EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000025903 (Gene tree)
Gene ID: 102171773
Gene Symbol: -
Alias: -
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 68567 bases
Position: chr6:69477857-69546423
Accession: 102171773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031634	Fip1	PF05182.13	3e-25	1	1
ENSCHIP00000031620	Fip1	PF05182.13	3.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039508	-	2344	XM_005681619	ENSCHIP00000031634	553 (aa)	XP_005681676	UPI0003AFC50E
ENSCHIT00000039494	-	2389	XM_005681616	ENSCHIP00000031620	568 (aa)	XP_005681673	UPI0003AFCCB1

Gene Model

Click here to download ENSCHIG00000025903's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025903	-	72	79.787	ENSACIG00000001454	fip1l1b	73	60.563	Amphilophus_citrinellus
ENSCHIG00000025903	-	99	57.458	ENSAOCG00000021043	fip1l1b	84	58.717	Amphiprion_ocellaris
ENSCHIG00000025903	-	99	57.458	ENSAPEG00000022229	fip1l1b	84	58.717	Amphiprion_percula
ENSCHIG00000025903	-	99	60.839	ENSATEG00000021757	fip1l1b	83	60.291	Anabas_testudineus
ENSCHIG00000025903	-	93	72.595	ENSAPLG00000003042	-	98	72.595	Anas_platyrhynchos
ENSCHIG00000025903	-	99	59.965	ENSACLG00000010418	fip1l1b	83	59.667	Astatotilapia_calliptera
ENSCHIG00000025903	-	56	53.488	ENSAMXG00000011126	fip1l1b	74	60.843	Astyanax_mexicanus
ENSCHIG00000025903	-	59	39.349	ENSAMXG00000031045	fip1l1a	54	43.458	Astyanax_mexicanus
ENSCHIG00000025903	-	100	99.296	ENSBTAG00000020653	FIP1L1	100	99.296	Bos_taurus
ENSCHIG00000025903	-	93	79.922	ENSCAPG00000009569	-	90	80.117	Cavia_aperea
ENSCHIG00000025903	-	96	92.634	ENSCPOG00000010770	-	100	92.634	Cavia_porcellus
ENSCHIG00000025903	-	100	88.040	ENSCPBG00000025019	-	100	86.306	Chrysemys_picta_bellii
ENSCHIG00000025903	-	100	91.228	ENSCGRG00001018568	Fip1l1	100	91.930	Cricetulus_griseus_chok1gshd
ENSCHIG00000025903	-	100	91.228	ENSCGRG00000000208	Fip1l1	100	91.930	Cricetulus_griseus_crigri
ENSCHIG00000025903	-	99	59.051	ENSCSEG00000006583	fip1l1b	83	61.506	Cynoglossus_semilaevis
ENSCHIG00000025903	-	99	58.997	ENSCVAG00000023435	fip1l1b	83	59.129	Cyprinodon_variegatus
ENSCHIG00000025903	-	88	38.493	ENSDARG00000043328	fip1l1a	60	45.082	Danio_rerio
ENSCHIG00000025903	-	92	73.953	ENSETEG00000018271	-	100	73.224	Echinops_telfairi
ENSCHIG00000025903	-	100	94.756	ENSEASG00005019566	-	100	94.756	Equus_asinus_asinus
ENSCHIG00000025903	-	74	85.819	ENSEEUG00000004965	-	71	85.575	Erinaceus_europaeus
ENSCHIG00000025903	-	99	57.949	ENSFHEG00000003843	fip1l1b	70	59.951	Fundulus_heteroclitus
ENSCHIG00000025903	-	99	51.100	ENSGMOG00000004913	fip1l1b	88	51.473	Gadus_morhua
ENSCHIG00000025903	-	63	35.511	ENSGMOG00000012065	-	56	36.444	Gadus_morhua
ENSCHIG00000025903	-	100	82.703	ENSGALG00000013943	-	100	82.883	Gallus_gallus
ENSCHIG00000025903	-	99	58.362	ENSGAFG00000008253	fip1l1b	82	59.100	Gambusia_affinis
ENSCHIG00000025903	-	100	88.040	ENSGAGG00000009763	-	100	86.667	Gopherus_agassizii
ENSCHIG00000025903	-	50	50.502	ENSGAGG00000017677	-	55	56.444	Gopherus_agassizii
ENSCHIG00000025903	-	99	59.965	ENSHBUG00000013978	fip1l1b	87	58.116	Haplochromis_burtoni
ENSCHIG00000025903	-	99	59.722	ENSHCOG00000015834	fip1l1b	83	60.331	Hippocampus_comes
ENSCHIG00000025903	-	96	51.579	ENSIPUG00000022454	fip1l1b	93	48.182	Ictalurus_punctatus
ENSCHIG00000025903	-	99	57.565	ENSKMAG00000021938	fip1l1b	83	58.420	Kryptolebias_marmoratus
ENSCHIG00000025903	-	99	57.601	ENSLOCG00000014127	fip1l1b	96	57.218	Lepisosteus_oculatus
ENSCHIG00000025903	-	99	58.609	ENSMAMG00000004535	fip1l1b	83	60.000	Mastacembelus_armatus
ENSCHIG00000025903	-	99	59.965	ENSMZEG00005023828	fip1l1b	83	59.667	Maylandia_zebra
