EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000026716 (Gene tree)
Gene ID: 102172365
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 115641 bases
Position: chr12:50114390-50230030
Accession: 102172365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000032984	TUDOR	PF00567.24	3.6e-86	1	5
ENSCHIP00000032984	TUDOR	PF00567.24	3.6e-86	2	5
ENSCHIP00000032984	TUDOR	PF00567.24	3.6e-86	3	5
ENSCHIP00000032984	TUDOR	PF00567.24	3.6e-86	4	5
ENSCHIP00000032984	TUDOR	PF00567.24	3.6e-86	5	5
ENSCHIP00000032980	TUDOR	PF00567.24	4.3e-86	1	5
ENSCHIP00000032980	TUDOR	PF00567.24	4.3e-86	2	5
ENSCHIP00000032980	TUDOR	PF00567.24	4.3e-86	3	5
ENSCHIP00000032980	TUDOR	PF00567.24	4.3e-86	4	5
ENSCHIP00000032980	TUDOR	PF00567.24	4.3e-86	5	5
ENSCHIP00000032987	TUDOR	PF00567.24	2.9e-50	1	3
ENSCHIP00000032987	TUDOR	PF00567.24	2.9e-50	2	3
ENSCHIP00000032987	TUDOR	PF00567.24	2.9e-50	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000040861	RNF17-202	4563	XM_018056328	ENSCHIP00000032984	1520 (aa)	XP_017911817	UPI000D194947
ENSCHIT00000040857	RNF17-201	4656	-	ENSCHIP00000032980	1551 (aa)	-	UPI000D18F2A3
ENSCHIT00000040864	RNF17-203	1899	-	ENSCHIP00000032987	632 (aa)	-	UPI000D18E787

Gene Model

Click here to download ENSCHIG00000026716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000026716	RNF17	69	30.841	ENSCHIG00000012766	TDRD1	61	32.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026716	RNF17	100	83.096	ENSG00000132972	RNF17	100	83.096	Homo_sapiens
ENSCHIG00000026716	RNF17	87	35.069	ENSAPOG00000017034	rnf17	89	32.940	Acanthochromis_polyacanthus
ENSCHIG00000026716	RNF17	100	85.078	ENSAMEG00000017340	RNF17	97	85.226	Ailuropoda_melanoleuca
ENSCHIG00000026716	RNF17	98	39.706	ENSAOCG00000018283	rnf17	91	33.527	Amphiprion_ocellaris
ENSCHIG00000026716	RNF17	98	34.251	ENSAPEG00000022338	rnf17	84	33.630	Amphiprion_percula
ENSCHIG00000026716	RNF17	87	36.097	ENSATEG00000002067	rnf17	94	33.119	Anabas_testudineus
ENSCHIG00000026716	RNF17	100	49.778	ENSAPLG00000003969	RNF17	99	49.177	Anas_platyrhynchos
ENSCHIG00000026716	RNF17	99	47.788	ENSACAG00000001418	RNF17	89	46.478	Anolis_carolinensis
ENSCHIG00000026716	RNF17	95	73.147	ENSANAG00000029969	RNF17	95	77.093	Aotus_nancymaae
ENSCHIG00000026716	RNF17	99	36.041	ENSACLG00000018279	rnf17	75	34.560	Astatotilapia_calliptera
ENSCHIG00000026716	RNF17	99	35.469	ENSAMXG00000011002	rnf17	98	31.395	Astyanax_mexicanus
ENSCHIG00000026716	RNF17	100	97.785	ENSBTAG00000000278	RNF17	100	97.785	Bos_taurus
ENSCHIG00000026716	RNF17	100	82.306	ENSCJAG00000018937	RNF17	100	82.306	Callithrix_jacchus
ENSCHIG00000026716	RNF17	98	84.143	ENSCAFG00000007418	RNF17	100	82.017	Canis_familiaris
