EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000026854 (Gene tree)
Gene ID: 102188731
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3838 bases
Position: chr25:28196408-28200245
Accession: 102188731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000033206	SBDS	PF01172.18	8.1e-33	1	1
ENSCHIP00000033206	SBDS_C	PF09377.10	3.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000041084	SBDS-201	753	XM_018040894	ENSCHIP00000033206	250 (aa)	XP_017896383	UPI00029D6993

Gene Model

Click here to download ENSCHIG00000026854's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026854	SBDS	100	99.600	ENSG00000126524	SBDS	100	99.600	Homo_sapiens
ENSCHIG00000026854	SBDS	99	83.133	ENSAPOG00000014285	sbds	100	83.133	Acanthochromis_polyacanthus
ENSCHIG00000026854	SBDS	100	98.400	ENSAMEG00000018167	SBDS	100	98.400	Ailuropoda_melanoleuca
ENSCHIG00000026854	SBDS	99	82.937	ENSACIG00000007308	sbds	100	82.937	Amphilophus_citrinellus
ENSCHIG00000026854	SBDS	99	83.133	ENSAOCG00000016770	sbds	100	83.133	Amphiprion_ocellaris
ENSCHIG00000026854	SBDS	99	83.534	ENSAPEG00000015897	sbds	100	83.534	Amphiprion_percula
ENSCHIG00000026854	SBDS	99	83.534	ENSATEG00000006901	sbds	100	83.534	Anabas_testudineus
ENSCHIG00000026854	SBDS	92	92.208	ENSANAG00000024342	-	97	92.208	Aotus_nancymaae
ENSCHIG00000026854	SBDS	83	99.034	ENSANAG00000037501	-	100	99.034	Aotus_nancymaae
ENSCHIG00000026854	SBDS	99	84.337	ENSACLG00000018750	sbds	100	84.337	Astatotilapia_calliptera
ENSCHIG00000026854	SBDS	100	84.400	ENSAMXG00000005361	sbds	100	84.400	Astyanax_mexicanus
ENSCHIG00000026854	SBDS	100	99.200	ENSBTAG00000004051	SBDS	100	99.200	Bos_taurus
ENSCHIG00000026854	SBDS	98	57.317	WBGene00021063	sbds-1	97	57.317	Caenorhabditis_elegans
ENSCHIG00000026854	SBDS	100	98.400	ENSCJAG00000041007	SBDS	100	98.400	Callithrix_jacchus
ENSCHIG00000026854	SBDS	100	96.429	ENSCAFG00000010797	SBDS	100	96.429	Canis_familiaris
ENSCHIG00000026854	SBDS	100	98.800	ENSCAFG00020005357	SBDS	100	98.800	Canis_lupus_dingo
ENSCHIG00000026854	SBDS	100	99.600	ENSTSYG00000033822	SBDS	100	99.600	Carlito_syrichta
ENSCHIG00000026854	SBDS	66	98.171	ENSCAPG00000006634	SBDS	100	98.171	Cavia_aperea
ENSCHIG00000026854	SBDS	100	98.800	ENSCPOG00000036143	SBDS	100	98.800	Cavia_porcellus
ENSCHIG00000026854	SBDS	100	99.200	ENSCCAG00000020671	SBDS	100	99.200	Cebus_capucinus
ENSCHIG00000026854	SBDS	100	99.600	ENSCATG00000039026	SBDS	100	99.600	Cercocebus_atys
ENSCHIG00000026854	SBDS	99	71.371	ENSCLAG00000002113	-	99	71.371	Chinchilla_lanigera
ENSCHIG00000026854	SBDS	100	98.400	ENSCLAG00000005721	-	100	98.400	Chinchilla_lanigera
ENSCHIG00000026854	SBDS	100	99.600	ENSCSAG00000018275	SBDS	100	99.600	Chlorocebus_sabaeus
