EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000025863 (Gene tree)
Gene ID: 102177796
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 175421 bases
Position: chr8:42220519-42395939
Accession: 102177796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031642	ResIII	PF04851.15	2.5e-08	1	1
ENSCHIP00000031610	ResIII	PF04851.15	2.5e-08	1	1
ENSCHIP00000031635	ResIII	PF04851.15	2.5e-08	1	1
ENSCHIP00000031635	BRK	PF07533.16	2.9e-17	1	1
ENSCHIP00000031642	BRK	PF07533.16	2.9e-17	1	1
ENSCHIP00000031610	BRK	PF07533.16	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039484	SMARCA2-201	6386	XM_018052037	ENSCHIP00000031610	1554 (aa)	XP_017907526	UPI000847D31B
ENSCHIT00000039516	SMARCA2-204	4650	-	ENSCHIP00000031642	1549 (aa)	-	UPI000D18DE3F
ENSCHIT00000039509	SMARCA2-203	4719	XM_018052034	ENSCHIP00000031635	1572 (aa)	XP_017907523	UPI000846DAC9
ENSCHIT00000039500	SMARCA2-202	2050	XM_018052038	ENSCHIP00000031626	276 (aa)	XP_017907527	UPI000059FD02

Gene Model

Click here to download ENSCHIG00000025863's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx04714	Thermogenesis	KEGG
chx05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000025863	SMARCA2	96	73.363	ENSCHIG00000015318	SMARCA4	98	72.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025863	SMARCA2	100	97.233	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSCHIG00000025863	SMARCA2	100	80.088	ENSAPOG00000002641	SMARCA2	97	80.115	Acanthochromis_polyacanthus
ENSCHIG00000025863	SMARCA2	81	99.296	ENSAMEG00000012325	SMARCA2	100	99.296	Ailuropoda_melanoleuca
ENSCHIG00000025863	SMARCA2	100	80.418	ENSACIG00000015607	SMARCA2	97	80.559	Amphilophus_citrinellus
ENSCHIG00000025863	SMARCA2	100	79.925	ENSAOCG00000009647	-	97	79.859	Amphiprion_ocellaris
ENSCHIG00000025863	SMARCA2	100	80.088	ENSAPEG00000007646	SMARCA2	97	79.987	Amphiprion_percula
ENSCHIG00000025863	SMARCA2	99	80.825	ENSATEG00000006916	SMARCA2	96	81.242	Anabas_testudineus
ENSCHIG00000025863	SMARCA2	89	90.234	ENSAPLG00000013873	SMARCA2	93	90.092	Anas_platyrhynchos
ENSCHIG00000025863	SMARCA2	100	90.979	ENSACAG00000002423	SMARCA2	100	90.467	Anolis_carolinensis
ENSCHIG00000025863	SMARCA2	100	97.417	ENSANAG00000026498	SMARCA2	100	97.417	Aotus_nancymaae
ENSCHIG00000025863	SMARCA2	100	81.737	ENSACLG00000004248	SMARCA2	97	81.586	Astatotilapia_calliptera
ENSCHIG00000025863	SMARCA2	100	82.445	ENSAMXG00000012404	smarca2	97	83.181	Astyanax_mexicanus
ENSCHIG00000025863	SMARCA2	100	99.871	ENSBTAG00000007494	SMARCA2	100	99.871	Bos_taurus
ENSCHIG00000025863	SMARCA2	99	97.436	ENSCJAG00000010710	SMARCA2	100	96.254	Callithrix_jacchus
ENSCHIG00000025863	SMARCA2	100	98.650	ENSCAFG00000002013	SMARCA2	100	98.650	Canis_familiaris
