EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000026872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 528 bases
Position: chr13:4395335-4395862
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000033230	MRP-L28	PF09812.9	7.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000041108	-	504	-	ENSCHIP00000033230	167 (aa)	-	UPI000D195E60

Gene Model

Click here to download ENSCHIG00000026872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000026872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000026872	-	92	86.538	ENSCHIG00000000131	-	77	86.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000026872	-	100	66.471	ENSG00000185608	MRPL40	77	68.987	Homo_sapiens
ENSCHIG00000026872	-	66	52.252	ENSAPOG00000021291	mrpl40	67	51.095	Acanthochromis_polyacanthus
ENSCHIG00000026872	-	100	69.412	ENSAMEG00000011421	MRPL40	77	69.620	Ailuropoda_melanoleuca
ENSCHIG00000026872	-	66	54.955	ENSACIG00000006672	mrpl40	68	52.555	Amphilophus_citrinellus
ENSCHIG00000026872	-	66	50.450	ENSAOCG00000003216	mrpl40	67	49.635	Amphiprion_ocellaris
ENSCHIG00000026872	-	66	49.550	ENSAPEG00000017401	mrpl40	67	48.905	Amphiprion_percula
ENSCHIG00000026872	-	72	52.419	ENSATEG00000020753	mrpl40	81	51.079	Anabas_testudineus
ENSCHIG00000026872	-	100	45.614	ENSAPLG00000004002	MRPL40	77	49.351	Anas_platyrhynchos
ENSCHIG00000026872	-	85	51.724	ENSACAG00000001053	MRPL40	72	51.724	Anolis_carolinensis
ENSCHIG00000026872	-	100	67.059	ENSANAG00000026579	MRPL40	77	70.253	Aotus_nancymaae
ENSCHIG00000026872	-	66	51.351	ENSACLG00000011106	mrpl40	67	50.365	Astatotilapia_calliptera
ENSCHIG00000026872	-	73	50.820	ENSAMXG00000029691	mrpl40	71	48.630	Astyanax_mexicanus
ENSCHIG00000026872	-	93	87.975	ENSBTAG00000019891	MRPL40	77	87.975	Bos_taurus
ENSCHIG00000026872	-	100	66.082	ENSCJAG00000001584	MRPL40	76	68.987	Callithrix_jacchus
ENSCHIG00000026872	-	100	71.176	ENSCAFG00020007995	MRPL40	77	70.886	Canis_lupus_dingo
ENSCHIG00000026872	-	100	69.412	ENSTSYG00000014747	MRPL40	77	70.253	Carlito_syrichta
ENSCHIG00000026872	-	63	68.519	ENSCAPG00000012876	MRPL40	76	68.519	Cavia_aperea
ENSCHIG00000026872	-	100	66.471	ENSCPOG00000026802	MRPL40	77	67.722	Cavia_porcellus
ENSCHIG00000026872	-	100	65.882	ENSCCAG00000037694	MRPL40	79	68.987	Cebus_capucinus
ENSCHIG00000026872	-	100	67.059	ENSCATG00000031418	-	77	70.253	Cercocebus_atys
ENSCHIG00000026872	-	93	70.440	ENSCATG00000043592	-	78	70.886	Cercocebus_atys
ENSCHIG00000026872	-	91	67.742	ENSCLAG00000016629	MRPL40	77	67.722	Chinchilla_lanigera
ENSCHIG00000026872	-	100	67.059	ENSCSAG00000011593	MRPL40	77	70.253	Chlorocebus_sabaeus
ENSCHIG00000026872	-	83	71.127	ENSCHOG00000008751	MRPL40	80	71.127	Choloepus_hoffmanni
ENSCHIG00000026872	-	84	53.846	ENSCPBG00000010618	MRPL40	74	54.545	Chrysemys_picta_bellii
ENSCHIG00000026872	-	89	71.053	ENSCANG00000038600	MRPL40	81	71.053	Colobus_angolensis_palliatus
ENSCHIG00000026872	-	100	61.765	ENSCGRG00001019957	Mrpl40	77	63.291	Cricetulus_griseus_chok1gshd
ENSCHIG00000026872	-	100	61.765	ENSCGRG00000001245	Mrpl40	77	63.291	Cricetulus_griseus_crigri
ENSCHIG00000026872	-	70	35.043	ENSCSEG00000012296	-	61	36.607	Cynoglossus_semilaevis
ENSCHIG00000026872	-	74	50.794	ENSCSEG00000019750	mrpl40	61	53.175	Cynoglossus_semilaevis
ENSCHIG00000026872	-	92	46.707	ENSCVAG00000018229	mrpl40	82	46.707	Cyprinodon_variegatus
ENSCHIG00000026872	-	71	47.899	ENSDARG00000043554	mrpl40	60	47.899	Danio_rerio
ENSCHIG00000026872	-	100	60.000	ENSDNOG00000038360	-	76	60.127	Dasypus_novemcinctus
ENSCHIG00000026872	-	100	68.824	ENSDORG00000002949	Mrpl40	77	69.620	Dipodomys_ordii
ENSCHIG00000026872	-	74	37.121	FBgn0037892	mRpL40	67	37.121	Drosophila_melanogaster
ENSCHIG00000026872	-	89	37.748	ENSETEG00000006816	-	80	37.748	Echinops_telfairi
