EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000026027 (Gene tree)
Gene ID: 102184008
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 8233 bases
Position: chr22:16704314-16712546
Accession: 102184008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031810	PseudoU_synth_2	PF00849.22	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039684	RPUSD3-201	1002	XM_018066928	ENSCHIP00000031810	333 (aa)	XP_017922417	UPI000D19349C

Gene Model

Click here to download ENSCHIG00000026027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000026027	RPUSD3	82	32.056	ENSCHIG00000009975	RPUSD4	71	32.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026027	RPUSD3	100	80.814	ENSG00000156990	RPUSD3	98	80.814	Homo_sapiens
ENSCHIG00000026027	RPUSD3	100	78.198	ENSAMEG00000016227	RPUSD3	98	78.198	Ailuropoda_melanoleuca
ENSCHIG00000026027	RPUSD3	95	50.909	ENSACAG00000009836	RPUSD3	92	50.909	Anolis_carolinensis
ENSCHIG00000026027	RPUSD3	55	82.065	ENSANAG00000038118	-	88	82.065	Aotus_nancymaae
ENSCHIG00000026027	RPUSD3	55	84.699	ENSANAG00000019945	-	73	84.699	Aotus_nancymaae
ENSCHIG00000026027	RPUSD3	77	57.143	ENSANAG00000007127	-	96	56.158	Aotus_nancymaae
ENSCHIG00000026027	RPUSD3	100	93.314	ENSBTAG00000007968	RPUSD3	100	93.314	Bos_taurus
ENSCHIG00000026027	RPUSD3	100	79.070	ENSCAFG00000029733	RPUSD3	98	79.070	Canis_familiaris
ENSCHIG00000026027	RPUSD3	100	79.070	ENSCAFG00020008582	RPUSD3	98	79.070	Canis_lupus_dingo
ENSCHIG00000026027	RPUSD3	100	73.276	ENSTSYG00000009994	RPUSD3	99	73.276	Carlito_syrichta
ENSCHIG00000026027	RPUSD3	79	79.848	ENSCAPG00000017559	RPUSD3	99	79.848	Cavia_aperea
ENSCHIG00000026027	RPUSD3	97	71.341	ENSCPOG00000037956	RPUSD3	89	71.341	Cavia_porcellus
ENSCHIG00000026027	RPUSD3	100	78.779	ENSCCAG00000029530	RPUSD3	98	78.779	Cebus_capucinus
ENSCHIG00000026027	RPUSD3	100	81.395	ENSCATG00000036939	RPUSD3	98	81.395	Cercocebus_atys
ENSCHIG00000026027	RPUSD3	100	81.105	ENSCSAG00000010506	RPUSD3	98	81.105	Chlorocebus_sabaeus
ENSCHIG00000026027	RPUSD3	53	84.821	ENSCHOG00000010151	-	67	84.821	Choloepus_hoffmanni
ENSCHIG00000026027	RPUSD3	63	55.238	ENSCPBG00000008825	RPUSD3	95	53.876	Chrysemys_picta_bellii
ENSCHIG00000026027	RPUSD3	100	81.105	ENSCANG00000040711	RPUSD3	98	81.105	Colobus_angolensis_palliatus
ENSCHIG00000026027	RPUSD3	100	71.512	ENSCGRG00001004923	Rpusd3	95	71.512	Cricetulus_griseus_chok1gshd
ENSCHIG00000026027	RPUSD3	100	71.512	ENSCGRG00000018315	Rpusd3	100	71.512	Cricetulus_griseus_crigri
ENSCHIG00000026027	RPUSD3	99	74.854	ENSDNOG00000039160	RPUSD3	90	74.854	Dasypus_novemcinctus
ENSCHIG00000026027	RPUSD3	99	63.609	ENSDORG00000026827	Rpusd3	99	63.609	Dipodomys_ordii
ENSCHIG00000026027	RPUSD3	100	70.058	ENSETEG00000006538	RPUSD3	97	70.058	Echinops_telfairi
