EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000025896 (Gene tree)
Gene ID: 102170478
Gene Symbol: SETD1A
Alias: KIAA0339|KMT2F|Set1
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 22112 bases
Position: chr25:26966481-26988592
Accession: 102170478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031649	RRM_1	PF00076.22	7.3e-06	1	1
ENSCHIP00000031638	RRM_1	PF00076.22	7.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039523	SETD1A-202	5079	-	ENSCHIP00000031649	1692 (aa)	-	UPI000D18B8A1
ENSCHIT00000039512	SETD1A-201	5142	XM_018040020	ENSCHIP00000031638	1708 (aa)	XP_017895509	UPI0008471082

Gene Model

Click here to download ENSCHIG00000025896's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025896	SETD1A	100	92.236	ENSG00000099381	SETD1A	100	92.267	Homo_sapiens
ENSCHIG00000025896	SETD1A	53	67.532	ENSATEG00000021563	setd1ba	52	68.874	Anabas_testudineus
ENSCHIG00000025896	SETD1A	65	69.968	ENSAPLG00000005217	SETD1B	54	70.861	Anas_platyrhynchos
ENSCHIG00000025896	SETD1A	100	98.596	ENSBTAG00000002345	SETD1A	100	98.596	Bos_taurus
ENSCHIG00000025896	SETD1A	100	91.312	ENSCJAG00000003000	SETD1A	100	91.254	Callithrix_jacchus
ENSCHIG00000025896	SETD1A	100	93.120	ENSCAFG00000016758	SETD1A	100	93.353	Canis_familiaris
ENSCHIG00000025896	SETD1A	100	93.648	ENSCAFG00020018051	SETD1A	100	93.823	Canis_lupus_dingo
ENSCHIG00000025896	SETD1A	100	91.074	ENSCPOG00000025456	SETD1A	100	91.424	Cavia_porcellus
ENSCHIG00000025896	SETD1A	100	91.424	ENSCCAG00000025600	SETD1A	100	91.540	Cebus_capucinus
ENSCHIG00000025896	SETD1A	100	91.550	ENSCATG00000035417	SETD1A	100	91.637	Cercocebus_atys
ENSCHIG00000025896	SETD1A	100	90.047	ENSCLAG00000011583	SETD1A	100	97.976	Chinchilla_lanigera
ENSCHIG00000025896	SETD1A	100	91.920	ENSCSAG00000005791	SETD1A	100	91.979	Chlorocebus_sabaeus
ENSCHIG00000025896	SETD1A	52	69.281	ENSCPBG00000026067	SETD1B	56	70.508	Chrysemys_picta_bellii
ENSCHIG00000025896	SETD1A	100	89.088	ENSCGRG00001022425	-	100	89.203	Cricetulus_griseus_chok1gshd
ENSCHIG00000025896	SETD1A	100	89.145	ENSCGRG00000016965	-	100	89.261	Cricetulus_griseus_crigri
ENSCHIG00000025896	SETD1A	100	94.399	ENSFCAG00000002588	SETD1A	100	94.516	Felis_catus
ENSCHIG00000025896	SETD1A	55	68.932	ENSGACG00000017002	setd1ba	56	68.874	Gasterosteus_aculeatus
ENSCHIG00000025896	SETD1A	100	90.251	ENSGGOG00000016052	SETD1A	100	90.601	Gorilla_gorilla
ENSCHIG00000025896	SETD1A	100	93.524	ENSSTOG00000005369	SETD1A	100	93.466	Ictidomys_tridecemlineatus
ENSCHIG00000025896	SETD1A	100	90.129	ENSLAFG00000023335	SETD1A	100	90.552	Loxodonta_africana
ENSCHIG00000025896	SETD1A	100	91.754	ENSMFAG00000003435	SETD1A	100	91.871	Macaca_fascicularis
ENSCHIG00000025896	SETD1A	100	91.843	ENSMMUG00000003233	SETD1A	100	96.761	Macaca_mulatta
ENSCHIG00000025896	SETD1A	100	91.487	ENSMLEG00000030176	SETD1A	100	91.516	Mandrillus_leucophaeus
ENSCHIG00000025896	SETD1A	100	92.936	ENSMICG00000001575	SETD1A	100	92.761	Microcebus_murinus
ENSCHIG00000025896	SETD1A	100	89.037	ENSMOCG00000012528	-	100	89.153	Microtus_ochrogaster
ENSCHIG00000025896	SETD1A	100	90.621	ENSPPRG00000012737	SETD1A	100	90.680	Panthera_pardus
ENSCHIG00000025896	SETD1A	100	92.061	ENSPTRG00000008024	SETD1A	100	92.091	Pan_troglodytes
ENSCHIG00000025896	SETD1A	100	90.967	ENSPANG00000025141	SETD1A	100	90.936	Papio_anubis
ENSCHIG00000025896	SETD1A	52	68.301	ENSPKIG00000023115	setd1ba	57	68.525	Paramormyrops_kingsleyae
ENSCHIG00000025896	SETD1A	100	87.522	ENSPEMG00000024243	-	100	95.935	Peromyscus_maniculatus_bairdii
ENSCHIG00000025896	SETD1A	100	91.710	ENSPCOG00000020896	SETD1A	100	92.002	Propithecus_coquereli
ENSCHIG00000025896	SETD1A	100	88.728	ENSRNOG00000055028	Setd1a	100	89.133	Rattus_norvegicus
ENSCHIG00000025896	SETD1A	100	90.696	ENSSBOG00000020392	SETD1A	100	91.223	Saimiri_boliviensis_boliviensis
ENSCHIG00000025896	SETD1A	64	68.954	ENSTNIG00000009090	setd1ba	60	68.954	Tetraodon_nigroviridis
ENSCHIG00000025896	SETD1A	100	95.436	ENSTTRG00000015493	SETD1A	100	95.436	Tursiops_truncatus