EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000026214 (Gene tree)
Gene ID: 102175380
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 99627 bases
Position: chr6:59970876-60070502
Accession: 102175380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000032123	RRM_1	PF00076.22	7.2e-38	1	3
ENSCHIP00000032123	RRM_1	PF00076.22	7.2e-38	2	3
ENSCHIP00000032123	RRM_1	PF00076.22	7.2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039998	RBM47-201	2016	XM_005681536	ENSCHIP00000032123	591 (aa)	XP_005681593	UPI0003AF7C5C

Gene Model

Click here to download ENSCHIG00000026214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000026214	RBM47	52	56.129	ENSCHIG00000024030	HNRNPR	79	45.476
ENSCHIG00000026214	RBM47	52	54.516	ENSCHIG00000024654	SYNCRIP	79	46.067
ENSCHIG00000026214	RBM47	73	57.768	ENSCHIG00000020411	A1CF	75	57.768
ENSCHIG00000026214	RBM47	56	68.468	ENSCHIG00000000502	RBM46	65	71.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026214	RBM47	100	97.143	ENSG00000163694	RBM47	100	99.115	Homo_sapiens
ENSCHIG00000026214	RBM47	100	77.759	ENSAPOG00000011062	rbm47	100	79.847	Acanthochromis_polyacanthus
ENSCHIG00000026214	RBM47	100	96.817	ENSAMEG00000009672	RBM47	100	96.817	Ailuropoda_melanoleuca
ENSCHIG00000026214	RBM47	100	77.517	ENSACIG00000011531	rbm47	100	76.846	Amphilophus_citrinellus
ENSCHIG00000026214	RBM47	100	78.319	ENSAOCG00000022245	rbm47	100	79.847	Amphiprion_ocellaris
ENSCHIG00000026214	RBM47	100	78.319	ENSAPEG00000018304	rbm47	100	79.847	Amphiprion_percula
ENSCHIG00000026214	RBM47	100	77.705	ENSATEG00000018400	rbm47	100	75.777	Anabas_testudineus
ENSCHIG00000026214	RBM47	100	88.533	ENSAPLG00000013974	RBM47	100	88.364	Anas_platyrhynchos
ENSCHIG00000026214	RBM47	100	86.167	ENSACAG00000011833	RBM47	100	86.333	Anolis_carolinensis
ENSCHIG00000026214	RBM47	100	97.143	ENSANAG00000029440	RBM47	100	97.143	Aotus_nancymaae
ENSCHIG00000026214	RBM47	100	76.432	ENSACLG00000016902	rbm47	100	81.186	Astatotilapia_calliptera
ENSCHIG00000026214	RBM47	100	75.862	ENSAMXG00000021794	rbm47	100	75.534	Astyanax_mexicanus
ENSCHIG00000026214	RBM47	100	99.662	ENSBTAG00000002356	RBM47	100	99.662	Bos_taurus
ENSCHIG00000026214	RBM47	100	96.812	ENSCJAG00000019385	RBM47	100	96.812	Callithrix_jacchus
ENSCHIG00000026214	RBM47	96	95.263	ENSCAFG00000015898	RBM47	100	93.603	Canis_familiaris
ENSCHIG00000026214	RBM47	87	95.922	ENSCAFG00020010558	RBM47	94	95.588	Canis_lupus_dingo
ENSCHIG00000026214	RBM47	78	88.991	ENSTSYG00000033612	RBM47	92	89.823	Carlito_syrichta
ENSCHIG00000026214	RBM47	100	89.039	ENSCAPG00000008426	RBM47	100	88.364	Cavia_aperea
ENSCHIG00000026214	RBM47	100	96.965	ENSCPOG00000014100	RBM47	100	96.965	Cavia_porcellus
ENSCHIG00000026214	RBM47	100	96.812	ENSCCAG00000030129	-	100	96.812	Cebus_capucinus
ENSCHIG00000026214	RBM47	99	67.677	ENSCCAG00000024397	-	99	66.553	Cebus_capucinus