ENSCHIG00000026027	RPUSD3	61	38.350	ENSEBUG00000015605	RPUSD3	67	38.350	Eptatretus_burgeri
ENSCHIG00000026027	RPUSD3	100	78.779	ENSEASG00005014160	RPUSD3	96	78.779	Equus_asinus_asinus
ENSCHIG00000026027	RPUSD3	100	79.651	ENSECAG00000019988	RPUSD3	96	79.651	Equus_caballus
ENSCHIG00000026027	RPUSD3	98	57.267	ENSEEUG00000007353	RPUSD3	96	57.267	Erinaceus_europaeus
ENSCHIG00000026027	RPUSD3	100	80.523	ENSFCAG00000014199	RPUSD3	98	80.523	Felis_catus
ENSCHIG00000026027	RPUSD3	81	48.718	ENSFALG00000012968	RPUSD3	99	48.162	Ficedula_albicollis
ENSCHIG00000026027	RPUSD3	79	80.916	ENSFDAG00000008350	RPUSD3	81	80.916	Fukomys_damarensis
ENSCHIG00000026027	RPUSD3	65	58.796	ENSGAGG00000007493	RPUSD3	82	56.654	Gopherus_agassizii
ENSCHIG00000026027	RPUSD3	99	81.471	ENSGGOG00000013120	RPUSD3	98	80.814	Gorilla_gorilla
ENSCHIG00000026027	RPUSD3	83	80.866	ENSHGLG00000011722	RPUSD3	71	80.866	Heterocephalus_glaber_female
ENSCHIG00000026027	RPUSD3	83	80.866	ENSHGLG00100016038	RPUSD3	71	80.866	Heterocephalus_glaber_male
ENSCHIG00000026027	RPUSD3	100	75.000	ENSSTOG00000002125	RPUSD3	98	75.000	Ictidomys_tridecemlineatus
ENSCHIG00000026027	RPUSD3	100	71.221	ENSJJAG00000012679	Rpusd3	100	71.221	Jaculus_jaculus
ENSCHIG00000026027	RPUSD3	100	77.907	ENSLAFG00000017501	RPUSD3	100	77.907	Loxodonta_africana
ENSCHIG00000026027	RPUSD3	100	81.105	ENSMFAG00000032407	RPUSD3	98	81.105	Macaca_fascicularis
ENSCHIG00000026027	RPUSD3	100	77.035	ENSMMUG00000010628	RPUSD3	97	83.654	Macaca_mulatta
ENSCHIG00000026027	RPUSD3	100	80.814	ENSMNEG00000040308	RPUSD3	98	80.814	Macaca_nemestrina
ENSCHIG00000026027	RPUSD3	100	81.395	ENSMLEG00000033940	RPUSD3	98	81.395	Mandrillus_leucophaeus
ENSCHIG00000026027	RPUSD3	100	71.512	ENSMAUG00000015473	Rpusd3	100	71.512	Mesocricetus_auratus
ENSCHIG00000026027	RPUSD3	100	75.872	ENSMICG00000002315	RPUSD3	100	75.872	Microcebus_murinus
ENSCHIG00000026027	RPUSD3	99	72.141	ENSMOCG00000022613	Rpusd3	99	72.141	Microtus_ochrogaster
ENSCHIG00000026027	RPUSD3	87	60.208	ENSMODG00000005210	RPUSD3	76	60.417	Monodelphis_domestica
ENSCHIG00000026027	RPUSD3	100	71.221	MGP_CAROLIEiJ_G0028725	Rpusd3	99	73.783	Mus_caroli
ENSCHIG00000026027	RPUSD3	100	72.093	ENSMUSG00000051169	Rpusd3	99	74.157	Mus_musculus
ENSCHIG00000026027	RPUSD3	100	71.221	MGP_PahariEiJ_G0022476	Rpusd3	100	71.221	Mus_pahari
ENSCHIG00000026027	RPUSD3	100	71.221	MGP_SPRETEiJ_G0029753	Rpusd3	99	73.034	Mus_spretus
ENSCHIG00000026027	RPUSD3	100	76.453	ENSMPUG00000017132	RPUSD3	98	76.453	Mustela_putorius_furo
ENSCHIG00000026027	RPUSD3	100	80.233	ENSMLUG00000006135	RPUSD3	99	80.233	Myotis_lucifugus
ENSCHIG00000026027	RPUSD3	99	71.848	ENSNGAG00000023704	Rpusd3	99	71.848	Nannospalax_galili
ENSCHIG00000026027	RPUSD3	100	66.860	ENSNLEG00000004214	RPUSD3	95	82.178	Nomascus_leucogenys
ENSCHIG00000026027	RPUSD3	78	63.602	ENSMEUG00000013098	-	100	63.602	Notamacropus_eugenii