ENSCHIG00000026716	RNF17	100	86.709	ENSCAFG00020002919	-	100	86.709	Canis_lupus_dingo
ENSCHIG00000026716	RNF17	100	81.102	ENSTSYG00000000365	RNF17	99	81.102	Carlito_syrichta
ENSCHIG00000026716	RNF17	100	59.375	ENSCAPG00000012908	RNF17	90	66.255	Cavia_aperea
ENSCHIG00000026716	RNF17	100	82.938	ENSCCAG00000026725	RNF17	99	82.938	Cebus_capucinus
ENSCHIG00000026716	RNF17	100	83.570	ENSCATG00000040352	RNF17	100	83.570	Cercocebus_atys
ENSCHIG00000026716	RNF17	99	80.715	ENSCLAG00000004127	RNF17	100	73.321	Chinchilla_lanigera
ENSCHIG00000026716	RNF17	99	79.569	ENSCSAG00000018019	RNF17	91	79.123	Chlorocebus_sabaeus
ENSCHIG00000026716	RNF17	87	86.383	ENSCHOG00000013310	RNF17	80	86.383	Choloepus_hoffmanni
ENSCHIG00000026716	RNF17	100	58.088	ENSCPBG00000020920	RNF17	93	58.900	Chrysemys_picta_bellii
ENSCHIG00000026716	RNF17	99	83.544	ENSCANG00000032927	RNF17	99	83.544	Colobus_angolensis_palliatus
ENSCHIG00000026716	RNF17	100	77.300	ENSCGRG00001022658	Rnf17	97	77.395	Cricetulus_griseus_chok1gshd
ENSCHIG00000026716	RNF17	100	77.300	ENSCGRG00000009924	Rnf17	97	77.395	Cricetulus_griseus_crigri
ENSCHIG00000026716	RNF17	98	32.866	ENSCSEG00000008626	rnf17	80	32.385	Cynoglossus_semilaevis
ENSCHIG00000026716	RNF17	72	42.143	ENSCVAG00000017008	rnf17	81	36.389	Cyprinodon_variegatus
ENSCHIG00000026716	RNF17	98	33.830	ENSDARG00000056387	rnf17	74	33.470	Danio_rerio
ENSCHIG00000026716	RNF17	99	83.756	ENSDNOG00000006115	RNF17	97	83.905	Dasypus_novemcinctus
ENSCHIG00000026716	RNF17	68	78.555	ENSETEG00000017874	-	63	78.555	Echinops_telfairi
ENSCHIG00000026716	RNF17	100	85.759	ENSEASG00005001421	-	99	91.228	Equus_asinus_asinus
ENSCHIG00000026716	RNF17	99	86.840	ENSECAG00000017152	RNF17	95	84.425	Equus_caballus
ENSCHIG00000026716	RNF17	78	72.727	ENSEEUG00000000332	RNF17	81	72.727	Erinaceus_europaeus
ENSCHIG00000026716	RNF17	99	37.004	ENSELUG00000005626	rnf17	98	32.032	Esox_lucius
ENSCHIG00000026716	RNF17	100	89.557	ENSFCAG00000004914	RNF17	100	89.557	Felis_catus
ENSCHIG00000026716	RNF17	100	48.407	ENSFALG00000008766	RNF17	79	52.142	Ficedula_albicollis
ENSCHIG00000026716	RNF17	100	78.943	ENSFDAG00000017857	RNF17	97	79.092	Fukomys_damarensis
ENSCHIG00000026716	RNF17	99	34.074	ENSFHEG00000014822	rnf17	74	34.454	Fundulus_heteroclitus
ENSCHIG00000026716	RNF17	69	39.130	ENSGMOG00000015560	-	100	34.623	Gadus_morhua
ENSCHIG00000026716	RNF17	100	48.750	ENSGALG00000045414	-	100	49.219	Gallus_gallus
ENSCHIG00000026716	RNF17	99	31.873	ENSGAFG00000004463	rnf17	89	32.303	Gambusia_affinis
ENSCHIG00000026716	RNF17	62	35.171	ENSGACG00000001340	-	100	38.028	Gasterosteus_aculeatus
ENSCHIG00000026716	RNF17	89	58.873	ENSGAGG00000016999	RNF17	86	56.969	Gopherus_agassizii