ENSCHIG00000026214	RBM47	100	97.462	ENSCATG00000042064	RBM47	100	97.462	Cercocebus_atys
ENSCHIG00000026214	RBM47	100	96.622	ENSCLAG00000001684	RBM47	100	96.622	Chinchilla_lanigera
ENSCHIG00000026214	RBM47	100	97.311	ENSCSAG00000017060	RBM47	100	97.311	Chlorocebus_sabaeus
ENSCHIG00000026214	RBM47	88	94.937	ENSCHOG00000011731	RBM47	88	94.937	Choloepus_hoffmanni
ENSCHIG00000026214	RBM47	100	91.443	ENSCPBG00000013831	RBM47	100	91.107	Chrysemys_picta_bellii
ENSCHIG00000026214	RBM47	100	97.293	ENSCANG00000019997	RBM47	100	97.293	Colobus_angolensis_palliatus
ENSCHIG00000026214	RBM47	100	92.953	ENSCGRG00001000623	-	100	93.121	Cricetulus_griseus_chok1gshd
ENSCHIG00000026214	RBM47	100	64.735	ENSCGRG00001020102	-	100	73.435	Cricetulus_griseus_chok1gshd
ENSCHIG00000026214	RBM47	100	92.114	ENSCGRG00000007762	-	100	94.304	Cricetulus_griseus_crigri
ENSCHIG00000026214	RBM47	100	64.404	ENSCGRG00000014760	-	100	73.096	Cricetulus_griseus_crigri
ENSCHIG00000026214	RBM47	100	75.585	ENSCSEG00000004545	rbm47	100	73.993	Cynoglossus_semilaevis
ENSCHIG00000026214	RBM47	100	76.303	ENSCVAG00000020144	rbm47	100	80.102	Cyprinodon_variegatus
ENSCHIG00000026214	RBM47	100	77.265	ENSDARG00000061985	rbm47	100	76.606	Danio_rerio
ENSCHIG00000026214	RBM47	100	96.447	ENSDNOG00000046854	RBM47	100	96.447	Dasypus_novemcinctus
ENSCHIG00000026214	RBM47	100	95.477	ENSDORG00000010144	Rbm47	100	95.477	Dipodomys_ordii
ENSCHIG00000026214	RBM47	100	95.310	ENSETEG00000009194	RBM47	100	95.310	Echinops_telfairi
ENSCHIG00000026214	RBM47	99	57.661	ENSEBUG00000011912	rbm47	99	58.320	Eptatretus_burgeri
ENSCHIG00000026214	RBM47	100	98.985	ENSEASG00005008443	RBM47	100	98.985	Equus_asinus_asinus
ENSCHIG00000026214	RBM47	100	98.985	ENSECAG00000004400	RBM47	100	98.985	Equus_caballus
ENSCHIG00000026214	RBM47	75	96.104	ENSEEUG00000001194	RBM47	75	96.104	Erinaceus_europaeus
ENSCHIG00000026214	RBM47	99	75.879	ENSELUG00000006148	rbm47	97	81.794	Esox_lucius
ENSCHIG00000026214	RBM47	100	98.646	ENSFCAG00000012399	RBM47	100	98.646	Felis_catus
ENSCHIG00000026214	RBM47	100	91.261	ENSFALG00000002861	RBM47	100	91.597	Ficedula_albicollis
ENSCHIG00000026214	RBM47	100	94.932	ENSFDAG00000016326	RBM47	100	94.932	Fukomys_damarensis
ENSCHIG00000026214	RBM47	100	77.349	ENSFHEG00000007938	rbm47	100	75.336	Fundulus_heteroclitus
ENSCHIG00000026214	RBM47	100	74.634	ENSGMOG00000014802	rbm47	100	74.146	Gadus_morhua
ENSCHIG00000026214	RBM47	64	92.287	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSCHIG00000026214	RBM47	64	83.245	ENSGAFG00000020571	rbm47	98	81.698	Gambusia_affinis
ENSCHIG00000026214	RBM47	100	74.183	ENSGACG00000016223	rbm47	100	78.571	Gasterosteus_aculeatus
ENSCHIG00000026214	RBM47	100	91.611	ENSGAGG00000020051	RBM47	100	91.275	Gopherus_agassizii
ENSCHIG00000026214	RBM47	100	97.462	ENSGGOG00000001367	RBM47	100	97.462	Gorilla_gorilla
ENSCHIG00000026214	RBM47	100	76.183	ENSHBUG00000003520	rbm47	100	81.186	Haplochromis_burtoni
