EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000026460 (Gene tree)
Gene ID: 102190617
Gene Symbol: YTHDF3
Alias: FLJ31657
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 33828 bases
Position: chr14:53953501-53987328
Accession: 102190617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000032528	YTH	PF04146.15	3.2e-40	1	1
ENSCHIP00000032510	YTH	PF04146.15	3.8e-40	1	1
ENSCHIP00000032524	YTH	PF04146.15	3.9e-40	1	1
ENSCHIP00000032515	YTH	PF04146.15	4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000040390	YTHDF3-202	4493	XM_018058462	ENSCHIP00000032515	585 (aa)	XP_017913951	UPI0008475078
ENSCHIT00000040399	YTHDF3-203	1925	XM_018058459	ENSCHIP00000032524	603 (aa)	XP_017913948	UPI0003AFDDCB
ENSCHIT00000040385	YTHDF3-201	4538	XM_018058460	ENSCHIP00000032510	600 (aa)	XP_017913949	UPI000D18ED8A
ENSCHIT00000040403	YTHDF3-204	1746	-	ENSCHIP00000032528	581 (aa)	-	UPI000D195BB4

Gene Model

Click here to download ENSCHIG00000026460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000026460	YTHDF3	99	67.172	ENSCHIG00000022985	YTHDF2	97	66.146
ENSCHIG00000026460	YTHDF3	97	66.084	ENSCHIG00000026494	YTHDF1	97	57.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026460	YTHDF3	100	98.974	ENSG00000185728	YTHDF3	100	100.000	Homo_sapiens
ENSCHIG00000026460	YTHDF3	100	97.778	ENSAMEG00000018113	YTHDF3	100	97.778	Ailuropoda_melanoleuca
ENSCHIG00000026460	YTHDF3	98	60.946	ENSATEG00000011478	ythdf3	94	93.514	Anabas_testudineus
ENSCHIG00000026460	YTHDF3	98	93.520	ENSAPLG00000011329	YTHDF3	98	92.416	Anas_platyrhynchos
ENSCHIG00000026460	YTHDF3	100	92.479	ENSACAG00000016837	YTHDF3	100	91.795	Anolis_carolinensis
ENSCHIG00000026460	YTHDF3	100	98.803	ENSANAG00000037920	YTHDF3	100	98.803	Aotus_nancymaae
ENSCHIG00000026460	YTHDF3	99	80.311	ENSAMXG00000030366	ythdf3	97	76.701	Astyanax_mexicanus
ENSCHIG00000026460	YTHDF3	100	99.658	ENSBTAG00000018557	YTHDF3	100	99.658	Bos_taurus
ENSCHIG00000026460	YTHDF3	100	98.803	ENSCJAG00000009217	YTHDF3	100	98.803	Callithrix_jacchus
ENSCHIG00000026460	YTHDF3	99	97.942	ENSCAFG00000007215	YTHDF3	99	97.942	Canis_familiaris
ENSCHIG00000026460	YTHDF3	100	98.462	ENSCAFG00020015995	YTHDF3	100	98.502	Canis_lupus_dingo
ENSCHIG00000026460	YTHDF3	100	96.352	ENSTSYG00000009117	YTHDF3	98	98.587	Carlito_syrichta
ENSCHIG00000026460	YTHDF3	99	97.574	ENSCAPG00000014006	YTHDF3	100	97.574	Cavia_aperea
ENSCHIG00000026460	YTHDF3	100	98.291	ENSCPOG00000002961	YTHDF3	100	98.291	Cavia_porcellus
ENSCHIG00000026460	YTHDF3	100	98.632	ENSCCAG00000022316	YTHDF3	100	98.689	Cebus_capucinus
ENSCHIG00000026460	YTHDF3	100	98.974	ENSCATG00000038669	YTHDF3	100	98.974	Cercocebus_atys
ENSCHIG00000026460	YTHDF3	99	98.440	ENSCLAG00000002515	YTHDF3	100	98.440	Chinchilla_lanigera
