EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000026207 (Gene tree)
Gene ID: 102176398
Gene Symbol: PYM1
Alias: PYM|WIBG
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 19978 bases
Position: chr5:56753468-56773445
Accession: 102176398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000032118	Mago-bind	PF09282.10	8.2e-14	1	1
ENSCHIP00000032110	Mago-bind	PF09282.10	8.9e-14	1	1
ENSCHIP00000032115	Mago-bind	PF09282.10	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039993	PYM1-203	585	-	ENSCHIP00000032118	194 (aa)	-	UPI000D19451C
ENSCHIT00000039990	PYM1-202	618	-	ENSCHIP00000032115	205 (aa)	-	UPI000D195129
ENSCHIT00000039985	PYM1-201	3912	XM_005680387	ENSCHIP00000032110	203 (aa)	XP_005680444	UPI0003AF4CB9

Gene Model

Click here to download ENSCHIG00000026207's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03013	RNA transport	KEGG
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026207	PYM1	94	93.194	ENSG00000170473	PYM1	94	93.194	Homo_sapiens
ENSCHIG00000026207	PYM1	99	57.944	ENSAPOG00000023045	pym1	94	58.049	Acanthochromis_polyacanthus
ENSCHIG00000026207	PYM1	92	91.061	ENSAMEG00000003091	PYM1	91	90.217	Ailuropoda_melanoleuca
ENSCHIG00000026207	PYM1	99	60.930	ENSACIG00000012769	pym1	94	59.903	Amphilophus_citrinellus
ENSCHIG00000026207	PYM1	99	58.294	ENSAOCG00000021358	pym1	94	58.333	Amphiprion_ocellaris
ENSCHIG00000026207	PYM1	99	58.294	ENSAPEG00000022679	pym1	94	58.333	Amphiprion_percula
ENSCHIG00000026207	PYM1	99	58.216	ENSATEG00000024022	pym1	94	60.784	Anabas_testudineus
ENSCHIG00000026207	PYM1	94	69.268	ENSACAG00000005714	PYM1	94	69.268	Anolis_carolinensis
ENSCHIG00000026207	PYM1	94	92.147	ENSANAG00000036967	PYM1	94	92.147	Aotus_nancymaae
ENSCHIG00000026207	PYM1	100	56.881	ENSAMXG00000007650	pym1	94	58.738	Astyanax_mexicanus
ENSCHIG00000026207	PYM1	100	97.537	ENSBTAG00000031146	PYM1	100	97.537	Bos_taurus
ENSCHIG00000026207	PYM1	94	92.147	ENSCJAG00000041077	PYM1	94	92.147	Callithrix_jacchus
ENSCHIG00000026207	PYM1	94	94.241	ENSCAFG00000000076	PYM1	94	94.241	Canis_familiaris
ENSCHIG00000026207	PYM1	94	94.241	ENSCAFG00020026099	PYM1	94	94.241	Canis_lupus_dingo
ENSCHIG00000026207	PYM1	94	90.052	ENSTSYG00000000787	PYM1	94	90.052	Carlito_syrichta
ENSCHIG00000026207	PYM1	92	87.151	ENSCAPG00000010374	PYM1	94	87.151	Cavia_aperea
ENSCHIG00000026207	PYM1	94	87.958	ENSCPOG00000031546	PYM1	94	87.958	Cavia_porcellus
ENSCHIG00000026207	PYM1	94	92.670	ENSCCAG00000026187	PYM1	94	92.670	Cebus_capucinus