ENSCHIG00000026214	RBM47	84	91.870	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSCHIG00000026214	RBM47	100	95.608	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSCHIG00000026214	RBM47	100	85.618	ENSHGLG00100003071	-	100	84.433	Heterocephalus_glaber_male
ENSCHIG00000026214	RBM47	99	76.884	ENSHCOG00000002074	rbm47	99	78.316	Hippocampus_comes
ENSCHIG00000026214	RBM47	100	77.983	ENSIPUG00000004743	rbm47	100	76.975	Ictalurus_punctatus
ENSCHIG00000026214	RBM47	100	96.644	ENSSTOG00000004727	RBM47	100	96.644	Ictidomys_tridecemlineatus
ENSCHIG00000026214	RBM47	100	93.970	ENSJJAG00000013823	Rbm47	100	95.310	Jaculus_jaculus
ENSCHIG00000026214	RBM47	100	78.392	ENSKMAG00000000084	rbm47	100	78.827	Kryptolebias_marmoratus
ENSCHIG00000026214	RBM47	100	77.090	ENSLBEG00000008436	rbm47	100	77.041	Labrus_bergylta
ENSCHIG00000026214	RBM47	100	85.882	ENSLACG00000007196	RBM47	100	85.210	Latimeria_chalumnae
ENSCHIG00000026214	RBM47	100	82.521	ENSLOCG00000012966	rbm47	95	81.345	Lepisosteus_oculatus
ENSCHIG00000026214	RBM47	100	96.134	ENSLAFG00000011998	RBM47	100	96.134	Loxodonta_africana
ENSCHIG00000026214	RBM47	100	97.462	ENSMFAG00000037967	RBM47	100	97.462	Macaca_fascicularis
ENSCHIG00000026214	RBM47	100	97.311	ENSMMUG00000012036	RBM47	100	98.964	Macaca_mulatta
ENSCHIG00000026214	RBM47	100	97.462	ENSMNEG00000040774	RBM47	100	97.462	Macaca_nemestrina
ENSCHIG00000026214	RBM47	100	99.048	ENSMLEG00000041432	RBM47	100	99.048	Mandrillus_leucophaeus
ENSCHIG00000026214	RBM47	100	77.011	ENSMAMG00000019143	rbm47	100	77.995	Mastacembelus_armatus
ENSCHIG00000026214	RBM47	100	76.432	ENSMZEG00005023659	rbm47	100	75.777	Maylandia_zebra
ENSCHIG00000026214	RBM47	100	90.635	ENSMGAG00000012226	RBM47	100	90.468	Meleagris_gallopavo
ENSCHIG00000026214	RBM47	100	93.613	ENSMAUG00000006493	Rbm47	100	94.304	Mesocricetus_auratus
ENSCHIG00000026214	RBM47	100	89.848	ENSMICG00000026417	RBM47	100	91.781	Microcebus_murinus
ENSCHIG00000026214	RBM47	100	94.276	ENSMOCG00000021170	Rbm47	100	96.203	Microtus_ochrogaster
ENSCHIG00000026214	RBM47	100	77.213	ENSMMOG00000007260	rbm47	100	74.918	Mola_mola
ENSCHIG00000026214	RBM47	52	82.315	ENSMODG00000015426	-	97	79.487	Monodelphis_domestica
ENSCHIG00000026214	RBM47	100	91.906	ENSMODG00000007003	RBM47	100	91.400	Monodelphis_domestica
ENSCHIG00000026214	RBM47	100	82.064	ENSMODG00000020561	-	100	82.403	Monodelphis_domestica
ENSCHIG00000026214	RBM47	100	77.349	ENSMALG00000005167	rbm47	100	79.744	Monopterus_albus
ENSCHIG00000026214	RBM47	100	93.761	MGP_CAROLIEiJ_G0027258	Rbm47	100	94.266	Mus_caroli
ENSCHIG00000026214	RBM47	100	94.098	ENSMUSG00000070780	Rbm47	100	94.604	Mus_musculus
ENSCHIG00000026214	RBM47	100	94.098	MGP_PahariEiJ_G0017040	Rbm47	100	94.604	Mus_pahari
ENSCHIG00000026214	RBM47	100	94.755	MGP_SPRETEiJ_G0028253	Rbm47	100	94.755	Mus_spretus
