EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCHIG00000025759 (Gene tree)
Gene ID
102184918
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Plus strand
Length
23263 bases
Position
chr13:72845922-72869184
Accession
102184918
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000031374PABPPF00658.184.5e-2311
ENSCHIP00000031374RRM_5PF13893.65.4e-0811
ENSCHIP00000031374RRM_1PF00076.221.3e-8914
ENSCHIP00000031374RRM_1PF00076.221.3e-8924
ENSCHIP00000031374RRM_1PF00076.221.3e-8934
ENSCHIP00000031374RRM_1PF00076.221.3e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000039247PABPC1L-2011947XM_018057914ENSCHIP00000031374648 (aa)XP_017913403UPI000D193C8E
Gene Model
Click here to download ENSCHIG00000025759's gene model file
Pathways
Pathway IDPathway NameSource
chx03013RNA transportKEGG
chx03015mRNA surveillance pathwayKEGG
chx03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025759's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCHIG00000025759PABPC1L5963.784ENSCHIG00000007231PABPC4L9963.784
ENSCHIG00000025759PABPC1L5636.047ENSCHIG00000015379CELF26736.047
ENSCHIG00000025759PABPC1L5730.464ENSCHIG00000025894ELAVL29230.263
ENSCHIG00000025759PABPC1L5860.112ENSCHIG00000019004PABPC59660.055
ENSCHIG00000025759PABPC1L5538.095ENSCHIG00000020214TIA18738.095
ENSCHIG00000025759PABPC1L5331.707ENSCHIG00000002602HNRNPA05032.692
ENSCHIG00000025759PABPC1L5332.447ENSCHIG00000014146RBM286733.516
ENSCHIG00000025759PABPC1L5771.429ENSCHIG00000006283-9871.429
ENSCHIG00000025759PABPC1L5632.530ENSCHIG00000014917RBM195230.055
ENSCHIG00000025759PABPC1L5771.429ENSCHIG00000011138-9871.429
ENSCHIG00000025759PABPC1L5330.128ENSCHIG00000025214-5830.128
ENSCHIG00000025759PABPC1L5330.128ENSCHIG00000008322-5830.128
ENSCHIG00000025759PABPC1L6230.409ENSCHIG00000020810TIAL17830.409
ENSCHIG00000025759PABPC1L8955.369ENSCHIG00000023385-9555.369
ENSCHIG00000025759PABPC1L9169.055ENSCHIG00000023714PABPC19783.838
ENSCHIG00000025759PABPC1L9164.734ENSCHIG00000019398-9764.734
ENSCHIG00000025759PABPC1L5636.508ENSCHIG00000025663-5436.508
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000025759PABPC1L9186.957ENSG00000101104PABPC1L9994.136Homo_sapiens
ENSCHIG00000025759PABPC1L9167.715ENSAPOG00000010842pabpc1l9767.881Acanthochromis_polyacanthus
ENSCHIG00000025759PABPC1L9178.041ENSAMEG00000004099PABPC1L9978.673Ailuropoda_melanoleuca
ENSCHIG00000025759PABPC1L9073.913ENSACIG00000021004-9773.913Amphilophus_citrinellus
ENSCHIG00000025759PABPC1L9167.317ENSAOCG00000006167-9867.476Amphiprion_ocellaris
ENSCHIG00000025759PABPC1L9168.430ENSAPEG00000010558-9882.178Amphiprion_percula
ENSCHIG00000025759PABPC1L9168.482ENSATEG00000007428pabpc1l9868.482Anabas_testudineus
ENSCHIG00000025759PABPC1L9072.924ENSAPLG00000008415PABPC1L9772.862Anas_platyrhynchos
ENSCHIG00000025759PABPC1L9172.964ENSACAG00000011841PABPC1L9772.964Anolis_carolinensis
ENSCHIG00000025759PABPC1L9383.550ENSANAG00000026826PABPC1L9785.284Aotus_nancymaae