ENSCHIG00000025903	-	93	78.988	ENSMGAG00000011885	-	87	77.291	Meleagris_gallopavo
ENSCHIG00000025903	-	100	86.316	ENSMAUG00000010526	Fip1l1	100	86.911	Mesocricetus_auratus
ENSCHIG00000025903	-	100	88.246	ENSMOCG00000008020	Fip1l1	100	85.809	Microtus_ochrogaster
ENSCHIG00000025903	-	83	87.475	ENSMODG00000020654	-	93	87.475	Monodelphis_domestica
ENSCHIG00000025903	-	99	49.656	ENSMALG00000000838	fip1l1b	81	58.025	Monopterus_albus
ENSCHIG00000025903	-	100	91.228	MGP_CAROLIEiJ_G0027304	Fip1l1	100	91.930	Mus_caroli
ENSCHIG00000025903	-	100	91.228	ENSMUSG00000029227	Fip1l1	100	91.930	Mus_musculus
ENSCHIG00000025903	-	100	91.228	MGP_PahariEiJ_G0017085	Fip1l1	100	91.930	Mus_pahari
ENSCHIG00000025903	-	100	91.228	MGP_SPRETEiJ_G0028299	Fip1l1	100	91.930	Mus_spretus
ENSCHIG00000025903	-	100	93.310	ENSNGAG00000008849	Fip1l1	100	93.310	Nannospalax_galili
ENSCHIG00000025903	-	99	58.305	ENSNBRG00000017832	fip1l1b	84	57.715	Neolamprologus_brichardi
ENSCHIG00000025903	-	99	57.966	ENSONIG00000008785	fip1l1b	84	57.315	Oreochromis_niloticus
ENSCHIG00000025903	-	93	78.891	ENSOANG00000003384	-	98	77.639	Ornithorhynchus_anatinus
ENSCHIG00000025903	-	99	59.686	ENSORLG00000004397	fip1l1b	99	55.323	Oryzias_latipes
ENSCHIG00000025903	-	99	59.686	ENSORLG00020008716	fip1l1b	83	58.125	Oryzias_latipes_hni
ENSCHIG00000025903	-	99	59.686	ENSORLG00015006736	fip1l1b	83	58.125	Oryzias_latipes_hsok
ENSCHIG00000025903	-	99	44.501	ENSOMEG00000015730	fip1l1b	69	62.162	Oryzias_melastigma
ENSCHIG00000025903	-	95	98.095	ENSOARG00000018767	-	100	97.967	Ovis_aries
ENSCHIG00000025903	-	100	91.053	ENSPEMG00000002025	Fip1l1	100	91.754	Peromyscus_maniculatus_bairdii
ENSCHIG00000025903	-	53	80.060	ENSPCIG00000019318	-	93	79.758	Phascolarctos_cinereus
ENSCHIG00000025903	-	99	54.669	ENSPFOG00000014745	fip1l1b	83	58.367	Poecilia_formosa
ENSCHIG00000025903	-	99	55.254	ENSPLAG00000010954	fip1l1b	83	58.859	Poecilia_latipinna
ENSCHIG00000025903	-	99	54.839	ENSPMEG00000019187	fip1l1b	83	58.571	Poecilia_mexicana
ENSCHIG00000025903	-	74	51.313	ENSPREG00000012535	fip1l1b	69	55.621	Poecilia_reticulata
ENSCHIG00000025903	-	69	98.214	ENSPVAG00000000716	-	71	98.214	Pteropus_vampyrus
ENSCHIG00000025903	-	56	51.884	ENSPNYG00000015976	fip1l1b	58	59.016	Pundamilia_nyererei
ENSCHIG00000025903	-	60	41.813	ENSPNAG00000009853	fip1l1a	53	46.226	Pygocentrus_nattereri
ENSCHIG00000025903	-	100	88.596	ENSRNOG00000002275	Fip1l1	100	86.469	Rattus_norvegicus
ENSCHIG00000025903	-	95	86.323	ENSSHAG00000015789	-	96	86.501	Sarcophilus_harrisii
ENSCHIG00000025903	-	53	46.154	ENSSFOG00015010948	-	55	51.528	Scleropages_formosus
ENSCHIG00000025903	-	99	58.144	ENSSMAG00000013444	fip1l1b	83	62.917	Scophthalmus_maximus
ENSCHIG00000025903	-	99	58.916	ENSSDUG00000004117	fip1l1b	83	60.291	Seriola_dumerili
ENSCHIG00000025903	-	99	59.194	ENSSLDG00000024099	fip1l1b	83	64.375	Seriola_lalandi_dorsalis
ENSCHIG00000025903	-	88	97.449	ENSSARG00000001973	-	90	97.449	Sorex_araneus
ENSCHIG00000025903	-	52	68.621	ENSSPUG00000017328	-	92	69.180	Sphenodon_punctatus
ENSCHIG00000025903	-	99	56.949	ENSSPAG00000017564	fip1l1b	84	58.116	Stegastes_partitus
ENSCHIG00000025903	-	93	76.402	ENSTGUG00000007834	-	88	74.603	Taeniopygia_guttata
ENSCHIG00000025903	-	99	55.410	ENSTNIG00000004104	fip1l1b	73	54.382	Tetraodon_nigroviridis
ENSCHIG00000025903	-	58	100.000	ENSTBEG00000007839	-	71	100.000	Tupaia_belangeri
ENSCHIG00000025903	-	93	96.117	ENSUMAG00000002758	-	100	96.117	Ursus_maritimus
ENSCHIG00000025903	-	83	97.449	ENSVPAG00000011574	-	89	97.449	Vicugna_pacos
ENSCHIG00000025903	-	99	58.603	ENSXMAG00000017620	fip1l1b	83	59.100	Xiphophorus_maculatus