EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000026270 (Gene tree)
Gene ID: 102175419
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 18028 bases
Position: chr13:79083051-79101078
Accession: 102175419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000032217	zf-C2H2	PF00096.26	1.2e-26	1	6
ENSCHIP00000032217	zf-C2H2	PF00096.26	1.2e-26	2	6
ENSCHIP00000032217	zf-C2H2	PF00096.26	1.2e-26	3	6
ENSCHIP00000032217	zf-C2H2	PF00096.26	1.2e-26	4	6
ENSCHIP00000032217	zf-C2H2	PF00096.26	1.2e-26	5	6
ENSCHIP00000032217	zf-C2H2	PF00096.26	1.2e-26	6	6
ENSCHIP00000032217	zf-met	PF12874.7	5.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000040092	SALL4-201	6030	XM_018058044	ENSCHIP00000032217	1063 (aa)	XP_017913533	UPI00084752B7

Gene Model

Click here to download ENSCHIG00000026270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000026270	SALL4	100	59.615	ENSCHIG00000026074	SALL1	100	65.385
ENSCHIG00000026270	SALL4	54	31.132	ENSCHIG00000022360	ZNF770	71	37.143
ENSCHIG00000026270	SALL4	64	59.615	ENSCHIG00000000145	SALL3	96	65.385
ENSCHIG00000026270	SALL4	66	51.111	ENSCHIG00000000391	ZNF236	68	51.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026270	SALL4	100	78.518	ENSG00000101115	SALL4	100	96.000	Homo_sapiens
ENSCHIG00000026270	SALL4	100	42.944	ENSAPOG00000002465	sall4	100	42.670	Acanthochromis_polyacanthus
ENSCHIG00000026270	SALL4	100	81.818	ENSAMEG00000013250	-	100	81.631	Ailuropoda_melanoleuca
ENSCHIG00000026270	SALL4	100	42.105	ENSACIG00000017298	sall4	100	41.524	Amphilophus_citrinellus
ENSCHIG00000026270	SALL4	100	43.516	ENSAOCG00000023678	sall4	100	43.118	Amphiprion_ocellaris
ENSCHIG00000026270	SALL4	100	43.630	ENSAPEG00000000751	sall4	100	43.031	Amphiprion_percula
ENSCHIG00000026270	SALL4	100	42.660	ENSATEG00000024480	sall4	100	42.301	Anabas_testudineus
ENSCHIG00000026270	SALL4	100	53.287	ENSAPLG00000006498	SALL4	100	52.926	Anas_platyrhynchos
ENSCHIG00000026270	SALL4	100	52.302	ENSACAG00000012748	SALL4	100	52.125	Anolis_carolinensis
ENSCHIG00000026270	SALL4	100	79.081	ENSANAG00000023352	SALL4	100	96.000	Aotus_nancymaae
ENSCHIG00000026270	SALL4	100	42.660	ENSACLG00000017851	sall4	100	42.169	Astatotilapia_calliptera
ENSCHIG00000026270	SALL4	99	44.041	ENSAMXG00000001254	sall4	99	45.126	Astyanax_mexicanus
ENSCHIG00000026270	SALL4	100	96.147	ENSBTAG00000003101	SALL4	100	96.147	Bos_taurus
ENSCHIG00000026270	SALL4	80	80.353	ENSCJAG00000000591	SALL4	99	80.353	Callithrix_jacchus
ENSCHIG00000026270	SALL4	100	81.127	ENSCAFG00000011738	-	100	80.939	Canis_familiaris
ENSCHIG00000026270	SALL4	100	81.127	ENSCAFG00020021870	SALL4	100	80.939	Canis_lupus_dingo
