EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000025862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 5624 bases
Position: chr2:318151-323774
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031551	RRM_1	PF00076.22	8.5e-16	1	2
ENSCHIP00000031551	RRM_1	PF00076.22	8.5e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039430	-	378	-	ENSCHIP00000031556	125 (aa)	-	UPI000D194C71
ENSCHIT00000039433	-	270	-	ENSCHIP00000031559	89 (aa)	-	UPI000D196E0A
ENSCHIT00000039424	-	1473	-	ENSCHIP00000031551	490 (aa)	-	UPI000D19235B

Gene Model

Click here to download ENSCHIG00000025862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000025862	-	92	94.231	ENSCHIG00000024030	HNRNPR	86	78.519
ENSCHIG00000025862	-	97	69.106	ENSCHIG00000024654	SYNCRIP	80	74.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025862	-	91	40.684	FBgn0038826	Syp	53	56.184	Drosophila_melanogaster
ENSCHIG00000025862	-	83	82.258	ENSGMOG00000002822	-	76	82.258	Gadus_morhua
ENSCHIG00000025862	-	53	50.160	ENSGGOG00000036671	-	67	48.193	Gorilla_gorilla
ENSCHIG00000025862	-	78	86.842	ENSMAMG00000004406	-	77	76.190	Mastacembelus_armatus
ENSCHIG00000025862	-	76	78.125	ENSODEG00000004900	-	83	61.878	Octodon_degus
ENSCHIG00000025862	-	79	49.785	ENSODEG00000005445	-	91	48.093	Octodon_degus
ENSCHIG00000025862	-	78	44.398	ENSPTRG00000043439	-	88	60.403	Pan_troglodytes
ENSCHIG00000025862	-	93	94.231	ENSPCOG00000014665	-	63	63.212	Propithecus_coquereli
ENSCHIG00000025862	-	58	81.915	ENSTGUG00000012478	-	64	72.581	Taeniopygia_guttata
ENSCHIG00000025862	-	93	94.231	ENSTBEG00000002251	-	87	78.519	Tupaia_belangeri
ENSCHIG00000025862	-	78	69.106	ENSTTRG00000004471	-	85	64.800	Tursiops_truncatus
ENSCHIG00000025862	-	82	94.231	ENSTTRG00000007752	-	67	78.519	Tursiops_truncatus
ENSCHIG00000025862	-	71	94.231	ENSVPAG00000006411	-	76	94.231	Vicugna_pacos