ENSCHIG00000026207	PYM1	94	92.670	ENSCATG00000018801	PYM1	94	92.670	Cercocebus_atys
ENSCHIG00000026207	PYM1	94	85.864	ENSCLAG00000007964	PYM1	94	85.864	Chinchilla_lanigera
ENSCHIG00000026207	PYM1	93	92.222	ENSCSAG00000005291	PYM1	92	92.222	Chlorocebus_sabaeus
ENSCHIG00000026207	PYM1	98	41.148	ENSCING00000006448	-	93	41.414	Ciona_intestinalis
ENSCHIG00000026207	PYM1	98	38.667	ENSCSAVG00000009805	-	89	40.594	Ciona_savignyi
ENSCHIG00000026207	PYM1	98	84.343	ENSCANG00000019757	-	86	88.947	Colobus_angolensis_palliatus
ENSCHIG00000026207	PYM1	94	92.670	ENSCANG00000020338	-	94	92.670	Colobus_angolensis_palliatus
ENSCHIG00000026207	PYM1	94	86.911	ENSCGRG00001018051	-	94	86.911	Cricetulus_griseus_chok1gshd
ENSCHIG00000026207	PYM1	92	74.302	ENSCGRG00001004231	-	93	71.728	Cricetulus_griseus_chok1gshd
ENSCHIG00000026207	PYM1	92	74.302	ENSCGRG00000018933	-	93	71.728	Cricetulus_griseus_crigri
ENSCHIG00000026207	PYM1	94	86.911	ENSCGRG00000012495	-	94	86.911	Cricetulus_griseus_crigri
ENSCHIG00000026207	PYM1	94	55.882	ENSCSEG00000021531	pym1	94	58.824	Cynoglossus_semilaevis
ENSCHIG00000026207	PYM1	97	61.809	ENSCVAG00000017360	pym1	81	60.417	Cyprinodon_variegatus
ENSCHIG00000026207	PYM1	99	57.000	ENSDARG00000046024	pym1	94	54.106	Danio_rerio
ENSCHIG00000026207	PYM1	94	89.005	ENSDNOG00000048414	PYM1	86	89.005	Dasypus_novemcinctus
ENSCHIG00000026207	PYM1	94	90.576	ENSDORG00000029448	Pym1	94	90.576	Dipodomys_ordii
ENSCHIG00000026207	PYM1	97	35.149	FBgn0034918	Pym	88	35.602	Drosophila_melanogaster
ENSCHIG00000026207	PYM1	93	86.111	ENSETEG00000004461	-	94	86.111	Echinops_telfairi
ENSCHIG00000026207	PYM1	92	92.697	ENSEASG00005002271	PYM1	89	87.179	Equus_asinus_asinus
ENSCHIG00000026207	PYM1	94	93.194	ENSECAG00000011870	PYM1	94	93.194	Equus_caballus
ENSCHIG00000026207	PYM1	96	58.794	ENSELUG00000024250	pym1	94	59.694	Esox_lucius
ENSCHIG00000026207	PYM1	94	93.194	ENSFCAG00000013967	PYM1	94	93.194	Felis_catus
ENSCHIG00000026207	PYM1	94	89.005	ENSFDAG00000006314	PYM1	94	89.005	Fukomys_damarensis
ENSCHIG00000026207	PYM1	94	58.911	ENSFHEG00000005884	pym1	94	58.911	Fundulus_heteroclitus
ENSCHIG00000026207	PYM1	94	56.796	ENSGMOG00000007239	pym1	93	56.796	Gadus_morhua
ENSCHIG00000026207	PYM1	94	70.256	ENSGALG00000046169	PYM1	94	70.256	Gallus_gallus
ENSCHIG00000026207	PYM1	99	61.502	ENSGAFG00000003280	pym1	93	61.692	Gambusia_affinis
ENSCHIG00000026207	PYM1	100	55.340	ENSGACG00000010703	pym1	94	56.410	Gasterosteus_aculeatus
