EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000026530 (Gene tree)
Gene ID: 102172416
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 63057 bases
Position: chr29:35349455-35412511
Accession: 102172416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000032684	zf-C2H2	PF00096.26	4.7e-33	1	5
ENSCHIP00000032684	zf-C2H2	PF00096.26	4.7e-33	2	5
ENSCHIP00000032684	zf-C2H2	PF00096.26	4.7e-33	3	5
ENSCHIP00000032684	zf-C2H2	PF00096.26	4.7e-33	4	5
ENSCHIP00000032684	zf-C2H2	PF00096.26	4.7e-33	5	5
ENSCHIP00000032667	zf-C2H2	PF00096.26	4.8e-33	1	5
ENSCHIP00000032667	zf-C2H2	PF00096.26	4.8e-33	2	5
ENSCHIP00000032667	zf-C2H2	PF00096.26	4.8e-33	3	5
ENSCHIP00000032667	zf-C2H2	PF00096.26	4.8e-33	4	5
ENSCHIP00000032667	zf-C2H2	PF00096.26	4.8e-33	5	5
ENSCHIP00000032660	zf-C2H2	PF00096.26	7.6e-33	1	5
ENSCHIP00000032660	zf-C2H2	PF00096.26	7.6e-33	2	5
ENSCHIP00000032660	zf-C2H2	PF00096.26	7.6e-33	3	5
ENSCHIP00000032660	zf-C2H2	PF00096.26	7.6e-33	4	5
ENSCHIP00000032660	zf-C2H2	PF00096.26	7.6e-33	5	5
ENSCHIP00000032667	zf-met	PF12874.7	6.1e-06	1	2
ENSCHIP00000032667	zf-met	PF12874.7	6.1e-06	2	2
ENSCHIP00000032684	zf-met	PF12874.7	6.1e-06	1	2
ENSCHIP00000032684	zf-met	PF12874.7	6.1e-06	2	2
ENSCHIP00000032660	zf-met	PF12874.7	6.9e-06	1	2
ENSCHIP00000032660	zf-met	PF12874.7	6.9e-06	2	2
ENSCHIP00000032684	zf-C2H2_jaz	PF12171.8	5.3e-17	1	1
ENSCHIP00000032667	zf-C2H2_jaz	PF12171.8	5.9e-17	1	1
ENSCHIP00000032660	zf-C2H2_jaz	PF12171.8	8.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000040543	PRDM10-202	6246	XM_013975851	ENSCHIP00000032667	1103 (aa)	XP_013831305	UPI0006B1119E
ENSCHIT00000040560	PRDM10-203	3312	-	ENSCHIP00000032684	1103 (aa)	-	UPI000D195AB6
ENSCHIT00000040536	PRDM10-201	6387	XM_005699638	ENSCHIP00000032660	1150 (aa)	XP_005699695	UPI0003AF763D

Gene Model

Click here to download ENSCHIG00000026530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026530	PRDM10	100	93.253	ENSG00000170325	PRDM10	100	93.858	Homo_sapiens
ENSCHIG00000026530	PRDM10	100	90.871	ENSAMEG00000002425	PRDM10	100	91.206	Ailuropoda_melanoleuca
ENSCHIG00000026530	PRDM10	100	84.197	ENSAPLG00000004858	PRDM10	100	84.728	Anas_platyrhynchos
ENSCHIG00000026530	PRDM10	100	86.711	ENSANAG00000022064	PRDM10	100	78.861	Aotus_nancymaae
ENSCHIG00000026530	PRDM10	100	99.391	ENSBTAG00000019001	PRDM10	100	99.608	Bos_taurus
ENSCHIG00000026530	PRDM10	100	93.506	ENSCJAG00000009235	PRDM10	100	94.026	Callithrix_jacchus
ENSCHIG00000026530	PRDM10	100	92.795	ENSCAFG00000010164	PRDM10	100	93.142	Canis_familiaris
ENSCHIG00000026530	PRDM10	100	94.299	ENSCAFG00020010152	PRDM10	100	94.661	Canis_lupus_dingo
ENSCHIG00000026530	PRDM10	100	94.031	ENSTSYG00000000544	PRDM10	100	94.550	Carlito_syrichta
ENSCHIG00000026530	PRDM10	100	84.734	ENSCAPG00000017296	PRDM10	98	87.097	Cavia_aperea
ENSCHIG00000026530	PRDM10	99	79.563	ENSCPOG00000000389	PRDM10	98	85.601	Cavia_porcellus
ENSCHIG00000026530	PRDM10	100	93.333	ENSCCAG00000024567	PRDM10	100	93.939	Cebus_capucinus
ENSCHIG00000026530	PRDM10	100	93.588	ENSCATG00000040031	PRDM10	100	94.281	Cercocebus_atys