ENSCHIG00000026716	RNF17	100	83.728	ENSGGOG00000014491	RNF17	100	83.728	Gorilla_gorilla
ENSCHIG00000026716	RNF17	98	36.296	ENSHBUG00000003554	rnf17	75	34.480	Haplochromis_burtoni
ENSCHIG00000026716	RNF17	99	79.495	ENSHGLG00000007270	RNF17	97	77.486	Heterocephalus_glaber_female
ENSCHIG00000026716	RNF17	100	78.777	ENSHGLG00100017393	RNF17	97	78.918	Heterocephalus_glaber_male
ENSCHIG00000026716	RNF17	76	39.855	ENSHCOG00000017676	rnf17	79	39.855	Hippocampus_comes
ENSCHIG00000026716	RNF17	99	36.377	ENSIPUG00000001087	rnf17	91	33.054	Ictalurus_punctatus
ENSCHIG00000026716	RNF17	100	80.253	ENSSTOG00000011255	-	100	80.253	Ictidomys_tridecemlineatus
ENSCHIG00000026716	RNF17	100	77.745	ENSJJAG00000016584	Rnf17	96	77.602	Jaculus_jaculus
ENSCHIG00000026716	RNF17	99	35.052	ENSKMAG00000013403	rnf17	73	35.008	Kryptolebias_marmoratus
ENSCHIG00000026716	RNF17	85	32.148	ENSLBEG00000014910	rnf17	73	34.125	Labrus_bergylta
ENSCHIG00000026716	RNF17	94	52.756	ENSLACG00000000323	RNF17	81	53.838	Latimeria_chalumnae
ENSCHIG00000026716	RNF17	99	34.963	ENSLOCG00000010768	rnf17	87	31.077	Lepisosteus_oculatus
ENSCHIG00000026716	RNF17	100	83.412	ENSMFAG00000032388	RNF17	100	83.412	Macaca_fascicularis
ENSCHIG00000026716	RNF17	100	83.412	ENSMMUG00000014610	RNF17	100	83.412	Macaca_mulatta
ENSCHIG00000026716	RNF17	100	83.254	ENSMNEG00000011234	RNF17	100	83.254	Macaca_nemestrina
ENSCHIG00000026716	RNF17	100	81.962	ENSMLEG00000030227	RNF17	100	74.659	Mandrillus_leucophaeus
ENSCHIG00000026716	RNF17	99	34.933	ENSMAMG00000020403	rnf17	86	33.911	Mastacembelus_armatus
ENSCHIG00000026716	RNF17	99	36.041	ENSMZEG00005019166	rnf17	75	34.640	Maylandia_zebra
ENSCHIG00000026716	RNF17	100	47.647	ENSMGAG00000015138	RNF17	100	51.183	Meleagris_gallopavo
ENSCHIG00000026716	RNF17	100	76.261	ENSMAUG00000004788	Rnf17	95	74.077	Mesocricetus_auratus
ENSCHIG00000026716	RNF17	100	87.500	ENSMICG00000010364	RNF17	100	87.500	Microcebus_murinus
ENSCHIG00000026716	RNF17	100	74.629	ENSMOCG00000011818	-	100	80.230	Microtus_ochrogaster
ENSCHIG00000026716	RNF17	98	34.455	ENSMMOG00000019514	rnf17	84	40.288	Mola_mola
ENSCHIG00000026716	RNF17	97	71.772	ENSMODG00000007827	RNF17	94	69.517	Monodelphis_domestica
ENSCHIG00000026716	RNF17	87	41.176	ENSMALG00000016943	rnf17	89	41.176	Monopterus_albus
ENSCHIG00000026716	RNF17	99	78.736	MGP_CAROLIEiJ_G0019337	Rnf17	92	78.885	Mus_caroli
ENSCHIG00000026716	RNF17	100	76.409	ENSMUSG00000000365	Rnf17	92	78.380	Mus_musculus
ENSCHIG00000026716	RNF17	99	78.455	MGP_PahariEiJ_G0030355	Rnf17	92	78.603	Mus_pahari
ENSCHIG00000026716	RNF17	99	78.380	MGP_SPRETEiJ_G0020228	Rnf17	92	78.529	Mus_spretus