ENSCHIG00000026460	YTHDF3	100	98.803	ENSCSAG00000014280	YTHDF3	100	98.803	Chlorocebus_sabaeus
ENSCHIG00000026460	YTHDF3	99	96.034	ENSCHOG00000010194	YTHDF3	97	97.691	Choloepus_hoffmanni
ENSCHIG00000026460	YTHDF3	100	92.491	ENSCPBG00000021405	YTHDF3	100	91.809	Chrysemys_picta_bellii
ENSCHIG00000026460	YTHDF3	100	98.974	ENSCANG00000032631	YTHDF3	100	98.974	Colobus_angolensis_palliatus
ENSCHIG00000026460	YTHDF3	100	98.291	ENSCGRG00001021204	Ythdf3	100	98.291	Cricetulus_griseus_chok1gshd
ENSCHIG00000026460	YTHDF3	68	68.101	ENSCGRG00000008289	-	64	73.932	Cricetulus_griseus_crigri
ENSCHIG00000026460	YTHDF3	99	97.747	ENSCGRG00000005613	-	100	97.747	Cricetulus_griseus_crigri
ENSCHIG00000026460	YTHDF3	100	79.605	ENSDARG00000057939	ythdf3	100	75.941	Danio_rerio
ENSCHIG00000026460	YTHDF3	100	97.284	ENSDNOG00000037156	YTHDF3	100	97.284	Dasypus_novemcinctus
ENSCHIG00000026460	YTHDF3	100	98.291	ENSDORG00000014699	Ythdf3	100	98.291	Dipodomys_ordii
ENSCHIG00000026460	YTHDF3	97	98.246	ENSETEG00000007144	YTHDF3	100	98.246	Echinops_telfairi
ENSCHIG00000026460	YTHDF3	100	98.803	ENSEASG00005016224	YTHDF3	100	98.803	Equus_asinus_asinus
ENSCHIG00000026460	YTHDF3	100	98.803	ENSECAG00000011093	YTHDF3	100	98.803	Equus_caballus
ENSCHIG00000026460	YTHDF3	100	98.462	ENSFCAG00000025314	YTHDF3	100	98.462	Felis_catus
ENSCHIG00000026460	YTHDF3	98	93.391	ENSFALG00000005503	YTHDF3	100	92.697	Ficedula_albicollis
ENSCHIG00000026460	YTHDF3	99	98.267	ENSFDAG00000002735	YTHDF3	100	98.267	Fukomys_damarensis
ENSCHIG00000026460	YTHDF3	100	75.325	ENSFHEG00000016395	ythdf3	99	74.617	Fundulus_heteroclitus
ENSCHIG00000026460	YTHDF3	100	93.675	ENSGALG00000039774	YTHDF3	100	92.991	Gallus_gallus
ENSCHIG00000026460	YTHDF3	100	92.321	ENSGAGG00000003851	YTHDF3	100	91.638	Gopherus_agassizii
ENSCHIG00000026460	YTHDF3	100	96.352	ENSGGOG00000027681	YTHDF3	100	99.064	Gorilla_gorilla
ENSCHIG00000026460	YTHDF3	100	98.291	ENSHGLG00000009954	YTHDF3	100	98.291	Heterocephalus_glaber_female
ENSCHIG00000026460	YTHDF3	99	98.267	ENSHGLG00100012403	YTHDF3	100	98.267	Heterocephalus_glaber_male
ENSCHIG00000026460	YTHDF3	100	79.803	ENSIPUG00000014157	YTHDF1	100	77.368	Ictalurus_punctatus
ENSCHIG00000026460	YTHDF3	100	98.291	ENSSTOG00000027792	YTHDF3	100	98.291	Ictidomys_tridecemlineatus
ENSCHIG00000026460	YTHDF3	99	98.440	ENSJJAG00000017742	Ythdf3	100	98.440	Jaculus_jaculus
ENSCHIG00000026460	YTHDF3	98	73.693	ENSKMAG00000008447	ythdf3	97	86.404	Kryptolebias_marmoratus
ENSCHIG00000026460	YTHDF3	100	84.167	ENSLACG00000002281	YTHDF3	100	84.167	Latimeria_chalumnae
ENSCHIG00000026460	YTHDF3	100	96.141	ENSLAFG00000016052	YTHDF3	100	96.141	Loxodonta_africana
ENSCHIG00000026460	YTHDF3	100	98.974	ENSMFAG00000043451	YTHDF3	100	99.064	Macaca_fascicularis
ENSCHIG00000026460	YTHDF3	100	98.974	ENSMMUG00000006729	YTHDF3	100	99.064	Macaca_mulatta