ENSCHIG00000026207	PYM1	93	66.146	ENSGAGG00000001973	PYM1	88	64.851	Gopherus_agassizii
ENSCHIG00000026207	PYM1	94	92.670	ENSGGOG00000043246	PYM1	94	92.670	Gorilla_gorilla
ENSCHIG00000026207	PYM1	94	60.099	ENSHBUG00000012719	pym1	94	61.576	Haplochromis_burtoni
ENSCHIG00000026207	PYM1	94	90.052	ENSHGLG00000017155	PYM1	94	90.052	Heterocephalus_glaber_female
ENSCHIG00000026207	PYM1	94	90.052	ENSHGLG00100015341	PYM1	94	90.052	Heterocephalus_glaber_male
ENSCHIG00000026207	PYM1	99	57.009	ENSHCOG00000007987	pym1	80	57.426	Hippocampus_comes
ENSCHIG00000026207	PYM1	100	58.525	ENSIPUG00000005975	wibga	94	58.738	Ictalurus_punctatus
ENSCHIG00000026207	PYM1	94	91.623	ENSSTOG00000014206	PYM1	94	91.623	Ictidomys_tridecemlineatus
ENSCHIG00000026207	PYM1	94	86.387	ENSJJAG00000013338	Pym1	94	86.387	Jaculus_jaculus
ENSCHIG00000026207	PYM1	99	57.207	ENSKMAG00000006351	pym1	95	56.338	Kryptolebias_marmoratus
ENSCHIG00000026207	PYM1	99	59.615	ENSLBEG00000015707	pym1	93	59.694	Labrus_bergylta
ENSCHIG00000026207	PYM1	93	62.304	ENSLACG00000014398	PYM1	90	61.735	Latimeria_chalumnae
ENSCHIG00000026207	PYM1	94	92.670	ENSLAFG00000002369	PYM1	94	92.670	Loxodonta_africana
ENSCHIG00000026207	PYM1	94	92.670	ENSMFAG00000003048	PYM1	94	92.670	Macaca_fascicularis
ENSCHIG00000026207	PYM1	94	92.670	ENSMMUG00000011002	PYM1	94	92.670	Macaca_mulatta
ENSCHIG00000026207	PYM1	94	92.670	ENSMNEG00000034677	PYM1	94	92.670	Macaca_nemestrina
ENSCHIG00000026207	PYM1	94	92.670	ENSMLEG00000007971	PYM1	94	92.670	Mandrillus_leucophaeus
ENSCHIG00000026207	PYM1	99	57.604	ENSMAMG00000001588	pym1	94	59.135	Mastacembelus_armatus
ENSCHIG00000026207	PYM1	94	59.606	ENSMZEG00005026458	pym1	94	61.084	Maylandia_zebra
ENSCHIG00000026207	PYM1	94	86.911	ENSMAUG00000007318	Pym1	94	86.911	Mesocricetus_auratus
ENSCHIG00000026207	PYM1	94	90.576	ENSMICG00000032962	PYM1	94	90.576	Microcebus_murinus
ENSCHIG00000026207	PYM1	94	85.864	ENSMOCG00000010208	Pym1	94	85.864	Microtus_ochrogaster
ENSCHIG00000026207	PYM1	99	59.709	ENSMMOG00000009301	pym1	92	60.825	Mola_mola
ENSCHIG00000026207	PYM1	99	59.524	ENSMALG00000013496	pym1	94	59.701	Monopterus_albus
ENSCHIG00000026207	PYM1	94	86.911	MGP_CAROLIEiJ_G0015953	Pym1	94	86.911	Mus_caroli
ENSCHIG00000026207	PYM1	94	87.958	ENSMUSG00000064030	Pym1	94	87.958	Mus_musculus
ENSCHIG00000026207	PYM1	94	85.864	MGP_PahariEiJ_G0031131	Pym1	94	85.864	Mus_pahari
ENSCHIG00000026207	PYM1	94	87.958	MGP_SPRETEiJ_G0016778	Pym1	94	87.958	Mus_spretus
ENSCHIG00000026207	PYM1	94	94.241	ENSMPUG00000000931	PYM1	94	94.241	Mustela_putorius_furo
