EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000026127 (Gene tree)
Gene ID: 102187942
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 29461 bases
Position: chr7:66862306-66891766
Accession: 102187942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000032043	ResIII	PF04851.15	7.6e-06	1	1
ENSCHIP00000032032	ResIII	PF04851.15	7.7e-06	1	1
ENSCHIP00000032007	ResIII	PF04851.15	7.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039882	SBNO2-201	6405	XM_018050464	ENSCHIP00000032007	1377 (aa)	XP_017905953	UPI0006B1352C
ENSCHIT00000039918	SBNO2-203	4005	XM_018050467	ENSCHIP00000032043	1334 (aa)	XP_017905956	UPI000D191A9F
ENSCHIT00000039907	SBNO2-202	4134	-	ENSCHIP00000032032	1353 (aa)	-	UPI000D190A93

Gene Model

Click here to download ENSCHIG00000026127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000026127	SBNO2	71	67.574	ENSCHIG00000008382	SBNO1	82	57.427

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026127	SBNO2	100	85.188	ENSG00000064932	SBNO2	97	87.696	Homo_sapiens
ENSCHIG00000026127	SBNO2	90	66.428	ENSAPOG00000003185	si:ch73-63e15.2	88	68.276	Acanthochromis_polyacanthus
ENSCHIG00000026127	SBNO2	90	66.508	ENSAOCG00000016581	si:ch73-63e15.2	93	70.954	Amphiprion_ocellaris
ENSCHIG00000026127	SBNO2	90	66.428	ENSAPEG00000008862	si:ch73-63e15.2	75	70.252	Amphiprion_percula
ENSCHIG00000026127	SBNO2	90	65.550	ENSATEG00000023838	si:ch73-63e15.2	93	70.860	Anabas_testudineus
ENSCHIG00000026127	SBNO2	95	72.286	ENSAPLG00000007158	SBNO2	100	72.252	Anas_platyrhynchos
ENSCHIG00000026127	SBNO2	100	83.382	ENSANAG00000026685	SBNO2	97	85.502	Aotus_nancymaae
ENSCHIG00000026127	SBNO2	86	69.151	ENSACLG00000005090	si:ch73-63e15.2	78	65.193	Astatotilapia_calliptera
ENSCHIG00000026127	SBNO2	90	65.308	ENSAMXG00000015881	si:ch73-63e15.2	82	69.318	Astyanax_mexicanus
ENSCHIG00000026127	SBNO2	90	65.186	ENSAMXG00000018868	sbno2a	98	69.369	Astyanax_mexicanus
ENSCHIG00000026127	SBNO2	100	98.693	ENSBTAG00000020780	SBNO2	100	98.693	Bos_taurus
ENSCHIG00000026127	SBNO2	100	89.260	ENSCAFG00000019543	SBNO2	100	89.187	Canis_familiaris
ENSCHIG00000026127	SBNO2	92	91.975	ENSCAFG00020017115	SBNO2	99	91.415	Canis_lupus_dingo
ENSCHIG00000026127	SBNO2	88	83.937	ENSCAPG00000005731	SBNO2	99	84.102	Cavia_aperea
ENSCHIG00000026127	SBNO2	99	80.543	ENSCPOG00000007477	SBNO2	99	80.484	Cavia_porcellus
ENSCHIG00000026127	SBNO2	100	83.225	ENSCCAG00000037518	SBNO2	97	85.737	Cebus_capucinus
ENSCHIG00000026127	SBNO2	100	85.260	ENSCATG00000037046	SBNO2	97	87.774	Cercocebus_atys
ENSCHIG00000026127	SBNO2	90	84.810	ENSCLAG00000010178	SBNO2	98	89.437	Chinchilla_lanigera
ENSCHIG00000026127	SBNO2	100	85.260	ENSCSAG00000012317	SBNO2	99	85.188	Chlorocebus_sabaeus
ENSCHIG00000026127	SBNO2	95	71.642	ENSCPBG00000008920	SBNO2	92	77.425	Chrysemys_picta_bellii
ENSCHIG00000026127	SBNO2	86	87.270	ENSCANG00000036745	SBNO2	98	87.124	Colobus_angolensis_palliatus
ENSCHIG00000026127	SBNO2	100	80.856	ENSCGRG00001023960	Sbno2	100	80.276	Cricetulus_griseus_chok1gshd