ENSCHIG00000025759PABPC1L9166.343ENSACLG00000024791pabpc1l9866.721Astatotilapia_calliptera
ENSCHIG00000025759PABPC1L9170.033ENSAMXG00000013552pabpc1l9870.033Astyanax_mexicanus
ENSCHIG00000025759PABPC1L6482.332ENSBTAG00000016849PABPC1L8582.332Bos_taurus
ENSCHIG00000025759PABPC1L56100.000ENSBTAG00000055300-100100.000Bos_taurus
ENSCHIG00000025759PABPC1L5678.736ENSCJAG00000038506-10078.736Callithrix_jacchus
ENSCHIG00000025759PABPC1L9383.876ENSCJAG00000017628PABPC1L10083.876Callithrix_jacchus
ENSCHIG00000025759PABPC1L9176.369ENSCAFG00000009573PABPC1L9976.369Canis_familiaris
ENSCHIG00000025759PABPC1L9188.423ENSCAFG00020013828PABPC1L9788.423Canis_lupus_dingo
ENSCHIG00000025759PABPC1L9085.160ENSTSYG00000006645PABPC1L9785.160Carlito_syrichta
ENSCHIG00000025759PABPC1L9075.895ENSCAPG00000014519PABPC1L9775.895Cavia_aperea
ENSCHIG00000025759PABPC1L9179.305ENSCPOG00000013633PABPC1L9779.305Cavia_porcellus
ENSCHIG00000025759PABPC1L9185.452ENSCCAG00000023338PABPC1L9785.452Cebus_capucinus
ENSCHIG00000025759PABPC1L9187.291ENSCATG00000034065PABPC1L9787.291Cercocebus_atys
ENSCHIG00000025759PABPC1L9179.636ENSCLAG00000005298PABPC1L9779.967Chinchilla_lanigera
ENSCHIG00000025759PABPC1L9187.124ENSCSAG00000014242PABPC1L9787.124Chlorocebus_sabaeus
ENSCHIG00000025759PABPC1L5081.679ENSCPBG00000007810-8181.679Chrysemys_picta_bellii
ENSCHIG00000025759PABPC1L6883.937ENSCPBG00000017755-9983.937Chrysemys_picta_bellii
ENSCHIG00000025759PABPC1L8949.170ENSCING00000002796-9549.275Ciona_intestinalis
ENSCHIG00000025759PABPC1L9057.358ENSCSAVG00000003102-10082.192Ciona_savignyi
ENSCHIG00000025759PABPC1L9158.252ENSCSAVG00000004246-8768.571Ciona_savignyi
ENSCHIG00000025759PABPC1L9182.702ENSCANG00000037530PABPC1L9782.702Colobus_angolensis_palliatus
ENSCHIG00000025759PABPC1L9373.008ENSCGRG00001021938Pabpc1l10073.008Cricetulus_griseus_chok1gshd
ENSCHIG00000025759PABPC1L9373.008ENSCGRG00000007946Pabpc1l10073.008Cricetulus_griseus_crigri
ENSCHIG00000025759PABPC1L9065.254ENSCSEG00000021295pabpc1l9765.254Cynoglossus_semilaevis
ENSCHIG00000025759PABPC1L9168.099ENSCVAG00000015943-8687.786Cyprinodon_variegatus
ENSCHIG00000025759PABPC1L9169.494ENSDARG00000002597pabpc1l8888.462Danio_rerio
ENSCHIG00000025759PABPC1L9187.291ENSDNOG00000048450PABPC1L9787.291Dasypus_novemcinctus
ENSCHIG00000025759PABPC1L9183.110ENSDORG00000001067Pabpc1l9783.110Dipodomys_ordii
ENSCHIG00000025759PABPC1L8990.650ENSETEG00000009969PABPC1L7390.650Echinops_telfairi
ENSCHIG00000025759PABPC1L5697.024ENSEASG00005023408-10097.024Equus_asinus_asinus
ENSCHIG00000025759PABPC1L5387.222ENSEASG00005023407-7387.222Equus_asinus_asinus
ENSCHIG00000025759PABPC1L6390.308ENSECAG00000040139-8190.308Equus_caballus
ENSCHIG00000025759PABPC1L9182.776ENSEEUG00000005978PABPC1L9782.776Erinaceus_europaeus
ENSCHIG00000025759PABPC1L9168.994ENSELUG00000001811pabpc1l9868.994Esox_lucius