ENSCHIG00000025863	SMARCA2	78	94.659	ENSCAFG00020026802	SMARCA2	98	94.659	Canis_lupus_dingo
ENSCHIG00000025863	SMARCA2	100	96.422	ENSTSYG00000003858	SMARCA2	100	96.422	Carlito_syrichta
ENSCHIG00000025863	SMARCA2	99	93.152	ENSCAPG00000002890	SMARCA2	100	92.264	Cavia_aperea
ENSCHIG00000025863	SMARCA2	100	96.688	ENSCPOG00000005475	SMARCA2	100	96.688	Cavia_porcellus
ENSCHIG00000025863	SMARCA2	100	97.452	ENSCCAG00000030636	SMARCA2	100	97.452	Cebus_capucinus
ENSCHIG00000025863	SMARCA2	100	97.196	ENSCATG00000031470	SMARCA2	100	97.196	Cercocebus_atys
ENSCHIG00000025863	SMARCA2	100	96.698	ENSCLAG00000014484	SMARCA2	100	96.698	Chinchilla_lanigera
ENSCHIG00000025863	SMARCA2	93	97.611	ENSCSAG00000008650	SMARCA2	99	97.611	Chlorocebus_sabaeus
ENSCHIG00000025863	SMARCA2	87	93.068	ENSCHOG00000004316	SMARCA2	87	93.068	Choloepus_hoffmanni
ENSCHIG00000025863	SMARCA2	97	95.191	ENSCPBG00000025463	SMARCA2	100	91.384	Chrysemys_picta_bellii
ENSCHIG00000025863	SMARCA2	100	97.666	ENSCANG00000039597	SMARCA2	100	97.666	Colobus_angolensis_palliatus
ENSCHIG00000025863	SMARCA2	100	89.119	ENSCGRG00001002323	Smarca2	100	89.784	Cricetulus_griseus_chok1gshd
ENSCHIG00000025863	SMARCA2	99	78.143	ENSCSEG00000019311	SMARCA2	97	78.201	Cynoglossus_semilaevis
ENSCHIG00000025863	SMARCA2	84	80.210	ENSCVAG00000016571	SMARCA2	95	80.062	Cyprinodon_variegatus
ENSCHIG00000025863	SMARCA2	100	82.491	ENSDARG00000008904	smarca2	97	82.521	Danio_rerio
ENSCHIG00000025863	SMARCA2	100	96.399	ENSDNOG00000006402	SMARCA2	100	96.399	Dasypus_novemcinctus
ENSCHIG00000025863	SMARCA2	100	96.790	ENSDORG00000014832	Smarca2	100	96.790	Dipodomys_ordii
ENSCHIG00000025863	SMARCA2	86	63.597	ENSEBUG00000002449	-	95	64.521	Eptatretus_burgeri
ENSCHIG00000025863	SMARCA2	94	72.005	ENSEBUG00000011442	-	94	71.853	Eptatretus_burgeri
ENSCHIG00000025863	SMARCA2	100	98.651	ENSEASG00005010312	SMARCA2	100	98.651	Equus_asinus_asinus
ENSCHIG00000025863	SMARCA2	68	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSCHIG00000025863	SMARCA2	92	81.038	ENSELUG00000010318	smarca2	96	79.167	Esox_lucius
ENSCHIG00000025863	SMARCA2	100	98.265	ENSFCAG00000001568	SMARCA2	100	98.265	Felis_catus
ENSCHIG00000025863	SMARCA2	100	92.181	ENSFALG00000010416	SMARCA2	100	92.740	Ficedula_albicollis
ENSCHIG00000025863	SMARCA2	99	95.247	ENSFDAG00000010502	SMARCA2	99	95.226	Fukomys_damarensis
ENSCHIG00000025863	SMARCA2	100	81.246	ENSFHEG00000021250	SMARCA2	97	80.697	Fundulus_heteroclitus
ENSCHIG00000025863	SMARCA2	98	77.964	ENSGMOG00000014229	SMARCA2	97	78.940	Gadus_morhua
ENSCHIG00000025863	SMARCA2	100	93.003	ENSGALG00000010164	SMARCA2	100	92.430	Gallus_gallus
ENSCHIG00000025863	SMARCA2	95	76.435	ENSGAFG00000001164	SMARCA2	93	76.275	Gambusia_affinis
ENSCHIG00000025863	SMARCA2	99	79.593	ENSGACG00000014488	SMARCA2	97	79.053	Gasterosteus_aculeatus