ENSCHIG00000026127	SBNO2	100	82.609	ENSCGRG00000011984	Sbno2	100	82.029	Cricetulus_griseus_crigri
ENSCHIG00000026127	SBNO2	85	66.929	ENSCSEG00000006856	si:ch73-63e15.2	96	67.391	Cynoglossus_semilaevis
ENSCHIG00000026127	SBNO2	90	65.794	ENSCVAG00000005663	si:ch73-63e15.2	76	69.291	Cyprinodon_variegatus
ENSCHIG00000026127	SBNO2	85	68.325	ENSDARG00000016188	SBNO2	81	68.265	Danio_rerio
ENSCHIG00000026127	SBNO2	86	63.511	ENSDARG00000098801	sbno2a	89	63.835	Danio_rerio
ENSCHIG00000026127	SBNO2	100	85.673	ENSDORG00000002916	Sbno2	100	85.094	Dipodomys_ordii
ENSCHIG00000026127	SBNO2	100	88.542	ENSEASG00005021621	SBNO2	100	88.913	Equus_asinus_asinus
ENSCHIG00000026127	SBNO2	100	88.542	ENSECAG00000011827	SBNO2	100	88.913	Equus_caballus
ENSCHIG00000026127	SBNO2	90	65.842	ENSELUG00000020457	si:ch73-63e15.2	79	68.915	Esox_lucius
ENSCHIG00000026127	SBNO2	92	72.839	ENSFALG00000013988	SBNO2	95	72.839	Ficedula_albicollis
ENSCHIG00000026127	SBNO2	100	77.990	ENSFDAG00000015186	SBNO2	100	78.503	Fukomys_damarensis
ENSCHIG00000026127	SBNO2	90	65.287	ENSFHEG00000022262	si:ch73-63e15.2	75	68.604	Fundulus_heteroclitus
ENSCHIG00000026127	SBNO2	90	67.080	ENSGMOG00000007542	si:ch73-63e15.2	98	67.246	Gadus_morhua
ENSCHIG00000026127	SBNO2	99	67.958	ENSGALG00000037522	SBNO2	98	68.941	Gallus_gallus
ENSCHIG00000026127	SBNO2	90	66.292	ENSGAFG00000004860	si:ch73-63e15.2	90	69.464	Gambusia_affinis
ENSCHIG00000026127	SBNO2	85	69.774	ENSGACG00000013190	si:ch73-63e15.2	94	69.948	Gasterosteus_aculeatus
ENSCHIG00000026127	SBNO2	99	68.892	ENSGAGG00000008348	SBNO2	99	71.004	Gopherus_agassizii
ENSCHIG00000026127	SBNO2	86	69.297	ENSHBUG00000010742	si:ch73-63e15.2	77	68.777	Haplochromis_burtoni
ENSCHIG00000026127	SBNO2	100	83.948	ENSHGLG00000008739	SBNO2	100	84.176	Heterocephalus_glaber_female
ENSCHIG00000026127	SBNO2	93	83.580	ENSHGLG00100005269	SBNO2	98	89.965	Heterocephalus_glaber_male
ENSCHIG00000026127	SBNO2	87	67.436	ENSHCOG00000000884	si:ch73-63e15.2	86	68.318	Hippocampus_comes
ENSCHIG00000026127	SBNO2	90	65.998	ENSIPUG00000000537	si:ch73-63e15.2	83	69.660	Ictalurus_punctatus
ENSCHIG00000026127	SBNO2	85	68.278	ENSIPUG00000019672	sbno2	93	70.509	Ictalurus_punctatus
ENSCHIG00000026127	SBNO2	100	85.673	ENSSTOG00000025832	SBNO2	100	85.239	Ictidomys_tridecemlineatus
ENSCHIG00000026127	SBNO2	99	80.901	ENSJJAG00000017397	Sbno2	99	80.870	Jaculus_jaculus
ENSCHIG00000026127	SBNO2	86	69.324	ENSKMAG00000005541	si:ch73-63e15.2	77	69.211	Kryptolebias_marmoratus
ENSCHIG00000026127	SBNO2	86	68.589	ENSLBEG00000025016	si:ch73-63e15.2	95	69.979	Labrus_bergylta
ENSCHIG00000026127	SBNO2	50	70.760	ENSLACG00000012598	SBNO2	99	74.088	Latimeria_chalumnae
ENSCHIG00000026127	SBNO2	99	62.145	ENSLOCG00000004643	si:ch73-63e15.2	83	70.706	Lepisosteus_oculatus
ENSCHIG00000026127	SBNO2	94	82.873	ENSLAFG00000008824	SBNO2	100	82.441	Loxodonta_africana
ENSCHIG00000026127	SBNO2	100	82.502	ENSMFAG00000040030	SBNO2	97	85.063	Macaca_fascicularis