ENSCHIG00000026530	PRDM10	100	89.889	ENSCLAG00000014605	PRDM10	100	90.660	Chinchilla_lanigera
ENSCHIG00000026530	PRDM10	100	93.674	ENSCSAG00000002202	PRDM10	100	94.454	Chlorocebus_sabaeus
ENSCHIG00000026530	PRDM10	100	81.985	ENSCPBG00000026880	PRDM10	99	81.818	Chrysemys_picta_bellii
ENSCHIG00000026530	PRDM10	100	93.420	ENSCANG00000032669	PRDM10	100	94.026	Colobus_angolensis_palliatus
ENSCHIG00000026530	PRDM10	100	91.169	ENSCGRG00001021647	Prdm10	98	91.522	Cricetulus_griseus_chok1gshd
ENSCHIG00000026530	PRDM10	100	91.169	ENSCGRG00000006562	Prdm10	98	91.522	Cricetulus_griseus_crigri
ENSCHIG00000026530	PRDM10	86	93.987	ENSDNOG00000001366	PRDM10	95	93.987	Dasypus_novemcinctus
ENSCHIG00000026530	PRDM10	100	92.194	ENSDORG00000014292	Prdm10	100	92.368	Dipodomys_ordii
ENSCHIG00000026530	PRDM10	100	95.139	ENSEASG00005022914	PRDM10	100	95.486	Equus_asinus_asinus
ENSCHIG00000026530	PRDM10	100	95.052	ENSECAG00000011499	PRDM10	100	95.399	Equus_caballus
ENSCHIG00000026530	PRDM10	98	94.867	ENSFCAG00000004111	PRDM10	96	95.221	Felis_catus
ENSCHIG00000026530	PRDM10	100	80.451	ENSFALG00000004873	PRDM10	100	80.284	Ficedula_albicollis
ENSCHIG00000026530	PRDM10	100	89.340	ENSFDAG00000017311	PRDM10	100	89.594	Fukomys_damarensis
ENSCHIG00000026530	PRDM10	97	85.085	ENSGALG00000033660	PRDM10	99	85.458	Gallus_gallus
ENSCHIG00000026530	PRDM10	98	60.119	ENSGACG00000012293	prdm10	99	65.432	Gasterosteus_aculeatus
ENSCHIG00000026530	PRDM10	100	82.717	ENSGAGG00000012523	PRDM10	99	82.889	Gopherus_agassizii
ENSCHIG00000026530	PRDM10	100	93.691	ENSGGOG00000015359	PRDM10	100	94.296	Gorilla_gorilla
ENSCHIG00000026530	PRDM10	100	89.523	ENSHGLG00000001106	PRDM10	100	90.204	Heterocephalus_glaber_female
ENSCHIG00000026530	PRDM10	100	89.846	ENSHGLG00100002350	PRDM10	100	90.358	Heterocephalus_glaber_male
ENSCHIG00000026530	PRDM10	100	93.680	ENSSTOG00000002015	PRDM10	100	94.199	Ictidomys_tridecemlineatus
ENSCHIG00000026530	PRDM10	100	87.433	ENSJJAG00000021493	Prdm10	100	87.611	Jaculus_jaculus
ENSCHIG00000026530	PRDM10	100	89.252	ENSLAFG00000031867	PRDM10	100	89.940	Loxodonta_africana
ENSCHIG00000026530	PRDM10	100	93.761	ENSMFAG00000031008	PRDM10	100	94.454	Macaca_fascicularis
ENSCHIG00000026530	PRDM10	100	93.761	ENSMMUG00000017555	PRDM10	100	94.454	Macaca_mulatta
ENSCHIG00000026530	PRDM10	100	93.674	ENSMNEG00000036493	PRDM10	100	94.367	Macaca_nemestrina
ENSCHIG00000026530	PRDM10	94	94.118	ENSMLEG00000042028	PRDM10	100	94.118	Mandrillus_leucophaeus
ENSCHIG00000026530	PRDM10	100	81.255	ENSMGAG00000001112	PRDM10	100	81.856	Meleagris_gallopavo
ENSCHIG00000026530	PRDM10	100	93.588	ENSMICG00000013888	PRDM10	100	94.107	Microcebus_murinus
ENSCHIG00000026530	PRDM10	100	89.924	ENSMOCG00000021853	Prdm10	100	89.924	Microtus_ochrogaster
ENSCHIG00000026530	PRDM10	77	84.790	ENSMODG00000004979	PRDM10	99	86.848	Monodelphis_domestica
ENSCHIG00000026530	PRDM10	100	91.129	ENSMUSG00000042496	Prdm10	100	91.585	Mus_musculus
ENSCHIG00000026530	PRDM10	100	91.192	MGP_SPRETEiJ_G0033061	-	100	91.631	Mus_spretus
ENSCHIG00000026530	PRDM10	100	94.705	ENSMPUG00000008711	PRDM10	99	94.965	Mustela_putorius_furo