ENSCHIG00000026716	RNF17	100	84.781	ENSMPUG00000013305	RNF17	97	84.929	Mustela_putorius_furo
ENSCHIG00000026716	RNF17	100	82.641	ENSMLUG00000003903	RNF17	99	79.556	Myotis_lucifugus
ENSCHIG00000026716	RNF17	98	78.380	ENSNGAG00000013553	Rnf17	97	76.223	Nannospalax_galili
ENSCHIG00000026716	RNF17	99	34.644	ENSNBRG00000012006	rnf17	84	35.054	Neolamprologus_brichardi
ENSCHIG00000026716	RNF17	100	82.938	ENSNLEG00000013780	RNF17	100	82.938	Nomascus_leucogenys
ENSCHIG00000026716	RNF17	61	88.060	ENSMEUG00000003276	-	60	69.589	Notamacropus_eugenii
ENSCHIG00000026716	RNF17	91	71.743	ENSOPRG00000016743	-	87	71.695	Ochotona_princeps
ENSCHIG00000026716	RNF17	100	74.724	ENSODEG00000005443	-	100	74.724	Octodon_degus
ENSCHIG00000026716	RNF17	99	41.176	ENSONIG00000015746	rnf17	96	41.429	Oreochromis_niloticus
ENSCHIG00000026716	RNF17	99	83.569	ENSOCUG00000007384	RNF17	97	81.323	Oryctolagus_cuniculus
ENSCHIG00000026716	RNF17	98	35.660	ENSORLG00000012818	rnf17	98	32.429	Oryzias_latipes
ENSCHIG00000026716	RNF17	98	35.812	ENSORLG00020009879	-	98	31.132	Oryzias_latipes_hni
ENSCHIG00000026716	RNF17	98	35.812	ENSORLG00015013027	-	98	31.140	Oryzias_latipes_hsok
ENSCHIG00000026716	RNF17	88	35.326	ENSOMEG00000009891	rnf17	89	32.554	Oryzias_melastigma
ENSCHIG00000026716	RNF17	100	80.741	ENSOGAG00000014803	RNF17	91	81.663	Otolemur_garnettii
ENSCHIG00000026716	RNF17	98	98.885	ENSOARG00000014641	RNF17	95	96.276	Ovis_aries
ENSCHIG00000026716	RNF17	100	83.254	ENSPPAG00000028779	RNF17	100	83.254	Pan_paniscus
ENSCHIG00000026716	RNF17	100	89.399	ENSPPRG00000009230	RNF17	100	89.399	Panthera_pardus
ENSCHIG00000026716	RNF17	100	89.557	ENSPTIG00000001738	RNF17	100	89.557	Panthera_tigris_altaica
ENSCHIG00000026716	RNF17	100	83.096	ENSPTRG00000005713	RNF17	100	83.096	Pan_troglodytes
ENSCHIG00000026716	RNF17	100	83.570	ENSPANG00000007640	RNF17	100	83.570	Papio_anubis
ENSCHIG00000026716	RNF17	99	34.970	ENSPKIG00000001648	rnf17	91	35.829	Paramormyrops_kingsleyae
ENSCHIG00000026716	RNF17	100	57.478	ENSPSIG00000011245	RNF17	100	63.145	Pelodiscus_sinensis
ENSCHIG00000026716	RNF17	100	77.003	ENSPEMG00000008693	Rnf17	96	76.918	Peromyscus_maniculatus_bairdii
ENSCHIG00000026716	RNF17	88	71.618	ENSPCIG00000009190	-	92	72.062	Phascolarctos_cinereus
ENSCHIG00000026716	RNF17	98	35.000	ENSPFOG00000007124	rnf17	87	32.745	Poecilia_formosa
ENSCHIG00000026716	RNF17	98	35.196	ENSPLAG00000006198	rnf17	87	32.805	Poecilia_latipinna
ENSCHIG00000026716	RNF17	98	35.498	ENSPMEG00000022432	rnf17	90	32.241	Poecilia_mexicana
ENSCHIG00000026716	RNF17	98	36.765	ENSPREG00000001414	rnf17	81	42.754	Poecilia_reticulata
ENSCHIG00000026716	RNF17	99	79.643	ENSPPYG00000005215	RNF17	96	76.168	Pongo_abelii