ENSCHIG00000026460	YTHDF3	100	98.974	ENSMNEG00000031200	YTHDF3	100	99.064	Macaca_nemestrina
ENSCHIG00000026460	YTHDF3	100	98.974	ENSMLEG00000036763	YTHDF3	100	98.974	Mandrillus_leucophaeus
ENSCHIG00000026460	YTHDF3	100	92.821	ENSMGAG00000011168	YTHDF3	100	92.137	Meleagris_gallopavo
ENSCHIG00000026460	YTHDF3	67	94.072	ENSMAUG00000012560	Ythdf3	99	93.299	Mesocricetus_auratus
ENSCHIG00000026460	YTHDF3	68	76.709	ENSMICG00000009379	-	100	75.949	Microcebus_murinus
ENSCHIG00000026460	YTHDF3	99	98.789	ENSMICG00000036869	-	99	98.236	Microcebus_murinus
ENSCHIG00000026460	YTHDF3	99	97.747	ENSMOCG00000011947	Ythdf3	100	97.747	Microtus_ochrogaster
ENSCHIG00000026460	YTHDF3	94	78.214	ENSMMOG00000003402	ythdf3	95	89.500	Mola_mola
ENSCHIG00000026460	YTHDF3	100	96.587	ENSMODG00000008255	YTHDF3	100	96.587	Monodelphis_domestica
ENSCHIG00000026460	YTHDF3	99	60.825	ENSMALG00000000147	ythdf3	95	91.878	Monopterus_albus
ENSCHIG00000026460	YTHDF3	100	98.462	MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	Mus_caroli
ENSCHIG00000026460	YTHDF3	100	98.462	ENSMUSG00000047213	Ythdf3	100	98.462	Mus_musculus
ENSCHIG00000026460	YTHDF3	100	97.949	MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	Mus_pahari
ENSCHIG00000026460	YTHDF3	100	98.462	MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	Mus_spretus
ENSCHIG00000026460	YTHDF3	100	98.462	ENSMPUG00000009857	YTHDF3	100	98.462	Mustela_putorius_furo
ENSCHIG00000026460	YTHDF3	99	98.107	ENSMLUG00000006541	YTHDF3	99	98.107	Myotis_lucifugus
ENSCHIG00000026460	YTHDF3	92	98.689	ENSNGAG00000018434	Ythdf3	96	98.507	Nannospalax_galili
ENSCHIG00000026460	YTHDF3	98	72.222	ENSNBRG00000023433	ythdf3	89	87.156	Neolamprologus_brichardi
ENSCHIG00000026460	YTHDF3	100	98.803	ENSNLEG00000003872	YTHDF3	100	98.803	Nomascus_leucogenys
ENSCHIG00000026460	YTHDF3	99	96.041	ENSMEUG00000011285	YTHDF3	100	96.041	Notamacropus_eugenii
ENSCHIG00000026460	YTHDF3	99	97.747	ENSODEG00000002033	YTHDF3	100	97.747	Octodon_degus
ENSCHIG00000026460	YTHDF3	99	92.427	ENSOANG00000005053	YTHDF3	100	90.706	Ornithorhynchus_anatinus
ENSCHIG00000026460	YTHDF3	100	97.311	ENSOCUG00000008723	YTHDF3	100	97.311	Oryctolagus_cuniculus
ENSCHIG00000026460	YTHDF3	99	75.986	ENSOMEG00000008212	ythdf3	99	75.472	Oryzias_melastigma
ENSCHIG00000026460	YTHDF3	99	98.116	ENSOGAG00000002302	YTHDF3	99	98.116	Otolemur_garnettii
ENSCHIG00000026460	YTHDF3	100	100.000	ENSOARG00000016882	YTHDF3	100	100.000	Ovis_aries
ENSCHIG00000026460	YTHDF3	100	98.632	ENSPPAG00000043483	YTHDF3	100	98.632	Pan_paniscus
ENSCHIG00000026460	YTHDF3	100	98.462	ENSPPRG00000004665	YTHDF3	100	98.462	Panthera_pardus
ENSCHIG00000026460	YTHDF3	100	96.020	ENSPTIG00000021537	YTHDF3	100	98.502	Panthera_tigris_altaica