ENSCHIG00000026530	PRDM10	100	93.939	ENSMLUG00000013051	PRDM10	100	94.550	Myotis_lucifugus
ENSCHIG00000026530	PRDM10	100	93.056	ENSNGAG00000000580	Prdm10	100	93.322	Nannospalax_galili
ENSCHIG00000026530	PRDM10	100	93.761	ENSNLEG00000007488	PRDM10	100	94.454	Nomascus_leucogenys
ENSCHIG00000026530	PRDM10	100	89.201	ENSODEG00000005309	PRDM10	99	93.506	Octodon_degus
ENSCHIG00000026530	PRDM10	100	79.352	ENSOANG00000000577	-	100	78.584	Ornithorhynchus_anatinus
ENSCHIG00000026530	PRDM10	100	92.361	ENSOCUG00000003736	PRDM10	100	92.975	Oryctolagus_cuniculus
ENSCHIG00000026530	PRDM10	100	92.487	ENSOGAG00000010723	PRDM10	100	92.746	Otolemur_garnettii
ENSCHIG00000026530	PRDM10	100	99.826	ENSOARG00000014507	PRDM10	100	99.826	Ovis_aries
ENSCHIG00000026530	PRDM10	100	93.518	ENSPPAG00000042881	PRDM10	100	94.123	Pan_paniscus
ENSCHIG00000026530	PRDM10	100	94.618	ENSPPRG00000007002	PRDM10	100	94.965	Panthera_pardus
ENSCHIG00000026530	PRDM10	100	94.531	ENSPTIG00000013331	PRDM10	100	94.878	Panthera_tigris_altaica
ENSCHIG00000026530	PRDM10	100	93.691	ENSPTRG00000004477	PRDM10	100	94.296	Pan_troglodytes
ENSCHIG00000026530	PRDM10	100	93.588	ENSPANG00000017470	PRDM10	100	94.281	Papio_anubis
ENSCHIG00000026530	PRDM10	100	90.468	ENSPEMG00000014985	Prdm10	100	90.468	Peromyscus_maniculatus_bairdii
ENSCHIG00000026530	PRDM10	100	93.685	ENSPPYG00000004061	PRDM10	100	94.291	Pongo_abelii
ENSCHIG00000026530	PRDM10	92	83.100	ENSPCAG00000014514	PRDM10	100	83.380	Procavia_capensis
ENSCHIG00000026530	PRDM10	100	86.957	ENSPCOG00000023406	PRDM10	100	80.640	Propithecus_coquereli
ENSCHIG00000026530	PRDM10	100	94.723	ENSPVAG00000012764	PRDM10	100	95.069	Pteropus_vampyrus
ENSCHIG00000026530	PRDM10	100	91.681	ENSRNOG00000007853	Prdm10	100	92.121	Rattus_norvegicus
ENSCHIG00000026530	PRDM10	100	93.426	ENSRBIG00000030924	PRDM10	100	94.031	Rhinopithecus_bieti
ENSCHIG00000026530	PRDM10	100	93.426	ENSRROG00000034334	PRDM10	100	94.031	Rhinopithecus_roxellana
ENSCHIG00000026530	PRDM10	100	93.426	ENSSBOG00000008773	PRDM10	100	94.031	Saimiri_boliviensis_boliviensis
ENSCHIG00000026530	PRDM10	99	86.034	ENSSHAG00000004503	PRDM10	99	86.994	Sarcophilus_harrisii
ENSCHIG00000026530	PRDM10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSCHIG00000026530	PRDM10	100	84.291	ENSSPUG00000001178	PRDM10	99	84.395	Sphenodon_punctatus
ENSCHIG00000026530	PRDM10	100	94.632	ENSSSCG00000015243	PRDM10	100	94.867	Sus_scrofa
ENSCHIG00000026530	PRDM10	100	82.515	ENSTGUG00000000530	PRDM10	100	83.133	Taeniopygia_guttata
ENSCHIG00000026530	PRDM10	95	92.699	ENSTBEG00000007221	PRDM10	94	92.699	Tupaia_belangeri
ENSCHIG00000026530	PRDM10	100	94.367	ENSTTRG00000009189	PRDM10	100	94.021	Tursiops_truncatus
ENSCHIG00000026530	PRDM10	91	94.444	ENSUAMG00000018832	PRDM10	96	94.444	Ursus_americanus
ENSCHIG00000026530	PRDM10	100	92.024	ENSUMAG00000003167	PRDM10	99	94.882	Ursus_maritimus
ENSCHIG00000026530	PRDM10	100	94.010	ENSVVUG00000019878	PRDM10	100	94.358	Vulpes_vulpes
ENSCHIG00000026530	PRDM10	100	68.509	ENSXETG00000032173	PRDM10	100	68.562	Xenopus_tropicalis