ENSCHIG00000026270	SALL4	100	77.528	ENSTSYG00000007359	SALL4	100	95.833	Carlito_syrichta
ENSCHIG00000026270	SALL4	96	74.294	ENSCAPG00000012135	SALL4	96	75.000	Cavia_aperea
ENSCHIG00000026270	SALL4	50	84.549	ENSCPOG00000036300	-	100	84.549	Cavia_porcellus
ENSCHIG00000026270	SALL4	100	73.709	ENSCCAG00000029512	-	100	79.365	Cebus_capucinus
ENSCHIG00000026270	SALL4	100	78.592	ENSCATG00000030757	SALL4	100	96.000	Cercocebus_atys
ENSCHIG00000026270	SALL4	100	76.239	ENSCLAG00000010479	SALL4	93	92.000	Chinchilla_lanigera
ENSCHIG00000026270	SALL4	100	78.612	ENSCSAG00000015269	SALL4	100	78.612	Chlorocebus_sabaeus
ENSCHIG00000026270	SALL4	100	53.362	ENSCPBG00000014995	SALL4	99	54.596	Chrysemys_picta_bellii
ENSCHIG00000026270	SALL4	100	78.612	ENSCANG00000036463	SALL4	100	78.612	Colobus_angolensis_palliatus
ENSCHIG00000026270	SALL4	100	68.500	ENSCGRG00001019569	Sall4	100	70.385	Cricetulus_griseus_chok1gshd
ENSCHIG00000026270	SALL4	100	68.220	ENSCGRG00000000462	Sall4	99	77.778	Cricetulus_griseus_crigri
ENSCHIG00000026270	SALL4	100	42.535	ENSCSEG00000014604	sall4	100	42.159	Cynoglossus_semilaevis
ENSCHIG00000026270	SALL4	100	42.957	ENSCVAG00000010815	sall4	100	42.807	Cyprinodon_variegatus
ENSCHIG00000026270	SALL4	99	43.585	ENSDARG00000044485	sall4	99	43.076	Danio_rerio
ENSCHIG00000026270	SALL4	100	76.945	ENSDNOG00000040633	SALL4	100	76.757	Dasypus_novemcinctus
ENSCHIG00000026270	SALL4	100	67.290	ENSDORG00000012841	Sall4	100	85.714	Dipodomys_ordii
ENSCHIG00000026270	SALL4	66	74.000	ENSETEG00000012475	-	64	74.000	Echinops_telfairi
ENSCHIG00000026270	SALL4	100	81.596	ENSECAG00000018533	SALL4	100	81.408	Equus_caballus
ENSCHIG00000026270	SALL4	100	74.460	ENSEEUG00000003649	SALL4	99	74.554	Erinaceus_europaeus
ENSCHIG00000026270	SALL4	100	42.159	ENSELUG00000005696	sall4	93	67.308	Esox_lucius
ENSCHIG00000026270	SALL4	100	79.756	ENSFCAG00000002822	SALL4	93	92.704	Felis_catus
ENSCHIG00000026270	SALL4	100	51.431	ENSFALG00000013149	SALL4	100	52.463	Ficedula_albicollis
ENSCHIG00000026270	SALL4	100	75.775	ENSFDAG00000017812	SALL4	93	92.000	Fukomys_damarensis
ENSCHIG00000026270	SALL4	100	44.416	ENSFHEG00000014187	sall4	100	43.810	Fundulus_heteroclitus
ENSCHIG00000026270	SALL4	100	41.161	ENSGMOG00000003822	sall4	100	41.688	Gadus_morhua
ENSCHIG00000026270	SALL4	100	52.773	ENSGALG00000041365	SALL4	99	53.994	Gallus_gallus
ENSCHIG00000026270	SALL4	100	42.967	ENSGAFG00000019925	sall4	100	43.103	Gambusia_affinis
ENSCHIG00000026270	SALL4	100	38.745	ENSGACG00000011124	sall4	100	39.629	Gasterosteus_aculeatus
ENSCHIG00000026270	SALL4	100	53.624	ENSGAGG00000002297	SALL4	100	53.438	Gopherus_agassizii