ENSCHIG00000026127	SBNO2	100	85.332	ENSMMUG00000010886	SBNO2	99	85.260	Macaca_mulatta
ENSCHIG00000026127	SBNO2	100	85.260	ENSMNEG00000039927	SBNO2	97	87.774	Macaca_nemestrina
ENSCHIG00000026127	SBNO2	83	87.771	ENSMLEG00000038556	SBNO2	98	87.771	Mandrillus_leucophaeus
ENSCHIG00000026127	SBNO2	86	69.558	ENSMAMG00000018758	si:ch73-63e15.2	74	69.792	Mastacembelus_armatus
ENSCHIG00000026127	SBNO2	86	69.211	ENSMZEG00005010682	si:ch73-63e15.2	78	65.324	Maylandia_zebra
ENSCHIG00000026127	SBNO2	95	73.095	ENSMGAG00000003801	SBNO2	97	72.904	Meleagris_gallopavo
ENSCHIG00000026127	SBNO2	100	82.088	ENSMAUG00000008034	Sbno2	100	81.798	Mesocricetus_auratus
ENSCHIG00000026127	SBNO2	100	86.604	ENSMICG00000013071	SBNO2	98	88.185	Microcebus_murinus
ENSCHIG00000026127	SBNO2	100	81.667	ENSMOCG00000010504	Sbno2	100	82.246	Microtus_ochrogaster
ENSCHIG00000026127	SBNO2	100	72.708	ENSMODG00000005382	SBNO2	100	72.607	Monodelphis_domestica
ENSCHIG00000026127	SBNO2	71	65.167	ENSMALG00000021831	si:ch73-63e15.2	98	64.609	Monopterus_albus
ENSCHIG00000026127	SBNO2	100	82.391	ENSMUSG00000035673	Sbno2	100	84.510	Mus_musculus
ENSCHIG00000026127	SBNO2	100	82.524	MGP_PahariEiJ_G0030976	Sbno2	100	81.798	Mus_pahari
ENSCHIG00000026127	SBNO2	100	82.524	MGP_SPRETEiJ_G0016381	Sbno2	99	84.311	Mus_spretus
ENSCHIG00000026127	SBNO2	79	91.220	ENSMPUG00000008747	SBNO2	100	91.220	Mustela_putorius_furo
ENSCHIG00000026127	SBNO2	100	80.044	ENSNGAG00000004308	Sbno2	100	80.479	Nannospalax_galili
ENSCHIG00000026127	SBNO2	82	68.468	ENSNBRG00000022968	si:ch73-63e15.2	93	72.919	Neolamprologus_brichardi
ENSCHIG00000026127	SBNO2	94	84.043	ENSNLEG00000001305	SBNO2	99	83.688	Nomascus_leucogenys
ENSCHIG00000026127	SBNO2	69	84.948	ENSMEUG00000013511	-	76	84.256	Notamacropus_eugenii
ENSCHIG00000026127	SBNO2	92	85.273	ENSOPRG00000017238	SBNO2	100	85.273	Ochotona_princeps
ENSCHIG00000026127	SBNO2	97	82.664	ENSODEG00000011822	SBNO2	99	82.800	Octodon_degus
ENSCHIG00000026127	SBNO2	86	69.471	ENSONIG00000002490	si:ch73-63e15.2	96	66.612	Oreochromis_niloticus
ENSCHIG00000026127	SBNO2	85	68.170	ENSORLG00000000913	si:ch73-63e15.2	77	67.698	Oryzias_latipes
ENSCHIG00000026127	SBNO2	85	68.170	ENSORLG00020010978	si:ch73-63e15.2	77	67.698	Oryzias_latipes_hni
ENSCHIG00000026127	SBNO2	85	68.257	ENSORLG00015000202	si:ch73-63e15.2	77	67.784	Oryzias_latipes_hsok
ENSCHIG00000026127	SBNO2	90	64.178	ENSOMEG00000000359	si:ch73-63e15.2	79	64.353	Oryzias_melastigma
ENSCHIG00000026127	SBNO2	100	90.123	ENSOARG00000011130	SBNO2	100	89.978	Ovis_aries
ENSCHIG00000026127	SBNO2	100	83.178	ENSPPAG00000032482	SBNO2	97	85.781	Pan_paniscus
ENSCHIG00000026127	SBNO2	97	86.605	ENSPTRG00000010185	SBNO2	99	86.419	Pan_troglodytes
ENSCHIG00000026127	SBNO2	100	82.153	ENSPANG00000009658	SBNO2	97	84.404	Papio_anubis
ENSCHIG00000026127	SBNO2	89	64.602	ENSPKIG00000024201	si:ch73-63e15.2	82	68.761	Paramormyrops_kingsleyae