ENSCHIG00000026214	RBM47	100	97.811	ENSMPUG00000006177	RBM47	94	97.811	Mustela_putorius_furo
ENSCHIG00000026214	RBM47	100	94.257	ENSMLUG00000000889	RBM47	100	94.595	Myotis_lucifugus
ENSCHIG00000026214	RBM47	100	94.454	ENSNGAG00000003325	Rbm47	100	95.126	Nannospalax_galili
ENSCHIG00000026214	RBM47	100	76.307	ENSNBRG00000015092	rbm47	100	75.817	Neolamprologus_brichardi
ENSCHIG00000026214	RBM47	100	97.124	ENSNLEG00000017151	RBM47	100	97.124	Nomascus_leucogenys
ENSCHIG00000026214	RBM47	72	87.150	ENSMEUG00000009516	-	99	86.215	Notamacropus_eugenii
ENSCHIG00000026214	RBM47	75	96.281	ENSOPRG00000016507	-	75	96.281	Ochotona_princeps
ENSCHIG00000026214	RBM47	100	97.128	ENSODEG00000004873	RBM47	100	97.128	Octodon_degus
ENSCHIG00000026214	RBM47	100	76.596	ENSONIG00000009061	rbm47	100	75.286	Oreochromis_niloticus
ENSCHIG00000026214	RBM47	100	87.458	ENSOANG00000008978	RBM47	100	88.127	Ornithorhynchus_anatinus
ENSCHIG00000026214	RBM47	100	96.791	ENSOCUG00000012034	RBM47	100	96.791	Oryctolagus_cuniculus
ENSCHIG00000026214	RBM47	100	77.517	ENSORLG00000005847	rbm47	100	79.434	Oryzias_latipes
ENSCHIG00000026214	RBM47	100	77.685	ENSORLG00020005154	rbm47	100	79.434	Oryzias_latipes_hni
ENSCHIG00000026214	RBM47	100	78.020	ENSORLG00015000066	rbm47	100	79.692	Oryzias_latipes_hsok
ENSCHIG00000026214	RBM47	100	79.027	ENSOMEG00000010730	rbm47	100	77.349	Oryzias_melastigma
ENSCHIG00000026214	RBM47	100	87.986	ENSOGAG00000025193	-	100	87.479	Otolemur_garnettii
ENSCHIG00000026214	RBM47	100	97.306	ENSOGAG00000029367	-	100	97.306	Otolemur_garnettii
ENSCHIG00000026214	RBM47	100	91.032	ENSOARG00000012711	RBM47	100	91.032	Ovis_aries
ENSCHIG00000026214	RBM47	100	97.293	ENSPPAG00000029763	RBM47	100	97.293	Pan_paniscus
ENSCHIG00000026214	RBM47	100	95.262	ENSPPRG00000012873	RBM47	100	95.262	Panthera_pardus
ENSCHIG00000026214	RBM47	85	94.622	ENSPTIG00000017046	RBM47	100	94.622	Panthera_tigris_altaica
ENSCHIG00000026214	RBM47	100	97.462	ENSPTRG00000016006	RBM47	100	97.462	Pan_troglodytes
ENSCHIG00000026214	RBM47	100	97.462	ENSPANG00000005980	RBM47	100	97.462	Papio_anubis
ENSCHIG00000026214	RBM47	96	78.185	ENSPKIG00000005037	rbm47	100	75.622	Paramormyrops_kingsleyae
ENSCHIG00000026214	RBM47	96	76.215	ENSPKIG00000013431	RBM47	98	80.620	Paramormyrops_kingsleyae
ENSCHIG00000026214	RBM47	89	91.856	ENSPSIG00000017516	RBM47	97	91.856	Pelodiscus_sinensis
ENSCHIG00000026214	RBM47	100	75.839	ENSPMGG00000018540	rbm47	100	75.336	Periophthalmus_magnuspinnatus
ENSCHIG00000026214	RBM47	100	94.454	ENSPEMG00000011088	Rbm47	100	95.126	Peromyscus_maniculatus_bairdii
ENSCHIG00000026214	RBM47	96	79.931	ENSPFOG00000007997	rbm47	100	75.285	Poecilia_formosa
ENSCHIG00000026214	RBM47	96	79.723	ENSPLAG00000002072	rbm47	100	81.915	Poecilia_latipinna
ENSCHIG00000026214	RBM47	100	78.631	ENSPMEG00000017492	rbm47	100	79.847	Poecilia_mexicana
ENSCHIG00000026214	RBM47	96	80.069	ENSPREG00000008456	rbm47	100	82.181	Poecilia_reticulata