ENSCHIG00000025863	SMARCA2	100	92.176	ENSGAGG00000024412	SMARCA2	100	92.048	Gopherus_agassizii
ENSCHIG00000025863	SMARCA2	100	93.114	ENSGGOG00000000513	SMARCA2	100	93.178	Gorilla_gorilla
ENSCHIG00000025863	SMARCA2	99	81.759	ENSHBUG00000006691	SMARCA2	96	81.555	Haplochromis_burtoni
ENSCHIG00000025863	SMARCA2	99	95.691	ENSHGLG00000005215	SMARCA2	99	95.691	Heterocephalus_glaber_female
ENSCHIG00000025863	SMARCA2	100	96.915	ENSHGLG00100010496	SMARCA2	100	96.915	Heterocephalus_glaber_male
ENSCHIG00000025863	SMARCA2	89	76.204	ENSHCOG00000015348	-	88	86.238	Hippocampus_comes
ENSCHIG00000025863	SMARCA2	100	80.693	ENSIPUG00000011060	smarca2	97	81.765	Ictalurus_punctatus
ENSCHIG00000025863	SMARCA2	100	96.922	ENSSTOG00000006812	SMARCA2	100	96.922	Ictidomys_tridecemlineatus
ENSCHIG00000025863	SMARCA2	100	97.136	ENSJJAG00000010867	Smarca2	100	97.136	Jaculus_jaculus
ENSCHIG00000025863	SMARCA2	100	79.045	ENSKMAG00000015844	-	98	79.414	Kryptolebias_marmoratus
ENSCHIG00000025863	SMARCA2	98	84.005	ENSLOCG00000011499	smarca2	97	83.813	Lepisosteus_oculatus
ENSCHIG00000025863	SMARCA2	100	95.957	ENSLAFG00000014061	SMARCA2	100	95.449	Loxodonta_africana
ENSCHIG00000025863	SMARCA2	100	95.965	ENSMFAG00000003814	SMARCA2	100	95.965	Macaca_fascicularis
ENSCHIG00000025863	SMARCA2	100	97.541	ENSMMUG00000015279	SMARCA2	100	97.541	Macaca_mulatta
ENSCHIG00000025863	SMARCA2	100	96.914	ENSMNEG00000041069	SMARCA2	100	96.914	Macaca_nemestrina
ENSCHIG00000025863	SMARCA2	100	94.890	ENSMLEG00000027418	SMARCA2	100	94.890	Mandrillus_leucophaeus
ENSCHIG00000025863	SMARCA2	100	79.678	ENSMAMG00000003056	SMARCA2	100	80.062	Mastacembelus_armatus
ENSCHIG00000025863	SMARCA2	99	81.918	ENSMZEG00005020709	SMARCA2	96	81.716	Maylandia_zebra
ENSCHIG00000025863	SMARCA2	76	77.689	ENSMGAG00000005160	-	100	77.025	Meleagris_gallopavo
ENSCHIG00000025863	SMARCA2	100	98.038	ENSMICG00000005162	SMARCA2	100	98.038	Microcebus_murinus
ENSCHIG00000025863	SMARCA2	100	96.249	ENSMOCG00000001611	Smarca2	100	96.249	Microtus_ochrogaster
ENSCHIG00000025863	SMARCA2	99	78.613	ENSMMOG00000014196	SMARCA2	97	78.548	Mola_mola
ENSCHIG00000025863	SMARCA2	100	93.203	ENSMODG00000003578	SMARCA2	100	92.889	Monodelphis_domestica
ENSCHIG00000025863	SMARCA2	99	81.647	ENSMALG00000009611	SMARCA2	97	81.362	Monopterus_albus
ENSCHIG00000025863	SMARCA2	100	95.443	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.480	Mus_caroli
ENSCHIG00000025863	SMARCA2	100	95.389	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSCHIG00000025863	SMARCA2	100	95.693	MGP_PahariEiJ_G0014334	Smarca2	100	95.693	Mus_pahari
ENSCHIG00000025863	SMARCA2	100	95.013	MGP_SPRETEiJ_G0023759	Smarca2	99	98.361	Mus_spretus
ENSCHIG00000025863	SMARCA2	81	99.141	ENSMPUG00000005171	SMARCA2	94	99.141	Mustela_putorius_furo
