-	100	98.822	ENSCSAG00000013075	-	100	98.822	Chlorocebus_sabaeus
ENSCHIG00000025746	-	100	76.889	ENSCPBG00000006303	-	100	76.425	Chrysemys_picta_bellii
ENSCHIG00000025746	-	100	97.409	ENSCANG00000028224	-	100	97.409	Colobus_angolensis_palliatus
ENSCHIG00000025746	-	100	98.469	ENSCGRG00001020227	Matr3	100	98.469	Cricetulus_griseus_chok1gshd
ENSCHIG00000025746	-	100	98.351	ENSCGRG00000011298	Matr3	100	98.351	Cricetulus_griseus_crigri
ENSCHIG00000025746	-	89	32.143	ENSCSEG00000012682	matr3l1.1	93	32.143	Cynoglossus_semilaevis
ENSCHIG00000025746	-	79	39.806	ENSCVAG00000005337	matr3l1.1	57	38.835	Cyprinodon_variegatus
ENSCHIG00000025746	-	100	93.660	ENSDNOG00000037723	-	100	93.660	Dasypus_novemcinctus
ENSCHIG00000025746	-	100	99.411	ENSEASG00005020857	-	100	99.411	Equus_asinus_asinus
ENSCHIG00000025746	-	100	99.293	ENSECAG00000012882	MATR3	100	99.293	Equus_caballus
ENSCHIG00000025746	-	73	49.123	ENSELUG00000021848	matr3l1.1	86	51.515	Esox_lucius
ENSCHIG00000025746	-	76	42.718	ENSELUG00000021651	si:ch211-271b14.1	86	42.718	Esox_lucius
ENSCHIG00000025746	-	100	99.293	ENSFCAG00000021911	-	100	99.293	Felis_catus
ENSCHIG00000025746	-	100	75.821	ENSFALG00000003071	-	100	76.096	Ficedula_albicollis
ENSCHIG00000025746	-	100	97.998	ENSFDAG00000017675	-	100	97.998	Fukomys_damarensis
ENSCHIG00000025746	-	100	77.985	ENSGALG00000002478	MATR3	100	76.425	Gallus_gallus
ENSCHIG00000025746	-	100	76.721	ENSGAGG00000011386	-	100	76.425	Gopherus_agassizii
ENSCHIG00000025746	-	100	98.704	ENSGGOG00000007308	-	100	98.704	Gorilla_gorilla
ENSCHIG00000025746	-	100	98.940	ENSHGLG00000004673	MATR3	100	98.940	Heterocephalus_glaber_female
ENSCHIG00000025746	-	60	98.434	ENSHGLG00100006442	-	100	98.434	Heterocephalus_glaber_male
ENSCHIG00000025746	-	55	38.636	ENSHCOG00000013223	matr3l1.1	83	31.306	Hippocampus_comes
ENSCHIG00000025746	-	100	99.176	ENSSTOG00000014746	-	100	99.176	Ictidomys_tridecemlineatus
ENSCHIG00000025746	-	60	69.396	ENSJJAG00000011022	-	100	69.591	Jaculus_jaculus
ENSCHIG00000025746	-	100	97.527	ENSJJAG00000021710	-	100	97.527	Jaculus_jaculus
ENSCHIG00000025746	-	50	39.665	ENSLBEG00000018267	matr3l1.1	72	37.607	Labrus_bergylta
ENSCHIG00000025746	-	99	56.508	ENSLACG00000006743	-	99	57.405	Latimeria_chalumnae
ENSCHIG00000025746	-	100	93.645	ENSMFAG00000000634	-	98	97.641	Macaca_fascicularis
ENSCHIG00000025746	-	100	93.645	ENSMMUG00000016741	MATR3	99	98.866	Macaca_mulatta
ENSCHIG00000025746	-	59	96.825	ENSMMUG00000015963	-	99	96.825	Macaca_mulatta
ENSCHIG00000025746	-	100	98.940	ENSMNEG00000042856	-	100	98.940	Macaca_nemestrina
ENSCHIG00000025746	-	100	98.940	ENSMLEG00000041178	-	100	98.940	Mandrillus_leucophaeus
ENSCHIG00000025746	-	74	48.235	ENSMAMG00000013840	matr3l1.1	80	36.905	Mastacembelus_armatus
ENSCHIG00000025746	-	100	77.875	ENSMGAG00000001331	-	100	76.206	Meleagris_gallopavo
ENSCHIG00000025746	-	100	98.351	ENSMAUG00000011647	Matr3	100	98.351	Mesocricetus_auratus
ENSCHIG00000025746	-	64	95.430	ENSMICG00000012438	-	99	97.421	Microcebus_murinus
ENSCHIG00000025746	-	100	98.233	ENSMOCG00000015711	Matr3	100	98.233	Microtus_ochrogaster
ENSCHIG00000025746	-	100	91.335	ENSMODG00000011925	-	99	90.749	Monodelphis_domestica
ENSCHIG00000025746	-	100	98.115	MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	Mus_caroli
ENSCHIG00000025746	-	100	98.115	ENSMUSG00000037236	Matr3	100	98.115	Mus_musculus
ENSCHIG00000025746	-	100	98.115	MGP_PahariEiJ_G0018842	Matr3	100	98.115	Mus_pahari
ENSCHIG00000025746	-	100	97.762	MGP_SPRETEiJ_G0023020	Matr3	100	97.762	Mus_spretus