ENSCHIG00000026214	RBM47	98	82.264	ENSPPYG00000014688	RBM47	100	82.095	Pongo_abelii
ENSCHIG00000026214	RBM47	81	97.257	ENSPCAG00000011879	RBM47	81	97.257	Procavia_capensis
ENSCHIG00000026214	RBM47	100	92.386	ENSPCOG00000023451	RBM47	100	92.555	Propithecus_coquereli
ENSCHIG00000026214	RBM47	100	96.801	ENSPVAG00000003812	RBM47	100	96.801	Pteropus_vampyrus
ENSCHIG00000026214	RBM47	100	75.896	ENSPNYG00000022868	rbm47	100	75.407	Pundamilia_nyererei
ENSCHIG00000026214	RBM47	100	76.519	ENSPNAG00000007940	rbm47	100	75.862	Pygocentrus_nattereri
ENSCHIG00000026214	RBM47	100	94.266	ENSRNOG00000002408	Rbm47	100	94.772	Rattus_norvegicus
ENSCHIG00000026214	RBM47	100	97.293	ENSRBIG00000039601	RBM47	100	97.293	Rhinopithecus_bieti
ENSCHIG00000026214	RBM47	100	97.293	ENSRROG00000044696	RBM47	100	97.293	Rhinopithecus_roxellana
ENSCHIG00000026214	RBM47	100	93.401	ENSSBOG00000028475	RBM47	100	97.320	Saimiri_boliviensis_boliviensis
ENSCHIG00000026214	RBM47	100	93.063	ENSSHAG00000017576	RBM47	100	92.217	Sarcophilus_harrisii
ENSCHIG00000026214	RBM47	100	74.007	ENSSFOG00015012445	rbm47	100	72.637	Scleropages_formosus
ENSCHIG00000026214	RBM47	100	75.377	ENSSFOG00015024101	RBM47	100	74.874	Scleropages_formosus
ENSCHIG00000026214	RBM47	100	75.738	ENSSMAG00000009744	rbm47	100	78.974	Scophthalmus_maximus
ENSCHIG00000026214	RBM47	100	78.859	ENSSDUG00000022684	rbm47	100	77.219	Seriola_dumerili
ENSCHIG00000026214	RBM47	100	79.195	ENSSLDG00000003109	rbm47	100	78.788	Seriola_lalandi_dorsalis
ENSCHIG00000026214	RBM47	85	96.429	ENSSARG00000001735	RBM47	75	96.429	Sorex_araneus
ENSCHIG00000026214	RBM47	100	88.403	ENSSPUG00000007515	RBM47	100	89.096	Sphenodon_punctatus
ENSCHIG00000026214	RBM47	100	79.195	ENSSPAG00000001257	rbm47	100	80.612	Stegastes_partitus
ENSCHIG00000026214	RBM47	100	99.154	ENSSSCG00000008796	RBM47	100	99.154	Sus_scrofa
ENSCHIG00000026214	RBM47	100	90.741	ENSTGUG00000008705	RBM47	100	90.909	Taeniopygia_guttata
ENSCHIG00000026214	RBM47	98	77.172	ENSTRUG00000014050	rbm47	100	74.787	Takifugu_rubripes
ENSCHIG00000026214	RBM47	100	76.393	ENSTNIG00000006127	rbm47	100	74.384	Tetraodon_nigroviridis
ENSCHIG00000026214	RBM47	77	92.405	ENSTBEG00000001607	RBM47	76	92.405	Tupaia_belangeri
ENSCHIG00000026214	RBM47	100	98.139	ENSTTRG00000002839	RBM47	100	98.139	Tursiops_truncatus
ENSCHIG00000026214	RBM47	100	97.643	ENSUAMG00000021346	RBM47	100	97.643	Ursus_americanus
ENSCHIG00000026214	RBM47	57	98.630	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSCHIG00000026214	RBM47	100	95.616	ENSVVUG00000014774	RBM47	100	95.616	Vulpes_vulpes
ENSCHIG00000026214	RBM47	100	86.341	ENSXETG00000012802	rbm47	100	86.341	Xenopus_tropicalis
ENSCHIG00000026214	RBM47	88	82.979	ENSXCOG00000000780	rbm47	100	81.649	Xiphophorus_couchianus
ENSCHIG00000026214	RBM47	100	77.517	ENSXMAG00000009874	rbm47	100	79.337	Xiphophorus_maculatus