ENSCHIG00000026270	SALL4	100	78.799	ENSGGOG00000001832	SALL4	100	96.000	Gorilla_gorilla
ENSCHIG00000026270	SALL4	100	42.511	ENSHBUG00000007327	sall4	100	42.019	Haplochromis_burtoni
ENSCHIG00000026270	SALL4	96	77.006	ENSHGLG00000009043	SALL4	96	77.656	Heterocephalus_glaber_female
ENSCHIG00000026270	SALL4	96	77.104	ENSHGLG00100002722	SALL4	96	77.756	Heterocephalus_glaber_male
ENSCHIG00000026270	SALL4	100	42.023	ENSHCOG00000008519	sall4	100	41.848	Hippocampus_comes
ENSCHIG00000026270	SALL4	99	43.519	ENSIPUG00000019170	sall4	99	42.918	Ictalurus_punctatus
ENSCHIG00000026270	SALL4	69	83.951	ENSSTOG00000025002	SALL4	100	90.141	Ictidomys_tridecemlineatus
ENSCHIG00000026270	SALL4	100	75.981	ENSJJAG00000020688	Sall4	100	88.732	Jaculus_jaculus
ENSCHIG00000026270	SALL4	100	42.380	ENSKMAG00000002501	sall4	100	42.466	Kryptolebias_marmoratus
ENSCHIG00000026270	SALL4	100	42.151	ENSLBEG00000019951	sall4	100	41.910	Labrus_bergylta
ENSCHIG00000026270	SALL4	93	45.000	ENSLACG00000013898	SALL4	100	57.778	Latimeria_chalumnae
ENSCHIG00000026270	SALL4	100	45.779	ENSLOCG00000002427	sall4	100	45.000	Lepisosteus_oculatus
ENSCHIG00000026270	SALL4	100	76.382	ENSLAFG00000004309	SALL4	100	75.914	Loxodonta_africana
ENSCHIG00000026270	SALL4	100	78.799	ENSMFAG00000027169	SALL4	100	78.799	Macaca_fascicularis
ENSCHIG00000026270	SALL4	90	78.914	ENSMMUG00000003870	SALL4	100	96.000	Macaca_mulatta
ENSCHIG00000026270	SALL4	90	79.019	ENSMNEG00000035995	SALL4	100	96.000	Macaca_nemestrina
ENSCHIG00000026270	SALL4	100	78.612	ENSMLEG00000030467	SALL4	100	78.612	Mandrillus_leucophaeus
ENSCHIG00000026270	SALL4	100	42.281	ENSMAMG00000005223	sall4	100	42.222	Mastacembelus_armatus
ENSCHIG00000026270	SALL4	100	42.660	ENSMZEG00005023418	sall4	100	42.169	Maylandia_zebra
ENSCHIG00000026270	SALL4	79	65.385	ENSMGAG00000009344	SALL4	99	65.385	Meleagris_gallopavo
ENSCHIG00000026270	SALL4	100	68.558	ENSMAUG00000015814	Sall4	99	86.111	Mesocricetus_auratus
ENSCHIG00000026270	SALL4	100	78.236	ENSMICG00000000027	SALL4	100	88.841	Microcebus_murinus
ENSCHIG00000026270	SALL4	100	70.872	ENSMOCG00000018245	Sall4	100	89.041	Microtus_ochrogaster
ENSCHIG00000026270	SALL4	100	42.770	ENSMMOG00000014929	sall4	100	42.509	Mola_mola
ENSCHIG00000026270	SALL4	100	57.028	ENSMODG00000016387	SALL4	97	56.938	Monodelphis_domestica
ENSCHIG00000026270	SALL4	100	42.255	ENSMALG00000018709	sall4	100	41.902	Monopterus_albus
ENSCHIG00000026270	SALL4	100	67.190	MGP_CAROLIEiJ_G0024723	Sall4	100	87.500	Mus_caroli
ENSCHIG00000026270	SALL4	100	67.098	ENSMUSG00000027547	Sall4	100	87.500	Mus_musculus
ENSCHIG00000026270	SALL4	100	67.093	MGP_PahariEiJ_G0026164	Sall4	100	87.500	Mus_pahari