ENSCHIG00000026207	PYM1	93	90.000	ENSMLUG00000003586	PYM1	90	89.503	Myotis_lucifugus
ENSCHIG00000026207	PYM1	93	87.778	ENSNGAG00000019207	Pym1	93	84.375	Nannospalax_galili
ENSCHIG00000026207	PYM1	99	60.849	ENSNBRG00000006951	pym1	94	61.576	Neolamprologus_brichardi
ENSCHIG00000026207	PYM1	94	93.194	ENSNLEG00000017588	PYM1	94	93.194	Nomascus_leucogenys
ENSCHIG00000026207	PYM1	92	77.528	ENSMEUG00000001017	PYM1	93	77.401	Notamacropus_eugenii
ENSCHIG00000026207	PYM1	93	87.222	ENSOPRG00000007797	PYM1	88	87.222	Ochotona_princeps
ENSCHIG00000026207	PYM1	94	89.529	ENSODEG00000004289	PYM1	94	89.529	Octodon_degus
ENSCHIG00000026207	PYM1	94	59.223	ENSONIG00000016740	pym1	94	60.680	Oreochromis_niloticus
ENSCHIG00000026207	PYM1	93	89.444	ENSOCUG00000025969	PYM1	87	84.974	Oryctolagus_cuniculus
ENSCHIG00000026207	PYM1	99	62.264	ENSORLG00000030592	pym1	94	61.881	Oryzias_latipes
ENSCHIG00000026207	PYM1	99	61.682	ENSORLG00020011264	pym1	94	61.765	Oryzias_latipes_hni
ENSCHIG00000026207	PYM1	99	63.033	ENSORLG00015005287	pym1	94	62.687	Oryzias_latipes_hsok
ENSCHIG00000026207	PYM1	99	62.136	ENSOMEG00000022250	pym1	94	61.421	Oryzias_melastigma
ENSCHIG00000026207	PYM1	93	92.778	ENSOGAG00000007038	PYM1	88	92.778	Otolemur_garnettii
ENSCHIG00000026207	PYM1	100	99.507	ENSOARG00000010856	PYM1	100	99.507	Ovis_aries
ENSCHIG00000026207	PYM1	94	93.194	ENSPPAG00000043630	PYM1	94	93.194	Pan_paniscus
ENSCHIG00000026207	PYM1	94	91.623	ENSPPRG00000013243	PYM1	94	91.623	Panthera_pardus
ENSCHIG00000026207	PYM1	94	91.099	ENSPTIG00000017380	PYM1	94	91.099	Panthera_tigris_altaica
ENSCHIG00000026207	PYM1	94	93.194	ENSPTRG00000005067	PYM1	94	93.194	Pan_troglodytes
ENSCHIG00000026207	PYM1	94	92.147	ENSPANG00000009562	PYM1	94	92.147	Papio_anubis
ENSCHIG00000026207	PYM1	100	62.264	ENSPKIG00000006301	pym1	94	62.500	Paramormyrops_kingsleyae
ENSCHIG00000026207	PYM1	93	65.079	ENSPSIG00000003043	PYM1	91	64.103	Pelodiscus_sinensis
ENSCHIG00000026207	PYM1	100	60.287	ENSPMGG00000023161	pym1	94	60.406	Periophthalmus_magnuspinnatus
ENSCHIG00000026207	PYM1	94	84.817	ENSPEMG00000009372	Pym1	94	84.817	Peromyscus_maniculatus_bairdii
ENSCHIG00000026207	PYM1	92	78.652	ENSPCIG00000024658	PYM1	91	76.596	Phascolarctos_cinereus
ENSCHIG00000026207	PYM1	99	60.930	ENSPFOG00000008193	pym1	93	61.084	Poecilia_formosa
ENSCHIG00000026207	PYM1	99	60.465	ENSPLAG00000009228	pym1	93	60.591	Poecilia_latipinna
ENSCHIG00000026207	PYM1	99	60.465	ENSPMEG00000001505	pym1	93	60.591	Poecilia_mexicana