ENSCHIG00000026854	SBDS	100	94.400	ENSCHOG00000003795	SBDS	100	94.400	Choloepus_hoffmanni
ENSCHIG00000026854	SBDS	100	90.000	ENSCPBG00000014893	SBDS	100	90.000	Chrysemys_picta_bellii
ENSCHIG00000026854	SBDS	99	67.200	ENSCSAVG00000011811	-	100	67.200	Ciona_savignyi
ENSCHIG00000026854	SBDS	100	99.200	ENSCANG00000032368	SBDS	100	99.200	Colobus_angolensis_palliatus
ENSCHIG00000026854	SBDS	66	95.732	ENSCGRG00001019886	Sbds	100	95.732	Cricetulus_griseus_chok1gshd
ENSCHIG00000026854	SBDS	83	96.618	ENSCGRG00000009211	Sbds	100	96.618	Cricetulus_griseus_crigri
ENSCHIG00000026854	SBDS	99	81.526	ENSCSEG00000005798	sbds	100	81.526	Cynoglossus_semilaevis
ENSCHIG00000026854	SBDS	99	81.928	ENSCVAG00000001053	sbds	100	81.928	Cyprinodon_variegatus
ENSCHIG00000026854	SBDS	100	84.000	ENSDARG00000027803	sbds	100	84.000	Danio_rerio
ENSCHIG00000026854	SBDS	100	98.400	ENSDNOG00000041174	SBDS	100	98.400	Dasypus_novemcinctus
ENSCHIG00000026854	SBDS	100	96.400	ENSDORG00000026218	Sbds	100	96.400	Dipodomys_ordii
ENSCHIG00000026854	SBDS	90	58.772	FBgn0035714	CG8549	99	59.036	Drosophila_melanogaster
ENSCHIG00000026854	SBDS	93	58.369	ENSEBUG00000015780	sbds	100	58.369	Eptatretus_burgeri
ENSCHIG00000026854	SBDS	100	99.200	ENSEASG00005008821	SBDS	100	99.200	Equus_asinus_asinus
ENSCHIG00000026854	SBDS	100	99.200	ENSECAG00000008202	SBDS	100	99.200	Equus_caballus
ENSCHIG00000026854	SBDS	83	76.442	ENSEEUG00000004768	SBDS	100	76.442	Erinaceus_europaeus
ENSCHIG00000026854	SBDS	100	82.400	ENSELUG00000008382	sbds	100	82.400	Esox_lucius
ENSCHIG00000026854	SBDS	100	98.800	ENSFCAG00000022142	SBDS	100	98.800	Felis_catus
ENSCHIG00000026854	SBDS	100	89.600	ENSFALG00000013808	SBDS	100	89.600	Ficedula_albicollis
ENSCHIG00000026854	SBDS	100	98.800	ENSFDAG00000018947	-	100	98.800	Fukomys_damarensis
ENSCHIG00000026854	SBDS	99	78.715	ENSFHEG00000000708	sbds	100	78.715	Fundulus_heteroclitus
ENSCHIG00000026854	SBDS	100	84.000	ENSGMOG00000018356	sbds	99	84.000	Gadus_morhua
ENSCHIG00000026854	SBDS	100	89.600	ENSGALG00000027989	SBDS	100	89.600	Gallus_gallus
ENSCHIG00000026854	SBDS	92	78.696	ENSGAFG00000014204	sbds	100	78.696	Gambusia_affinis
ENSCHIG00000026854	SBDS	99	82.329	ENSGACG00000012697	sbds	100	82.329	Gasterosteus_aculeatus
ENSCHIG00000026854	SBDS	86	90.187	ENSGAGG00000022402	SBDS	100	90.187	Gopherus_agassizii
ENSCHIG00000026854	SBDS	96	79.253	ENSGGOG00000040023	-	92	79.253	Gorilla_gorilla
ENSCHIG00000026854	SBDS	99	84.337	ENSHBUG00000002660	sbds	100	84.337	Haplochromis_burtoni
ENSCHIG00000026854	SBDS	100	97.200	ENSHGLG00000009671	SBDS	100	97.200	Heterocephalus_glaber_female
ENSCHIG00000026854	SBDS	100	97.200	ENSHGLG00100011332	SBDS	100	97.200	Heterocephalus_glaber_male
ENSCHIG00000026854	SBDS	99	81.526	ENSHCOG00000018606	sbds	100	81.526	Hippocampus_comes