ENSCHIG00000026270	SALL4	100	67.098	MGP_SPRETEiJ_G0025643	Sall4	100	87.500	Mus_spretus
ENSCHIG00000026270	SALL4	100	82.662	ENSMPUG00000017543	SALL4	96	82.474	Mustela_putorius_furo
ENSCHIG00000026270	SALL4	99	57.465	ENSMLUG00000028073	-	99	56.981	Myotis_lucifugus
ENSCHIG00000026270	SALL4	100	69.577	ENSMLUG00000008405	-	100	69.390	Myotis_lucifugus
ENSCHIG00000026270	SALL4	96	78.278	ENSMLUG00000007060	-	99	78.947	Myotis_lucifugus
ENSCHIG00000026270	SALL4	100	73.925	ENSNGAG00000017833	Sall4	99	85.043	Nannospalax_galili
ENSCHIG00000026270	SALL4	100	41.983	ENSNBRG00000001829	sall4	100	41.474	Neolamprologus_brichardi
ENSCHIG00000026270	SALL4	100	78.705	ENSNLEG00000007013	SALL4	100	78.705	Nomascus_leucogenys
ENSCHIG00000026270	SALL4	82	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSCHIG00000026270	SALL4	100	75.187	ENSOPRG00000011640	SALL4	100	75.000	Ochotona_princeps
ENSCHIG00000026270	SALL4	100	42.597	ENSONIG00000016557	sall4	100	42.192	Oreochromis_niloticus
ENSCHIG00000026270	SALL4	100	58.319	ENSOANG00000008667	SALL4	97	57.420	Ornithorhynchus_anatinus
ENSCHIG00000026270	SALL4	96	75.657	ENSOCUG00000011797	SALL4	99	76.186	Oryctolagus_cuniculus
ENSCHIG00000026270	SALL4	100	43.018	ENSORLG00000016130	sall4	100	43.007	Oryzias_latipes
ENSCHIG00000026270	SALL4	100	42.906	ENSORLG00020007339	sall4	100	43.154	Oryzias_latipes_hni
ENSCHIG00000026270	SALL4	100	43.029	ENSORLG00015002265	sall4	100	42.931	Oryzias_latipes_hsok
ENSCHIG00000026270	SALL4	100	43.663	ENSOMEG00000017344	sall4	100	43.105	Oryzias_melastigma
ENSCHIG00000026270	SALL4	94	77.104	ENSOGAG00000013799	SALL4	99	77.104	Otolemur_garnettii
ENSCHIG00000026270	SALL4	100	89.276	ENSOARG00000014570	SALL4	100	88.993	Ovis_aries
ENSCHIG00000026270	SALL4	100	78.705	ENSPPAG00000038064	SALL4	100	96.000	Pan_paniscus
ENSCHIG00000026270	SALL4	100	80.131	ENSPPRG00000008677	SALL4	93	92.275	Panthera_pardus
ENSCHIG00000026270	SALL4	100	78.799	ENSPTRG00000013631	SALL4	100	96.000	Pan_troglodytes
ENSCHIG00000026270	SALL4	90	79.019	ENSPANG00000021792	SALL4	100	96.000	Papio_anubis
ENSCHIG00000026270	SALL4	100	43.993	ENSPKIG00000007074	sall4	100	43.583	Paramormyrops_kingsleyae
ENSCHIG00000026270	SALL4	100	52.393	ENSPSIG00000009066	SALL4	100	52.212	Pelodiscus_sinensis
ENSCHIG00000026270	SALL4	100	42.349	ENSPMGG00000022551	sall4	100	42.063	Periophthalmus_magnuspinnatus
ENSCHIG00000026270	SALL4	100	70.698	ENSPEMG00000022706	Sall4	99	86.111	Peromyscus_maniculatus_bairdii
ENSCHIG00000026270	SALL4	100	55.187	ENSPCIG00000022838	SALL4	97	55.275	Phascolarctos_cinereus
ENSCHIG00000026270	SALL4	100	43.599	ENSPFOG00000001442	sall4	100	43.092	Poecilia_formosa