ENSCHIG00000026127	SBNO2	79	69.231	ENSPKIG00000009707	-	85	70.509	Paramormyrops_kingsleyae
ENSCHIG00000026127	SBNO2	73	79.878	ENSPSIG00000002852	SBNO2	100	79.878	Pelodiscus_sinensis
ENSCHIG00000026127	SBNO2	85	67.982	ENSPMGG00000014375	si:ch73-63e15.2	87	68.070	Periophthalmus_magnuspinnatus
ENSCHIG00000026127	SBNO2	100	79.420	ENSPEMG00000024122	Sbno2	100	79.130	Peromyscus_maniculatus_bairdii
ENSCHIG00000026127	SBNO2	100	73.085	ENSPCIG00000011264	SBNO2	100	73.193	Phascolarctos_cinereus
ENSCHIG00000026127	SBNO2	90	66.269	ENSPFOG00000004096	si:ch73-63e15.2	99	69.124	Poecilia_formosa
ENSCHIG00000026127	SBNO2	86	69.689	ENSPLAG00000014653	si:ch73-63e15.2	76	69.637	Poecilia_latipinna
ENSCHIG00000026127	SBNO2	90	66.212	ENSPMEG00000002129	si:ch73-63e15.2	90	70.964	Poecilia_mexicana
ENSCHIG00000026127	SBNO2	90	66.481	ENSPREG00000006755	si:ch73-63e15.2	78	66.295	Poecilia_reticulata
ENSCHIG00000026127	SBNO2	97	78.338	ENSPCAG00000012256	SBNO2	99	77.967	Procavia_capensis
ENSCHIG00000026127	SBNO2	100	80.294	ENSPCOG00000015216	SBNO2	100	80.778	Propithecus_coquereli
ENSCHIG00000026127	SBNO2	86	69.211	ENSPNYG00000019926	si:ch73-63e15.2	77	68.691	Pundamilia_nyererei
ENSCHIG00000026127	SBNO2	90	66.133	ENSPNAG00000020260	si:ch73-63e15.2	82	69.531	Pygocentrus_nattereri
ENSCHIG00000026127	SBNO2	90	64.867	ENSPNAG00000026609	sbno2a	82	70.258	Pygocentrus_nattereri
ENSCHIG00000026127	SBNO2	100	82.451	ENSRNOG00000013987	Sbno2	98	85.185	Rattus_norvegicus
ENSCHIG00000026127	SBNO2	92	79.035	ENSRBIG00000009740	SBNO2	95	79.035	Rhinopithecus_bieti
ENSCHIG00000026127	SBNO2	90	87.486	ENSRROG00000044671	SBNO2	96	90.988	Rhinopithecus_roxellana
ENSCHIG00000026127	SBNO2	100	82.659	ENSSBOG00000023562	SBNO2	97	85.580	Saimiri_boliviensis_boliviensis
ENSCHIG00000026127	SBNO2	84	80.460	ENSSHAG00000010241	SBNO2	97	80.602	Sarcophilus_harrisii
ENSCHIG00000026127	SBNO2	86	66.753	ENSSFOG00015005861	si:ch73-63e15.2	92	67.446	Scleropages_formosus
ENSCHIG00000026127	SBNO2	86	69.037	ENSSMAG00000012489	si:ch73-63e15.2	73	69.271	Scophthalmus_maximus
ENSCHIG00000026127	SBNO2	86	69.792	ENSSDUG00000003527	si:ch73-63e15.2	73	70.026	Seriola_dumerili
ENSCHIG00000026127	SBNO2	86	69.878	ENSSLDG00000004623	si:ch73-63e15.2	73	70.113	Seriola_lalandi_dorsalis
ENSCHIG00000026127	SBNO2	86	70.512	ENSSPAG00000017717	si:ch73-63e15.2	75	70.573	Stegastes_partitus
ENSCHIG00000026127	SBNO2	98	93.010	ENSSSCG00000030042	SBNO2	97	94.074	Sus_scrofa
ENSCHIG00000026127	SBNO2	84	68.612	ENSTRUG00000018193	si:ch73-63e15.2	87	68.844	Takifugu_rubripes
ENSCHIG00000026127	SBNO2	88	92.476	ENSUAMG00000006568	SBNO2	100	91.003	Ursus_americanus
ENSCHIG00000026127	SBNO2	100	83.972	ENSVVUG00000022823	SBNO2	100	86.686	Vulpes_vulpes
ENSCHIG00000026127	SBNO2	77	78.812	ENSXETG00000021579	sbno2	91	77.426	Xenopus_tropicalis
ENSCHIG00000026127	SBNO2	71	70.681	ENSXCOG00000009209	si:ch73-63e15.2	91	70.308	Xiphophorus_couchianus
ENSCHIG00000026127	SBNO2	90	66.212	ENSXMAG00000012091	si:ch73-63e15.2	87	69.031	Xiphophorus_maculatus