ENSCHIG00000025759PABPC1L9188.758ENSFCAG00000011692PABPC1L9788.758Felis_catus
ENSCHIG00000025759PABPC1L7877.220ENSFALG00000005372PABPC1L8777.220Ficedula_albicollis
ENSCHIG00000025759PABPC1L9180.034ENSFDAG00000008291PABPC1L9780.034Fukomys_damarensis
ENSCHIG00000025759PABPC1L9169.421ENSFHEG00000003398pabpc1l9869.421Fundulus_heteroclitus
ENSCHIG00000025759PABPC1L9168.543ENSGMOG00000004437pabpc1l9768.317Gadus_morhua
ENSCHIG00000025759PABPC1L8671.033ENSGALG00000004123PABPC1L9985.372Gallus_gallus
ENSCHIG00000025759PABPC1L9165.055ENSGAFG00000021057pabpc1l9865.055Gambusia_affinis
ENSCHIG00000025759PABPC1L9166.069ENSGACG00000002792pabpc1l9866.069Gasterosteus_aculeatus
ENSCHIG00000025759PABPC1L9174.551ENSGAGG00000000589PABPC1L9774.551Gopherus_agassizii
ENSCHIG00000025759PABPC1L9186.957ENSGGOG00000004584PABPC1L9786.957Gorilla_gorilla
ENSCHIG00000025759PABPC1L9166.181ENSHBUG00000006134pabpc1l9866.558Haplochromis_burtoni
ENSCHIG00000025759PABPC1L9180.528ENSHGLG00000008434PABPC1L9780.528Heterocephalus_glaber_female
ENSCHIG00000025759PABPC1L9180.528ENSHGLG00100012151PABPC1L9780.528Heterocephalus_glaber_male
ENSCHIG00000025759PABPC1L5683.708ENSHGLG00100019506-10083.708Heterocephalus_glaber_male
ENSCHIG00000025759PABPC1L9167.119ENSHCOG00000009270pabpc1l9867.288Hippocampus_comes
ENSCHIG00000025759PABPC1L5660.920ENSIPUG00000006760-8860.920Ictalurus_punctatus
ENSCHIG00000025759PABPC1L5660.920ENSIPUG00000006780-8560.920Ictalurus_punctatus
ENSCHIG00000025759PABPC1L9170.473ENSIPUG00000012602pabpc1l9870.473Ictalurus_punctatus
ENSCHIG00000025759PABPC1L9186.455ENSSTOG00000003739PABPC1L9786.455Ictidomys_tridecemlineatus
ENSCHIG00000025759PABPC1L8665.945ENSJJAG00000022406Pabpc1l9763.123Jaculus_jaculus
ENSCHIG00000025759PABPC1L9168.159ENSKMAG00000016847pabpc1l9868.159Kryptolebias_marmoratus
ENSCHIG00000025759PABPC1L9167.045ENSLBEG00000010084pabpc1l9867.045Labrus_bergylta
ENSCHIG00000025759PABPC1L9169.243ENSLACG00000005762PABPC1L9872.491Latimeria_chalumnae
ENSCHIG00000025759PABPC1L9170.684ENSLOCG00000007519pabpc1l9770.684Lepisosteus_oculatus
ENSCHIG00000025759PABPC1L9181.789ENSLAFG00000003553PABPC1L9981.789Loxodonta_africana
ENSCHIG00000025759PABPC1L9385.505ENSMFAG00000040365PABPC1L9787.291Macaca_fascicularis
ENSCHIG00000025759PABPC1L9185.025ENSMNEG00000032298PABPC1L9785.025Macaca_nemestrina
ENSCHIG00000025759PABPC1L9187.291ENSMLEG00000043139PABPC1L9787.291Mandrillus_leucophaeus
ENSCHIG00000025759PABPC1L9167.427ENSMAMG00000011854pabpc1l9867.427Mastacembelus_armatus
ENSCHIG00000025759PABPC1L9166.343ENSMZEG00005023713pabpc1l9866.721Maylandia_zebra
ENSCHIG00000025759PABPC1L8874.237ENSMGAG00000003674PABPC1L9773.856Meleagris_gallopavo
ENSCHIG00000025759PABPC1L9174.295ENSMOCG00000013186Pabpc1l9774.295Microtus_ochrogaster
ENSCHIG00000025759PABPC1L9167.700ENSMMOG00000020574-9088.462Mola_mola
ENSCHIG00000025759PABPC1L9078.956ENSMODG00000016198PABPC1L9978.956Monodelphis_domestica