ENSCHIG00000026207	PYM1	93	91.667	ENSPPYG00000004635	PYM1	92	91.667	Pongo_abelii
ENSCHIG00000026207	PYM1	94	91.623	ENSPCOG00000019706	PYM1	94	91.623	Propithecus_coquereli
ENSCHIG00000026207	PYM1	93	93.333	ENSPVAG00000011437	PYM1	92	93.333	Pteropus_vampyrus
ENSCHIG00000026207	PYM1	94	60.396	ENSPNYG00000012871	pym1	94	60.396	Pundamilia_nyererei
ENSCHIG00000026207	PYM1	99	58.716	ENSPNAG00000018833	pym1	94	59.330	Pygocentrus_nattereri
ENSCHIG00000026207	PYM1	92	64.171	ENSRNOG00000049415	AABR07055413.1	91	59.043	Rattus_norvegicus
ENSCHIG00000026207	PYM1	93	83.889	ENSRNOG00000058130	Pym1	94	80.729	Rattus_norvegicus
ENSCHIG00000026207	PYM1	94	87.958	ENSRBIG00000033362	PYM1	94	87.958	Rhinopithecus_bieti
ENSCHIG00000026207	PYM1	94	92.670	ENSRROG00000043620	PYM1	94	92.670	Rhinopithecus_roxellana
ENSCHIG00000026207	PYM1	94	92.670	ENSSBOG00000029393	PYM1	94	92.670	Saimiri_boliviensis_boliviensis
ENSCHIG00000026207	PYM1	93	78.836	ENSSHAG00000008280	PYM1	93	78.836	Sarcophilus_harrisii
ENSCHIG00000026207	PYM1	93	64.433	ENSSFOG00015021475	pym1	94	59.391	Scleropages_formosus
ENSCHIG00000026207	PYM1	99	56.398	ENSSMAG00000020912	pym1	94	57.921	Scophthalmus_maximus
ENSCHIG00000026207	PYM1	99	56.682	ENSSDUG00000001807	pym1	94	59.716	Seriola_dumerili
ENSCHIG00000026207	PYM1	99	60.488	ENSSLDG00000013730	pym1	94	62.814	Seriola_lalandi_dorsalis
ENSCHIG00000026207	PYM1	93	88.333	ENSSARG00000009569	PYM1	94	88.333	Sorex_araneus
ENSCHIG00000026207	PYM1	93	64.516	ENSSPUG00000015059	PYM1	90	64.516	Sphenodon_punctatus
ENSCHIG00000026207	PYM1	99	57.944	ENSSPAG00000020100	pym1	94	58.654	Stegastes_partitus
ENSCHIG00000026207	PYM1	94	94.241	ENSSSCG00000040825	PYM1	94	94.241	Sus_scrofa
ENSCHIG00000026207	PYM1	99	60.577	ENSTRUG00000021367	pym1	93	62.245	Takifugu_rubripes
ENSCHIG00000026207	PYM1	99	56.039	ENSTNIG00000012534	pym1	92	56.995	Tetraodon_nigroviridis
ENSCHIG00000026207	PYM1	93	85.556	ENSTBEG00000004208	PYM1	94	85.556	Tupaia_belangeri
ENSCHIG00000026207	PYM1	93	94.444	ENSTTRG00000014971	PYM1	92	94.444	Tursiops_truncatus
ENSCHIG00000026207	PYM1	94	92.147	ENSUAMG00000014521	PYM1	94	92.147	Ursus_americanus
ENSCHIG00000026207	PYM1	92	91.620	ENSUMAG00000016241	PYM1	85	88.770	Ursus_maritimus
ENSCHIG00000026207	PYM1	94	94.764	ENSVVUG00000022749	PYM1	94	94.764	Vulpes_vulpes
ENSCHIG00000026207	PYM1	94	61.340	ENSXETG00000021850	pym1	94	62.245	Xenopus_tropicalis
ENSCHIG00000026207	PYM1	99	60.465	ENSXMAG00000011649	pym1	93	60.591	Xiphophorus_maculatus