ENSCHIG00000026854	SBDS	100	85.200	ENSIPUG00000006536	sbds	100	85.200	Ictalurus_punctatus
ENSCHIG00000026854	SBDS	100	70.356	ENSJJAG00000003934	-	100	70.356	Jaculus_jaculus
ENSCHIG00000026854	SBDS	100	94.800	ENSJJAG00000012033	-	100	94.800	Jaculus_jaculus
ENSCHIG00000026854	SBDS	99	83.534	ENSKMAG00000018542	sbds	100	83.534	Kryptolebias_marmoratus
ENSCHIG00000026854	SBDS	99	80.723	ENSLBEG00000016687	sbds	100	80.723	Labrus_bergylta
ENSCHIG00000026854	SBDS	100	70.472	ENSLACG00000018916	SBDS	100	70.472	Latimeria_chalumnae
ENSCHIG00000026854	SBDS	100	87.600	ENSLOCG00000004073	sbds	100	87.600	Lepisosteus_oculatus
ENSCHIG00000026854	SBDS	100	97.600	ENSLAFG00000008763	SBDS	100	97.600	Loxodonta_africana
ENSCHIG00000026854	SBDS	100	99.600	ENSMFAG00000032620	SBDS	100	99.600	Macaca_fascicularis
ENSCHIG00000026854	SBDS	100	99.600	ENSMMUG00000045653	SBDS	100	99.600	Macaca_mulatta
ENSCHIG00000026854	SBDS	100	99.600	ENSMNEG00000031523	SBDS	100	99.600	Macaca_nemestrina
ENSCHIG00000026854	SBDS	100	74.803	ENSMLEG00000036826	SBDS	100	74.803	Mandrillus_leucophaeus
ENSCHIG00000026854	SBDS	99	83.133	ENSMAMG00000016062	sbds	100	83.133	Mastacembelus_armatus
ENSCHIG00000026854	SBDS	99	84.337	ENSMZEG00005024385	sbds	100	84.337	Maylandia_zebra
ENSCHIG00000026854	SBDS	100	89.600	ENSMGAG00000002119	SBDS	100	89.600	Meleagris_gallopavo
ENSCHIG00000026854	SBDS	99	77.108	ENSMAUG00000022214	-	100	77.108	Mesocricetus_auratus
ENSCHIG00000026854	SBDS	100	99.600	ENSMICG00000014366	SBDS	100	99.600	Microcebus_murinus
ENSCHIG00000026854	SBDS	100	98.000	ENSMOCG00000011739	Sbds	100	98.000	Microtus_ochrogaster
ENSCHIG00000026854	SBDS	99	73.600	ENSMMOG00000005061	sbds	100	73.200	Mola_mola
ENSCHIG00000026854	SBDS	100	97.200	ENSMODG00000006644	SBDS	100	97.200	Monodelphis_domestica
ENSCHIG00000026854	SBDS	99	83.133	ENSMALG00000010219	sbds	100	83.133	Monopterus_albus
ENSCHIG00000026854	SBDS	100	98.000	MGP_CAROLIEiJ_G0027800	Sbds	100	98.000	Mus_caroli
ENSCHIG00000026854	SBDS	100	97.600	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSCHIG00000026854	SBDS	100	97.600	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSCHIG00000026854	SBDS	100	97.600	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSCHIG00000026854	SBDS	67	93.452	ENSMPUG00000016192	SBDS	97	93.452	Mustela_putorius_furo
ENSCHIG00000026854	SBDS	73	96.703	ENSMLUG00000013575	SBDS	100	96.703	Myotis_lucifugus
ENSCHIG00000026854	SBDS	100	98.000	ENSNGAG00000012093	Sbds	100	98.000	Nannospalax_galili
ENSCHIG00000026854	SBDS	99	84.337	ENSNBRG00000017027	sbds	100	84.337	Neolamprologus_brichardi
ENSCHIG00000026854	SBDS	100	99.600	ENSNLEG00000013288	SBDS	100	99.600	Nomascus_leucogenys
ENSCHIG00000026854	SBDS	100	95.600	ENSOPRG00000008721	SBDS	100	95.600	Ochotona_princeps