ENSCHIG00000025863	SMARCA2	99	91.824	ENSMLUG00000002342	SMARCA2	99	91.751	Myotis_lucifugus
ENSCHIG00000025863	SMARCA2	99	95.757	ENSNGAG00000000108	Smarca2	99	95.757	Nannospalax_galili
ENSCHIG00000025863	SMARCA2	95	68.480	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSCHIG00000025863	SMARCA2	100	94.703	ENSNLEG00000008575	SMARCA2	100	94.703	Nomascus_leucogenys
ENSCHIG00000025863	SMARCA2	100	86.586	ENSMEUG00000009812	SMARCA2	100	86.268	Notamacropus_eugenii
ENSCHIG00000025863	SMARCA2	100	90.494	ENSOPRG00000013474	SMARCA2	100	90.558	Ochotona_princeps
ENSCHIG00000025863	SMARCA2	99	96.101	ENSODEG00000005452	SMARCA2	99	96.101	Octodon_degus
ENSCHIG00000025863	SMARCA2	99	80.000	ENSONIG00000014163	SMARCA2	97	80.385	Oreochromis_niloticus
ENSCHIG00000025863	SMARCA2	50	94.352	ENSOANG00000008299	-	95	98.113	Ornithorhynchus_anatinus
ENSCHIG00000025863	SMARCA2	100	96.453	ENSOCUG00000006320	SMARCA2	100	96.453	Oryctolagus_cuniculus
ENSCHIG00000025863	SMARCA2	100	79.523	ENSORLG00000020820	SMARCA2	100	79.487	Oryzias_latipes
ENSCHIG00000025863	SMARCA2	100	79.635	ENSORLG00015006289	SMARCA2	100	79.237	Oryzias_latipes_hsok
ENSCHIG00000025863	SMARCA2	99	81.323	ENSOMEG00000009736	-	97	80.787	Oryzias_melastigma
ENSCHIG00000025863	SMARCA2	99	94.036	ENSOGAG00000017053	SMARCA2	99	94.221	Otolemur_garnettii
ENSCHIG00000025863	SMARCA2	100	98.267	ENSOARG00000013265	SMARCA2	100	98.267	Ovis_aries
ENSCHIG00000025863	SMARCA2	100	93.466	ENSPPAG00000038717	SMARCA2	100	94.158	Pan_paniscus
ENSCHIG00000025863	SMARCA2	100	98.329	ENSPPRG00000001879	SMARCA2	100	98.329	Panthera_pardus
ENSCHIG00000025863	SMARCA2	100	95.872	ENSPTRG00000051168	SMARCA2	100	95.872	Pan_troglodytes
ENSCHIG00000025863	SMARCA2	100	90.629	ENSPANG00000025121	SMARCA2	100	90.503	Papio_anubis
ENSCHIG00000025863	SMARCA2	100	83.815	ENSPKIG00000018469	-	100	83.483	Paramormyrops_kingsleyae
ENSCHIG00000025863	SMARCA2	100	91.619	ENSPSIG00000006284	SMARCA2	100	90.835	Pelodiscus_sinensis
ENSCHIG00000025863	SMARCA2	98	75.291	ENSPMGG00000013696	-	97	75.508	Periophthalmus_magnuspinnatus
ENSCHIG00000025863	SMARCA2	100	95.791	ENSPEMG00000019821	Smarca2	100	95.791	Peromyscus_maniculatus_bairdii
ENSCHIG00000025863	SMARCA2	94	72.721	ENSPMAG00000005337	-	94	72.523	Petromyzon_marinus
ENSCHIG00000025863	SMARCA2	100	95.048	ENSPCIG00000015658	SMARCA2	100	94.727	Phascolarctos_cinereus
ENSCHIG00000025863	SMARCA2	100	79.514	ENSPFOG00000001856	SMARCA2	97	79.222	Poecilia_formosa
ENSCHIG00000025863	SMARCA2	99	79.639	ENSPLAG00000017829	SMARCA2	96	78.233	Poecilia_latipinna
ENSCHIG00000025863	SMARCA2	99	79.397	ENSPMEG00000001815	-	97	77.226	Poecilia_mexicana
ENSCHIG00000025863	SMARCA2	100	79.022	ENSPREG00000013800	SMARCA2	96	77.606	Poecilia_reticulata