ENSCHIG00000025759PABPC1L9068.204ENSMALG00000021622pabpc1l10068.204Monopterus_albus
ENSCHIG00000025759PABPC1L8774.609MGP_CAROLIEiJ_G0024627Pabpc1l9874.295Mus_caroli
ENSCHIG00000025759PABPC1L8774.609ENSMUSG00000054582Pabpc1l9874.295Mus_musculus
ENSCHIG00000025759PABPC1L8774.479MGP_PahariEiJ_G0026071Pabpc1l9874.172Mus_pahari
ENSCHIG00000025759PABPC1L8774.609MGP_SPRETEiJ_G0025549Pabpc1l9874.295Mus_spretus
ENSCHIG00000025759PABPC1L9186.446ENSMPUG00000017646PABPC1L9786.446Mustela_putorius_furo
ENSCHIG00000025759PABPC1L9179.383ENSMLUG00000006324PABPC1L9779.383Myotis_lucifugus
ENSCHIG00000025759PABPC1L8777.043ENSNGAG00000010458Pabpc1l9975.365Nannospalax_galili
ENSCHIG00000025759PABPC1L9074.038ENSNBRG00000016633pabpc1l9774.038Neolamprologus_brichardi
ENSCHIG00000025759PABPC1L8373.810ENSMEUG00000007905-8973.810Notamacropus_eugenii
ENSCHIG00000025759PABPC1L9183.639ENSOPRG00000011846PABPC1L9783.639Ochotona_princeps
ENSCHIG00000025759PABPC1L8679.323ENSODEG00000015482PABPC1L9679.323Octodon_degus
ENSCHIG00000025759PABPC1L5576.875ENSODEG00000002920-9776.875Octodon_degus
ENSCHIG00000025759PABPC1L9166.883ENSONIG00000017314pabpc1l9866.883Oreochromis_niloticus
ENSCHIG00000025759PABPC1L8367.089ENSOANG00000015793-10067.089Ornithorhynchus_anatinus
ENSCHIG00000025759PABPC1L9175.862ENSOCUG00000003005PABPC1L9876.019Oryctolagus_cuniculus
ENSCHIG00000025759PABPC1L9073.005ENSORLG00000010322pabpc1l9773.005Oryzias_latipes
ENSCHIG00000025759PABPC1L9073.005ENSORLG00020021193pabpc1l9773.005Oryzias_latipes_hni
ENSCHIG00000025759PABPC1L9073.005ENSORLG00015017018pabpc1l9773.005Oryzias_latipes_hsok
ENSCHIG00000025759PABPC1L9164.341ENSOMEG00000010789pabpc1l9864.341Oryzias_melastigma
ENSCHIG00000025759PABPC1L9183.824ENSOGAG00000032999PABPC1L9883.824Otolemur_garnettii
ENSCHIG00000025759PABPC1L9196.321ENSOARG00000004578PABPC1L9796.321Ovis_aries
ENSCHIG00000025759PABPC1L9186.789ENSPPAG00000039677PABPC1L9786.789Pan_paniscus
ENSCHIG00000025759PABPC1L6083.025ENSPPRG00000019327-9883.025Panthera_pardus
ENSCHIG00000025759PABPC1L9088.644ENSPTIG00000006524PABPC1L9888.644Panthera_tigris_altaica
ENSCHIG00000025759PABPC1L6093.827ENSPTRG00000013531PABPC1L9993.827Pan_troglodytes
ENSCHIG00000025759PABPC1L9187.291ENSPANG00000018788PABPC1L9787.291Papio_anubis
ENSCHIG00000025759PABPC1L9170.376ENSPKIG00000007322pabpc1l9870.376Paramormyrops_kingsleyae
ENSCHIG00000025759PABPC1L5083.969ENSPKIG00000016810-9383.969Paramormyrops_kingsleyae
ENSCHIG00000025759PABPC1L6484.892ENSPSIG00000013289PABPC1L9984.892Pelodiscus_sinensis
ENSCHIG00000025759PABPC1L6087.121ENSPMGG00000023117pabpc1l9287.121Periophthalmus_magnuspinnatus
ENSCHIG00000025759PABPC1L6769.430ENSPMGG00000023121-9069.430Periophthalmus_magnuspinnatus
ENSCHIG00000025759PABPC1L9373.290ENSPEMG00000020671Pabpc1l9973.463Peromyscus_maniculatus_bairdii
ENSCHIG00000025759PABPC1L9168.926ENSPFOG00000013241pabpc1l9868.801Poecilia_formosa
ENSCHIG00000025759PABPC1L5089.231ENSPLAG00000023686-9289.231Poecilia_latipinna