ENSCHIG00000026854	SBDS	100	88.400	ENSODEG00000019253	-	84	88.400	Octodon_degus
ENSCHIG00000026854	SBDS	99	72.691	ENSODEG00000000137	-	85	76.000	Octodon_degus
ENSCHIG00000026854	SBDS	99	77.510	ENSODEG00000001116	-	99	77.510	Octodon_degus
ENSCHIG00000026854	SBDS	99	83.534	ENSONIG00000005874	sbds	100	83.534	Oreochromis_niloticus
ENSCHIG00000026854	SBDS	83	92.754	ENSOANG00000007674	-	100	92.754	Ornithorhynchus_anatinus
ENSCHIG00000026854	SBDS	100	97.200	ENSOCUG00000003170	SBDS	100	97.200	Oryctolagus_cuniculus
ENSCHIG00000026854	SBDS	99	80.723	ENSORLG00000023489	sbds	100	80.723	Oryzias_latipes
ENSCHIG00000026854	SBDS	99	80.321	ENSORLG00020019282	sbds	100	80.321	Oryzias_latipes_hni
ENSCHIG00000026854	SBDS	99	80.321	ENSORLG00015008005	sbds	100	80.321	Oryzias_latipes_hsok
ENSCHIG00000026854	SBDS	99	81.124	ENSOMEG00000022747	sbds	100	81.124	Oryzias_melastigma
ENSCHIG00000026854	SBDS	100	98.800	ENSOGAG00000009011	-	100	98.800	Otolemur_garnettii
ENSCHIG00000026854	SBDS	100	82.400	ENSOGAG00000015036	-	100	82.400	Otolemur_garnettii
ENSCHIG00000026854	SBDS	100	100.000	ENSOARG00000010609	SBDS	100	100.000	Ovis_aries
ENSCHIG00000026854	SBDS	100	98.800	ENSPPAG00000043889	-	100	98.800	Pan_paniscus
ENSCHIG00000026854	SBDS	100	98.800	ENSPPRG00000002307	SBDS	100	98.800	Panthera_pardus
ENSCHIG00000026854	SBDS	100	98.800	ENSPTIG00000021308	SBDS	100	98.800	Panthera_tigris_altaica
ENSCHIG00000026854	SBDS	100	84.400	ENSPTRG00000047744	-	100	84.400	Pan_troglodytes
ENSCHIG00000026854	SBDS	100	99.600	ENSPTRG00000019254	SBDS	100	99.600	Pan_troglodytes
ENSCHIG00000026854	SBDS	100	84.800	ENSPTRG00000050835	-	100	84.800	Pan_troglodytes
ENSCHIG00000026854	SBDS	87	96.774	ENSPTRG00000048174	-	96	96.774	Pan_troglodytes
ENSCHIG00000026854	SBDS	100	99.200	ENSPANG00000004078	SBDS	100	99.200	Papio_anubis
ENSCHIG00000026854	SBDS	100	84.400	ENSPKIG00000006489	sbds	100	84.400	Paramormyrops_kingsleyae
ENSCHIG00000026854	SBDS	83	90.821	ENSPSIG00000014603	SBDS	99	90.821	Pelodiscus_sinensis
ENSCHIG00000026854	SBDS	99	81.928	ENSPMGG00000004246	sbds	100	81.928	Periophthalmus_magnuspinnatus
ENSCHIG00000026854	SBDS	100	97.600	ENSPEMG00000008728	Sbds	100	97.600	Peromyscus_maniculatus_bairdii
ENSCHIG00000026854	SBDS	100	95.600	ENSPCIG00000029718	SBDS	100	95.600	Phascolarctos_cinereus
ENSCHIG00000026854	SBDS	99	81.124	ENSPFOG00000015837	sbds	100	81.124	Poecilia_formosa
ENSCHIG00000026854	SBDS	99	81.124	ENSPLAG00000003641	sbds	100	81.124	Poecilia_latipinna
ENSCHIG00000026854	SBDS	99	81.124	ENSPMEG00000019483	sbds	100	81.124	Poecilia_mexicana
ENSCHIG00000026854	SBDS	99	80.723	ENSPREG00000018758	sbds	100	80.723	Poecilia_reticulata
ENSCHIG00000026854	SBDS	100	99.600	ENSPPYG00000017513	SBDS	100	99.600	Pongo_abelii