ENSCHIG00000025863	SMARCA2	100	97.066	ENSPPYG00000019258	SMARCA2	100	97.066	Pongo_abelii
ENSCHIG00000025863	SMARCA2	79	86.100	ENSPCAG00000016969	SMARCA2	78	86.100	Procavia_capensis
ENSCHIG00000025863	SMARCA2	100	95.954	ENSPCOG00000025709	SMARCA2	100	95.954	Propithecus_coquereli
ENSCHIG00000025863	SMARCA2	91	100.000	ENSPVAG00000000901	SMARCA2	95	100.000	Pteropus_vampyrus
ENSCHIG00000025863	SMARCA2	100	77.981	ENSPNYG00000004533	SMARCA2	97	76.810	Pundamilia_nyererei
ENSCHIG00000025863	SMARCA2	99	83.621	ENSPNAG00000014635	smarca2	99	83.662	Pygocentrus_nattereri
ENSCHIG00000025863	SMARCA2	100	95.366	ENSRNOG00000011931	Smarca2	100	95.366	Rattus_norvegicus
ENSCHIG00000025863	SMARCA2	100	95.711	ENSRBIG00000038618	SMARCA2	100	95.711	Rhinopithecus_bieti
ENSCHIG00000025863	SMARCA2	100	96.467	ENSRROG00000019271	SMARCA2	100	96.467	Rhinopithecus_roxellana
ENSCHIG00000025863	SMARCA2	100	94.787	ENSSBOG00000034827	SMARCA2	100	95.105	Saimiri_boliviensis_boliviensis
ENSCHIG00000025863	SMARCA2	100	92.637	ENSSHAG00000007884	SMARCA2	100	92.196	Sarcophilus_harrisii
ENSCHIG00000025863	SMARCA2	91	85.188	ENSSFOG00015014870	SMARCA2	97	86.633	Scleropages_formosus
ENSCHIG00000025863	SMARCA2	100	81.242	ENSSMAG00000013707	SMARCA2	97	81.274	Scophthalmus_maximus
ENSCHIG00000025863	SMARCA2	99	80.784	ENSSDUG00000008852	-	100	78.667	Seriola_dumerili
ENSCHIG00000025863	SMARCA2	99	79.177	ENSSLDG00000025449	SMARCA2	96	79.740	Seriola_lalandi_dorsalis
ENSCHIG00000025863	SMARCA2	95	98.421	ENSSARG00000007888	SMARCA2	95	98.421	Sorex_araneus
ENSCHIG00000025863	SMARCA2	95	86.997	ENSSPUG00000001629	SMARCA2	98	87.195	Sphenodon_punctatus
ENSCHIG00000025863	SMARCA2	100	80.326	ENSSPAG00000020091	-	97	80.090	Stegastes_partitus
ENSCHIG00000025863	SMARCA2	100	99.174	ENSSSCG00000005232	SMARCA2	100	99.174	Sus_scrofa
ENSCHIG00000025863	SMARCA2	100	91.481	ENSTGUG00000005460	SMARCA2	100	90.458	Taeniopygia_guttata
ENSCHIG00000025863	SMARCA2	99	79.748	ENSTRUG00000015619	SMARCA2	97	80.218	Takifugu_rubripes
ENSCHIG00000025863	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSCHIG00000025863	SMARCA2	100	95.362	ENSTTRG00000002033	SMARCA2	100	95.362	Tursiops_truncatus
ENSCHIG00000025863	SMARCA2	89	96.165	ENSUAMG00000024701	SMARCA2	99	96.168	Ursus_americanus
ENSCHIG00000025863	SMARCA2	91	89.120	ENSVPAG00000001204	SMARCA2	100	89.120	Vicugna_pacos
ENSCHIG00000025863	SMARCA2	77	95.746	ENSVVUG00000004598	SMARCA2	99	95.746	Vulpes_vulpes
ENSCHIG00000025863	SMARCA2	100	83.416	ENSXETG00000015299	smarca2	100	82.919	Xenopus_tropicalis
ENSCHIG00000025863	SMARCA2	89	79.435	ENSXCOG00000011073	SMARCA2	97	79.001	Xiphophorus_couchianus
ENSCHIG00000025863	SMARCA2	100	78.814	ENSXMAG00000015611	SMARCA2	99	79.416	Xiphophorus_maculatus