ENSCHIG00000025746	-	100	97.685	ENSMPUG00000009297	-	100	97.685	Mustela_putorius_furo
ENSCHIG00000025746	-	100	97.885	ENSMLUG00000005798	-	99	97.885	Myotis_lucifugus
ENSCHIG00000025746	-	100	98.351	ENSNGAG00000017452	Matr3	100	98.351	Nannospalax_galili
ENSCHIG00000025746	-	100	98.940	ENSNLEG00000009093	-	100	98.940	Nomascus_leucogenys
ENSCHIG00000025746	-	99	90.868	ENSOPRG00000016511	-	100	90.508	Ochotona_princeps
ENSCHIG00000025746	-	100	98.351	ENSODEG00000003015	-	100	98.351	Octodon_degus
ENSCHIG00000025746	-	100	98.940	ENSOCUG00000026311	MATR3	100	98.940	Oryctolagus_cuniculus
ENSCHIG00000025746	-	69	37.879	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
ENSCHIG00000025746	-	64	48.148	ENSORLG00015018551	matr3l1.1	80	33.333	Oryzias_latipes_hsok
ENSCHIG00000025746	-	67	40.351	ENSOMEG00000022287	matr3l1.1	91	36.429	Oryzias_melastigma
ENSCHIG00000025746	-	100	99.176	ENSOGAG00000010607	-	100	99.176	Otolemur_garnettii
ENSCHIG00000025746	-	100	100.000	ENSOARG00000016931	-	99	100.000	Ovis_aries
ENSCHIG00000025746	-	65	92.364	ENSPPAG00000026720	-	99	92.364	Pan_paniscus
ENSCHIG00000025746	-	100	93.423	ENSPPAG00000001418	-	98	97.278	Pan_paniscus
ENSCHIG00000025746	-	100	99.411	ENSPPRG00000008004	-	100	99.411	Panthera_pardus
ENSCHIG00000025746	-	96	99.384	ENSPTIG00000010711	-	100	99.384	Panthera_tigris_altaica
ENSCHIG00000025746	-	100	93.423	ENSPTRG00000017294	MATR3	98	97.278	Pan_troglodytes
ENSCHIG00000025746	-	65	98.182	ENSPANG00000032489	-	99	98.182	Papio_anubis
ENSCHIG00000025746	-	100	97.527	ENSPANG00000012018	-	100	97.527	Papio_anubis
ENSCHIG00000025746	-	96	33.392	ENSPKIG00000000333	matr3l1.1	76	33.524	Paramormyrops_kingsleyae
ENSCHIG00000025746	-	100	77.133	ENSPSIG00000014598	-	100	76.316	Pelodiscus_sinensis
ENSCHIG00000025746	-	100	97.880	ENSPEMG00000020679	Matr3	100	97.880	Peromyscus_maniculatus_bairdii
ENSCHIG00000025746	-	100	93.645	ENSPPYG00000015835	-	100	93.645	Pongo_abelii
ENSCHIG00000025746	-	100	98.469	ENSPCOG00000025718	-	100	98.469	Propithecus_coquereli
ENSCHIG00000025746	-	98	93.644	ENSPVAG00000015431	-	100	93.644	Pteropus_vampyrus
ENSCHIG00000025746	-	100	97.644	ENSRNOG00000019875	Matr3	100	97.644	Rattus_norvegicus
ENSCHIG00000025746	-	65	97.641	ENSRBIG00000034713	-	98	97.641	Rhinopithecus_bieti
ENSCHIG00000025746	-	100	97.291	ENSRROG00000043949	-	100	97.291	Rhinopithecus_roxellana
ENSCHIG00000025746	-	100	96.584	ENSRROG00000039415	-	100	98.630	Rhinopithecus_roxellana
ENSCHIG00000025746	-	100	98.351	ENSSBOG00000030159	-	100	98.351	Saimiri_boliviensis_boliviensis
ENSCHIG00000025746	-	100	91.569	ENSSHAG00000010331	-	99	90.984	Sarcophilus_harrisii
ENSCHIG00000025746	-	61	55.556	ENSSDUG00000015369	matr3l1.1	59	51.515	Seriola_dumerili
ENSCHIG00000025746	-	100	75.655	ENSSPUG00000019236	-	100	75.412	Sphenodon_punctatus
ENSCHIG00000025746	-	100	99.411	ENSSSCG00000014343	-	100	99.411	Sus_scrofa
ENSCHIG00000025746	-	100	76.696	ENSTGUG00000014568	MATR3	100	75.904	Taeniopygia_guttata
ENSCHIG00000025746	-	61	57.143	ENSTNIG00000003166	matr3l1.1	87	57.143	Tetraodon_nigroviridis
ENSCHIG00000025746	-	85	99.166	ENSUAMG00000000097	-	97	99.166	Ursus_americanus
ENSCHIG00000025746	-	100	98.822	ENSUMAG00000015808	-	100	98.822	Ursus_maritimus
ENSCHIG00000025746	-	100	93.548	ENSVPAG00000006337	-	100	93.548	Vicugna_pacos
ENSCHIG00000025746	-	100	99.176	ENSVVUG00000020287	-	100	99.176	Vulpes_vulpes
ENSCHIG00000025746	-	80	59.424	ENSXETG00000003838	matr3	100	51.751	Xenopus_tropicalis