ENSCHIG00000026716	RNF17	69	89.189	ENSPCAG00000002665	RNF17	73	89.189	Procavia_capensis
ENSCHIG00000026716	RNF17	100	62.675	ENSPCOG00000020211	RNF17	100	62.675	Propithecus_coquereli
ENSCHIG00000026716	RNF17	100	74.302	ENSPVAG00000013021	RNF17	95	74.449	Pteropus_vampyrus
ENSCHIG00000026716	RNF17	99	33.733	ENSPNAG00000027505	rnf17	85	35.255	Pygocentrus_nattereri
ENSCHIG00000026716	RNF17	100	78.009	ENSRNOG00000008059	Rnf17	97	78.158	Rattus_norvegicus
ENSCHIG00000026716	RNF17	100	82.938	ENSRBIG00000027010	RNF17	100	74.479	Rhinopithecus_bieti
ENSCHIG00000026716	RNF17	100	82.938	ENSRROG00000022801	RNF17	100	82.938	Rhinopithecus_roxellana
ENSCHIG00000026716	RNF17	100	83.412	ENSSBOG00000021661	RNF17	99	83.412	Saimiri_boliviensis_boliviensis
ENSCHIG00000026716	RNF17	99	69.891	ENSSHAG00000005609	RNF17	95	69.263	Sarcophilus_harrisii
ENSCHIG00000026716	RNF17	99	36.089	ENSSFOG00015023037	rnf17	89	45.625	Scleropages_formosus
ENSCHIG00000026716	RNF17	83	33.333	ENSSMAG00000007429	rnf17	75	32.840	Scophthalmus_maximus
ENSCHIG00000026716	RNF17	83	33.962	ENSSDUG00000013530	rnf17	78	33.825	Seriola_dumerili
ENSCHIG00000026716	RNF17	83	34.305	ENSSLDG00000019577	rnf17	76	34.258	Seriola_lalandi_dorsalis
ENSCHIG00000026716	RNF17	98	73.829	ENSSARG00000003016	RNF17	84	73.829	Sorex_araneus
ENSCHIG00000026716	RNF17	99	53.536	ENSSPUG00000008917	RNF17	98	53.536	Sphenodon_punctatus
ENSCHIG00000026716	RNF17	82	31.945	ENSSPAG00000001925	rnf17	90	32.121	Stegastes_partitus
ENSCHIG00000026716	RNF17	100	83.581	ENSSSCG00000009572	RNF17	100	83.408	Sus_scrofa
ENSCHIG00000026716	RNF17	79	55.975	ENSTGUG00000011267	-	100	54.493	Taeniopygia_guttata
ENSCHIG00000026716	RNF17	63	50.831	ENSTGUG00000011272	-	100	53.394	Taeniopygia_guttata
ENSCHIG00000026716	RNF17	98	33.934	ENSTRUG00000015498	rnf17	77	33.360	Takifugu_rubripes
ENSCHIG00000026716	RNF17	98	33.687	ENSTNIG00000015681	rnf17	100	32.921	Tetraodon_nigroviridis
ENSCHIG00000026716	RNF17	100	81.157	ENSTBEG00000000282	RNF17	93	80.893	Tupaia_belangeri
ENSCHIG00000026716	RNF17	95	82.764	ENSTTRG00000012698	RNF17	97	76.596	Tursiops_truncatus
ENSCHIG00000026716	RNF17	100	87.184	ENSUMAG00000013953	-	100	87.184	Ursus_maritimus
ENSCHIG00000026716	RNF17	82	88.732	ENSVPAG00000011388	RNF17	82	88.732	Vicugna_pacos
ENSCHIG00000026716	RNF17	100	83.771	ENSVVUG00000006226	RNF17	99	88.378	Vulpes_vulpes
ENSCHIG00000026716	RNF17	100	45.046	ENSXETG00000034020	RNF17	100	44.892	Xenopus_tropicalis
ENSCHIG00000026716	RNF17	87	35.000	ENSXCOG00000018295	rnf17	76	34.467	Xiphophorus_couchianus
ENSCHIG00000026716	RNF17	87	35.000	ENSXMAG00000014747	rnf17	77	34.646	Xiphophorus_maculatus