ENSCHIG00000026027	RPUSD3	100	59.302	ENSOPRG00000002300	RPUSD3	98	59.302	Ochotona_princeps
ENSCHIG00000026027	RPUSD3	79	77.652	ENSODEG00000018137	RPUSD3	91	77.652	Octodon_degus
ENSCHIG00000026027	RPUSD3	86	48.951	ENSOANG00000012081	-	99	48.951	Ornithorhynchus_anatinus
ENSCHIG00000026027	RPUSD3	100	67.246	ENSOCUG00000027885	RPUSD3	100	67.246	Oryctolagus_cuniculus
ENSCHIG00000026027	RPUSD3	91	80.255	ENSOGAG00000012592	RPUSD3	100	80.255	Otolemur_garnettii
ENSCHIG00000026027	RPUSD3	100	96.221	ENSOARG00000005928	RPUSD3	98	96.221	Ovis_aries
ENSCHIG00000026027	RPUSD3	99	80.882	ENSPPAG00000038083	RPUSD3	97	80.882	Pan_paniscus
ENSCHIG00000026027	RPUSD3	100	80.233	ENSPPRG00000024433	RPUSD3	98	80.233	Panthera_pardus
ENSCHIG00000026027	RPUSD3	100	81.395	ENSPTIG00000006828	RPUSD3	100	81.395	Panthera_tigris_altaica
ENSCHIG00000026027	RPUSD3	99	80.882	ENSPTRG00000051760	RPUSD3	97	80.882	Pan_troglodytes
ENSCHIG00000026027	RPUSD3	100	81.977	ENSPANG00000023885	RPUSD3	98	81.977	Papio_anubis
ENSCHIG00000026027	RPUSD3	100	72.093	ENSPEMG00000017245	Rpusd3	100	72.093	Peromyscus_maniculatus_bairdii
ENSCHIG00000026027	RPUSD3	88	62.585	ENSPCIG00000021901	RPUSD3	85	62.799	Phascolarctos_cinereus
ENSCHIG00000026027	RPUSD3	100	81.105	ENSPPYG00000013676	RPUSD3	98	81.105	Pongo_abelii
ENSCHIG00000026027	RPUSD3	81	60.357	ENSPCAG00000013731	-	96	60.357	Procavia_capensis
ENSCHIG00000026027	RPUSD3	100	79.942	ENSPCOG00000018314	RPUSD3	98	79.942	Propithecus_coquereli
ENSCHIG00000026027	RPUSD3	100	78.198	ENSPVAG00000011107	RPUSD3	98	78.198	Pteropus_vampyrus
ENSCHIG00000026027	RPUSD3	100	68.657	ENSRNOG00000009084	Rpusd3	100	68.657	Rattus_norvegicus
ENSCHIG00000026027	RPUSD3	98	82.544	ENSRBIG00000041230	RPUSD3	95	84.158	Rhinopithecus_bieti
ENSCHIG00000026027	RPUSD3	98	82.544	ENSRROG00000043328	RPUSD3	95	84.158	Rhinopithecus_roxellana
ENSCHIG00000026027	RPUSD3	100	77.907	ENSSBOG00000036106	RPUSD3	98	77.907	Saimiri_boliviensis_boliviensis
ENSCHIG00000026027	RPUSD3	90	58.472	ENSSHAG00000015536	RPUSD3	97	58.472	Sarcophilus_harrisii
ENSCHIG00000026027	RPUSD3	100	80.233	ENSSSCG00000011555	RPUSD3	98	80.233	Sus_scrofa
ENSCHIG00000026027	RPUSD3	65	50.230	ENSTGUG00000008744	RPUSD3	93	50.230	Taeniopygia_guttata
ENSCHIG00000026027	RPUSD3	81	76.868	ENSTBEG00000000176	RPUSD3	97	76.868	Tupaia_belangeri
ENSCHIG00000026027	RPUSD3	100	83.430	ENSTTRG00000007544	RPUSD3	98	83.430	Tursiops_truncatus
ENSCHIG00000026027	RPUSD3	91	79.618	ENSUAMG00000011354	RPUSD3	98	79.618	Ursus_americanus
ENSCHIG00000026027	RPUSD3	100	78.488	ENSUMAG00000018830	RPUSD3	98	78.488	Ursus_maritimus
ENSCHIG00000026027	RPUSD3	100	78.779	ENSVVUG00000023735	RPUSD3	100	78.779	Vulpes_vulpes
ENSCHIG00000026027	RPUSD3	84	49.645	ENSXETG00000023546	rpusd3	99	49.645	Xenopus_tropicalis