ENSCHIG00000025759PABPC1L9168.309ENSPLAG00000017490-9868.309Poecilia_latipinna
ENSCHIG00000025759PABPC1L9169.079ENSPMEG00000007677pabpc1l9869.079Poecilia_mexicana
ENSCHIG00000025759PABPC1L5089.231ENSPMEG00000009185-8889.231Poecilia_mexicana
ENSCHIG00000025759PABPC1L6478.450ENSPREG00000015886pabpc1l9978.450Poecilia_reticulata
ENSCHIG00000025759PABPC1L9187.291ENSPPYG00000011042PABPC1L9787.291Pongo_abelii
ENSCHIG00000025759PABPC1L6095.312ENSPCAG00000011787-7595.312Procavia_capensis
ENSCHIG00000025759PABPC1L9185.117ENSPCOG00000020630PABPC1L9885.117Propithecus_coquereli
ENSCHIG00000025759PABPC1L9185.570ENSPVAG00000012663PABPC1L9885.570Pteropus_vampyrus
ENSCHIG00000025759PABPC1L9074.038ENSPNYG00000004101pabpc1l9774.038Pundamilia_nyererei
ENSCHIG00000025759PABPC1L9162.969ENSPNAG00000021248pabpc1l9862.969Pygocentrus_nattereri
ENSCHIG00000025759PABPC1L8774.081ENSRNOG00000012750Pabpc1l9873.632Rattus_norvegicus
ENSCHIG00000025759PABPC1L9186.957ENSRBIG00000035381PABPC1L9786.957Rhinopithecus_bieti
ENSCHIG00000025759PABPC1L9186.789ENSRROG00000044498PABPC1L9786.789Rhinopithecus_roxellana
ENSCHIG00000025759PABPC1L9384.039ENSSBOG00000009532-9785.786Saimiri_boliviensis_boliviensis
ENSCHIG00000025759PABPC1L9070.833ENSSHAG00000011446PABPC1L9870.833Sarcophilus_harrisii
ENSCHIG00000025759PABPC1L9171.522ENSSFOG00015017304pabpc1l9871.522Scleropages_formosus
ENSCHIG00000025759PABPC1L9167.430ENSSMAG00000010516pabpc1l9888.372Scophthalmus_maximus
ENSCHIG00000025759PABPC1L9168.013ENSSDUG00000014743pabpc1l9868.013Seriola_dumerili
ENSCHIG00000025759PABPC1L9075.240ENSSLDG00000006981pabpc1l9882.297Seriola_lalandi_dorsalis
ENSCHIG00000025759PABPC1L9172.638ENSSPUG00000004233PABPC1L9772.638Sphenodon_punctatus
ENSCHIG00000025759PABPC1L9166.610ENSSPAG00000017137pabpc1l9766.610Stegastes_partitus
ENSCHIG00000025759PABPC1L9188.870ENSSSCG00000007382PABPC1L9888.870Sus_scrofa
ENSCHIG00000025759PABPC1L9073.984ENSTGUG00000005114PABPC1L9773.984Taeniopygia_guttata
ENSCHIG00000025759PABPC1L9267.695ENSTRUG00000011085pabpc1l9967.695Takifugu_rubripes
ENSCHIG00000025759PABPC1L9165.246ENSTNIG00000017903pabpc1l9765.246Tetraodon_nigroviridis
ENSCHIG00000025759PABPC1L8594.863ENSTBEG00000002851PABPC1L7894.863Tupaia_belangeri
ENSCHIG00000025759PABPC1L8888.676ENSTTRG00000007618PABPC1L10088.644Tursiops_truncatus
ENSCHIG00000025759PABPC1L9184.899ENSUAMG00000017682PABPC1L9784.899Ursus_americanus
ENSCHIG00000025759PABPC1L6491.870ENSUMAG00000025436PABPC1L9491.870Ursus_maritimus
ENSCHIG00000025759PABPC1L9094.862ENSVVUG00000018939PABPC1L9694.862Vulpes_vulpes
ENSCHIG00000025759PABPC1L9169.281ENSXETG00000022831pabpc1l9769.281Xenopus_tropicalis
ENSCHIG00000025759PABPC1L9168.309ENSXCOG00000005459pabpc1l9984.397Xiphophorus_couchianus
ENSCHIG00000025759PABPC1L9168.637ENSXMAG00000017135pabpc1l9868.637Xiphophorus_maculatus

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