ENSCHIG00000026270	SALL4	100	43.512	ENSPLAG00000008760	sall4	100	43.005	Poecilia_latipinna
ENSCHIG00000026270	SALL4	100	43.599	ENSPMEG00000008497	sall4	100	43.092	Poecilia_mexicana
ENSCHIG00000026270	SALL4	100	43.669	ENSPREG00000021140	sall4	100	43.227	Poecilia_reticulata
ENSCHIG00000026270	SALL4	100	78.612	ENSPPYG00000011138	SALL4	100	78.612	Pongo_abelii
ENSCHIG00000026270	SALL4	100	72.326	ENSPCAG00000004726	SALL4	99	72.233	Procavia_capensis
ENSCHIG00000026270	SALL4	100	79.061	ENSPCOG00000016321	SALL4	93	92.000	Propithecus_coquereli
ENSCHIG00000026270	SALL4	94	78.600	ENSPVAG00000002075	SALL4	94	78.500	Pteropus_vampyrus
ENSCHIG00000026270	SALL4	100	42.128	ENSPNYG00000021738	sall4	100	41.638	Pundamilia_nyererei
ENSCHIG00000026270	SALL4	99	43.519	ENSPNAG00000020929	sall4	99	43.419	Pygocentrus_nattereri
ENSCHIG00000026270	SALL4	100	67.893	ENSRNOG00000050035	Sall4	97	70.803	Rattus_norvegicus
ENSCHIG00000026270	SALL4	100	78.424	ENSRBIG00000039876	SALL4	100	78.810	Rhinopithecus_bieti
ENSCHIG00000026270	SALL4	100	78.518	ENSRROG00000036585	SALL4	100	78.518	Rhinopithecus_roxellana
ENSCHIG00000026270	SALL4	100	78.404	ENSSBOG00000030011	SALL4	93	92.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000026270	SALL4	100	71.090	ENSSHAG00000018013	SALL4	95	71.090	Sarcophilus_harrisii
ENSCHIG00000026270	SALL4	100	42.771	ENSSFOG00015021075	sall4	100	42.783	Scleropages_formosus
ENSCHIG00000026270	SALL4	100	41.812	ENSSMAG00000019218	sall4	99	41.463	Scophthalmus_maximus
ENSCHIG00000026270	SALL4	100	42.796	ENSSDUG00000004657	sall4	100	42.575	Seriola_dumerili
ENSCHIG00000026270	SALL4	100	42.894	ENSSLDG00000004973	sall4	100	42.660	Seriola_lalandi_dorsalis
ENSCHIG00000026270	SALL4	100	42.435	ENSSPAG00000001978	sall4	100	41.552	Stegastes_partitus
ENSCHIG00000026270	SALL4	100	81.895	ENSSSCG00000007479	SALL4	100	81.707	Sus_scrofa
ENSCHIG00000026270	SALL4	100	43.652	ENSTRUG00000007410	sall4	100	43.267	Takifugu_rubripes
ENSCHIG00000026270	SALL4	100	43.348	ENSTNIG00000012460	sall4	100	43.657	Tetraodon_nigroviridis
ENSCHIG00000026270	SALL4	96	79.118	ENSTTRG00000007753	SALL4	99	79.643	Tursiops_truncatus
ENSCHIG00000026270	SALL4	100	81.912	ENSUAMG00000010113	SALL4	100	81.724	Ursus_americanus
ENSCHIG00000026270	SALL4	96	80.174	ENSUMAG00000024274	SALL4	98	81.046	Ursus_maritimus
ENSCHIG00000026270	SALL4	100	46.497	ENSXETG00000012326	sall4	100	46.410	Xenopus_tropicalis
ENSCHIG00000026270	SALL4	100	40.994	ENSXCOG00000015467	sall4	100	40.283	Xiphophorus_couchianus
ENSCHIG00000026270	SALL4	100	40.581	ENSXMAG00000012692	sall4	100	39.877	Xiphophorus_maculatus