ENSCHIG00000026460	YTHDF3	100	98.803	ENSPTRG00000049135	YTHDF3	100	98.803	Pan_troglodytes
ENSCHIG00000026460	YTHDF3	100	98.974	ENSPANG00000008030	YTHDF3	100	98.974	Papio_anubis
ENSCHIG00000026460	YTHDF3	99	78.655	ENSPKIG00000008298	ythdf3	97	80.560	Paramormyrops_kingsleyae
ENSCHIG00000026460	YTHDF3	100	94.198	ENSPSIG00000015861	YTHDF3	100	93.515	Pelodiscus_sinensis
ENSCHIG00000026460	YTHDF3	99	98.614	ENSPEMG00000020975	Ythdf3	100	98.614	Peromyscus_maniculatus_bairdii
ENSCHIG00000026460	YTHDF3	100	96.758	ENSPCIG00000017629	YTHDF3	100	96.758	Phascolarctos_cinereus
ENSCHIG00000026460	YTHDF3	91	98.936	ENSPPYG00000018626	YTHDF3	100	97.579	Pongo_abelii
ENSCHIG00000026460	YTHDF3	99	97.414	ENSPCAG00000016282	YTHDF3	100	97.414	Procavia_capensis
ENSCHIG00000026460	YTHDF3	100	98.803	ENSPCOG00000004856	YTHDF3	100	98.803	Propithecus_coquereli
ENSCHIG00000026460	YTHDF3	85	99.468	ENSPVAG00000002740	YTHDF3	86	99.468	Pteropus_vampyrus
ENSCHIG00000026460	YTHDF3	94	75.887	ENSPNYG00000002949	ythdf3	99	86.957	Pundamilia_nyererei
ENSCHIG00000026460	YTHDF3	100	98.291	ENSRNOG00000010084	Ythdf3	100	98.291	Rattus_norvegicus
ENSCHIG00000026460	YTHDF3	100	98.803	ENSRBIG00000036465	YTHDF3	100	98.803	Rhinopithecus_bieti
ENSCHIG00000026460	YTHDF3	100	98.632	ENSRROG00000035231	YTHDF3	100	98.632	Rhinopithecus_roxellana
ENSCHIG00000026460	YTHDF3	100	98.803	ENSSBOG00000035287	YTHDF3	100	98.803	Saimiri_boliviensis_boliviensis
ENSCHIG00000026460	YTHDF3	100	96.422	ENSSHAG00000009482	YTHDF3	100	96.422	Sarcophilus_harrisii
ENSCHIG00000026460	YTHDF3	85	90.393	ENSSFOG00015015445	ythdf3	97	75.709	Scleropages_formosus
ENSCHIG00000026460	YTHDF3	98	98.239	ENSSARG00000007626	YTHDF3	99	98.596	Sorex_araneus
ENSCHIG00000026460	YTHDF3	99	92.586	ENSSPUG00000009390	YTHDF3	98	91.901	Sphenodon_punctatus
ENSCHIG00000026460	YTHDF3	91	98.876	ENSSSCG00000033144	YTHDF3	100	98.876	Sus_scrofa
ENSCHIG00000026460	YTHDF3	98	93.194	ENSTGUG00000011243	YTHDF3	99	92.430	Taeniopygia_guttata
ENSCHIG00000026460	YTHDF3	80	97.867	ENSTBEG00000005747	YTHDF3	81	97.867	Tupaia_belangeri
ENSCHIG00000026460	YTHDF3	99	90.000	ENSTTRG00000014564	YTHDF3	98	89.437	Tursiops_truncatus
ENSCHIG00000026460	YTHDF3	100	98.632	ENSUAMG00000012624	YTHDF3	100	98.632	Ursus_americanus
ENSCHIG00000026460	YTHDF3	100	96.186	ENSUMAG00000014104	YTHDF3	100	96.186	Ursus_maritimus
ENSCHIG00000026460	YTHDF3	99	85.542	ENSVPAG00000008104	YTHDF3	97	85.487	Vicugna_pacos
ENSCHIG00000026460	YTHDF3	100	98.462	ENSVVUG00000018384	YTHDF3	100	98.462	Vulpes_vulpes
ENSCHIG00000026460	YTHDF3	100	88.718	ENSXETG00000021659	ythdf3	100	88.547	Xenopus_tropicalis
ENSCHIG00000026460	YTHDF3	99	75.209	ENSXCOG00000009687	ythdf3	99	76.117	Xiphophorus_couchianus
ENSCHIG00000026460	YTHDF3	100	75.689	ENSXMAG00000009698	ythdf3	99	76.460	Xiphophorus_maculatus