ENSCHIG00000026854	SBDS	100	99.200	ENSPCOG00000021098	SBDS	100	99.200	Propithecus_coquereli
ENSCHIG00000026854	SBDS	100	98.800	ENSPVAG00000009369	SBDS	100	98.800	Pteropus_vampyrus
ENSCHIG00000026854	SBDS	99	83.936	ENSPNYG00000022403	sbds	100	83.936	Pundamilia_nyererei
ENSCHIG00000026854	SBDS	100	85.200	ENSPNAG00000001120	sbds	100	85.200	Pygocentrus_nattereri
ENSCHIG00000026854	SBDS	100	97.600	ENSRNOG00000000888	Sbds	100	97.600	Rattus_norvegicus
ENSCHIG00000026854	SBDS	100	99.600	ENSRBIG00000035557	SBDS	100	99.600	Rhinopithecus_bieti
ENSCHIG00000026854	SBDS	100	81.200	ENSRROG00000041986	-	100	79.200	Rhinopithecus_roxellana
ENSCHIG00000026854	SBDS	100	99.600	ENSRROG00000040842	-	100	99.600	Rhinopithecus_roxellana
ENSCHIG00000026854	SBDS	96	44.082	YLR022C	-	96	43.320	Saccharomyces_cerevisiae
ENSCHIG00000026854	SBDS	93	98.707	ENSSBOG00000022460	SBDS	100	98.707	Saimiri_boliviensis_boliviensis
ENSCHIG00000026854	SBDS	100	83.600	ENSSHAG00000010263	SBDS	100	83.600	Sarcophilus_harrisii
ENSCHIG00000026854	SBDS	100	85.600	ENSSFOG00015001108	sbds	100	85.600	Scleropages_formosus
ENSCHIG00000026854	SBDS	99	83.936	ENSSMAG00000020506	sbds	100	83.936	Scophthalmus_maximus
ENSCHIG00000026854	SBDS	99	82.731	ENSSDUG00000001528	sbds	100	82.731	Seriola_dumerili
ENSCHIG00000026854	SBDS	99	83.133	ENSSLDG00000003659	sbds	100	83.133	Seriola_lalandi_dorsalis
ENSCHIG00000026854	SBDS	61	98.039	ENSSARG00000013132	-	100	98.039	Sorex_araneus
ENSCHIG00000026854	SBDS	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSCHIG00000026854	SBDS	100	87.200	ENSSPUG00000002699	SBDS	100	87.200	Sphenodon_punctatus
ENSCHIG00000026854	SBDS	99	83.133	ENSSPAG00000016419	sbds	100	75.600	Stegastes_partitus
ENSCHIG00000026854	SBDS	100	99.600	ENSSSCG00000007732	SBDS	100	99.600	Sus_scrofa
ENSCHIG00000026854	SBDS	66	89.697	ENSTGUG00000003426	SBDS	99	89.697	Taeniopygia_guttata
ENSCHIG00000026854	SBDS	99	83.133	ENSTRUG00000021443	sbds	100	83.133	Takifugu_rubripes
ENSCHIG00000026854	SBDS	99	81.928	ENSTNIG00000019000	sbds	100	81.928	Tetraodon_nigroviridis
ENSCHIG00000026854	SBDS	83	84.135	ENSTBEG00000001178	SBDS	100	84.135	Tupaia_belangeri
ENSCHIG00000026854	SBDS	100	79.200	ENSTTRG00000003921	SBDS	100	79.200	Tursiops_truncatus
ENSCHIG00000026854	SBDS	100	98.400	ENSUAMG00000001326	SBDS	100	98.400	Ursus_americanus
ENSCHIG00000026854	SBDS	100	98.400	ENSUMAG00000015353	SBDS	100	98.400	Ursus_maritimus
ENSCHIG00000026854	SBDS	100	98.800	ENSVVUG00000016478	SBDS	100	98.800	Vulpes_vulpes
ENSCHIG00000026854	SBDS	100	86.400	ENSXETG00000010093	sbds	100	86.400	Xenopus_tropicalis
ENSCHIG00000026854	SBDS	99	73.896	ENSXCOG00000010639	sbds	100	73.896	Xiphophorus_couchianus
ENSCHIG00000026854	SBDS	99	81.526	ENSXMAG00000006065	sbds	100	81.526	Xiphophorus_maculatus