ENSCHIG00000026872	-	99	75.000	ENSEASG00005010493	MRPL40	77	75.316	Equus_asinus_asinus
ENSCHIG00000026872	-	74	76.190	ENSECAG00000009876	MRPL40	75	76.190	Equus_caballus
ENSCHIG00000026872	-	100	67.647	ENSEEUG00000009268	MRPL40	76	68.354	Erinaceus_europaeus
ENSCHIG00000026872	-	80	51.095	ENSELUG00000009281	mrpl40	67	51.095	Esox_lucius
ENSCHIG00000026872	-	100	71.765	ENSFCAG00000002752	MRPL40	77	72.785	Felis_catus
ENSCHIG00000026872	-	84	48.951	ENSFALG00000007981	MRPL40	72	51.049	Ficedula_albicollis
ENSCHIG00000026872	-	74	68.254	ENSFDAG00000020940	MRPL40	78	68.254	Fukomys_damarensis
ENSCHIG00000026872	-	74	51.181	ENSGAFG00000000522	mrpl40	62	51.181	Gambusia_affinis
ENSCHIG00000026872	-	84	52.448	ENSGAGG00000020728	MRPL40	69	54.545	Gopherus_agassizii
ENSCHIG00000026872	-	100	66.471	ENSGGOG00000012336	MRPL40	77	68.987	Gorilla_gorilla
ENSCHIG00000026872	-	66	51.351	ENSHBUG00000000404	mrpl40	67	50.365	Haplochromis_burtoni
ENSCHIG00000026872	-	74	68.254	ENSHGLG00000018525	MRPL40	78	68.254	Heterocephalus_glaber_female
ENSCHIG00000026872	-	100	65.294	ENSHGLG00100009563	MRPL40	77	65.823	Heterocephalus_glaber_male
ENSCHIG00000026872	-	80	46.715	ENSHCOG00000005731	mrpl40	67	46.715	Hippocampus_comes
ENSCHIG00000026872	-	92	49.068	ENSIPUG00000020288	Mrpl40	76	49.068	Ictalurus_punctatus
ENSCHIG00000026872	-	100	65.294	ENSSTOG00000002887	MRPL40	76	67.089	Ictidomys_tridecemlineatus
ENSCHIG00000026872	-	100	64.706	ENSJJAG00000017905	Mrpl40	77	65.190	Jaculus_jaculus
ENSCHIG00000026872	-	79	52.593	ENSKMAG00000003717	mrpl40	66	54.815	Kryptolebias_marmoratus
ENSCHIG00000026872	-	83	46.479	ENSLBEG00000025203	mrpl40	76	49.296	Labrus_bergylta
ENSCHIG00000026872	-	84	50.345	ENSLACG00000015070	MRPL40	71	50.345	Latimeria_chalumnae
ENSCHIG00000026872	-	75	54.762	ENSLOCG00000001879	mrpl40	74	52.632	Lepisosteus_oculatus
ENSCHIG00000026872	-	100	73.529	ENSLAFG00000011061	MRPL40	77	73.418	Loxodonta_africana
ENSCHIG00000026872	-	93	69.811	ENSMFAG00000001495	-	78	70.253	Macaca_fascicularis
ENSCHIG00000026872	-	80	72.263	ENSMFAG00000039890	-	73	72.263	Macaca_fascicularis
ENSCHIG00000026872	-	100	67.059	ENSMFAG00000032018	-	77	70.253	Macaca_fascicularis
ENSCHIG00000026872	-	80	70.803	ENSMMUG00000006218	-	76	70.803	Macaca_mulatta
ENSCHIG00000026872	-	93	69.811	ENSMMUG00000030886	-	77	70.253	Macaca_mulatta
ENSCHIG00000026872	-	99	64.881	ENSMNEG00000041171	-	78	69.620	Macaca_nemestrina
ENSCHIG00000026872	-	100	66.471	ENSMNEG00000034050	-	77	69.620	Macaca_nemestrina
ENSCHIG00000026872	-	100	54.118	ENSMNEG00000040492	-	74	56.329	Macaca_nemestrina
ENSCHIG00000026872	-	80	70.073	ENSMLEG00000009022	-	73	70.073	Mandrillus_leucophaeus
ENSCHIG00000026872	-	89	69.737	ENSMLEG00000030926	-	81	69.737	Mandrillus_leucophaeus
ENSCHIG00000026872	-	93	70.440	ENSMLEG00000032552	-	78	70.886	Mandrillus_leucophaeus
ENSCHIG00000026872	-	80	48.175	ENSMAMG00000014249	mrpl40	67	51.095	Mastacembelus_armatus
ENSCHIG00000026872	-	66	51.351	ENSMZEG00005009853	mrpl40	67	50.365	Maylandia_zebra
ENSCHIG00000026872	-	67	53.043	ENSMGAG00000001177	MRPL40	80	54.400	Meleagris_gallopavo
ENSCHIG00000026872	-	100	63.529	ENSMAUG00000015350	Mrpl40	77	65.190	Mesocricetus_auratus
ENSCHIG00000026872	-	100	72.353	ENSMICG00000046066	MRPL40	77	73.418	Microcebus_murinus
ENSCHIG00000026872	-	100	63.529	ENSMOCG00000016970	Mrpl40	77	63.924	Microtus_ochrogaster
ENSCHIG00000026872	-	72	51.613	ENSMMOG00000012861	mrpl40	67	54.839	Mola_mola
ENSCHIG00000026872	-	80	60.145	ENSMODG00000010070	MRPL40	75	60.145	Monodelphis_domestica
ENSCHIG00000026872	-	80	45.255	ENSMALG00000020778	mrpl40	70	48.148	Monopterus_albus
ENSCHIG00000026872	-	100	64.118	MGP_CAROLIEiJ_G0020557	Mrpl40	78	70.635	Mus_caroli
ENSCHIG00000026872	-	100	62.941	ENSMUSG00000022706	Mrpl40	78	69.841	Mus_musculus
ENSCHIG00000026872	-	100	64.706	MGP_PahariEiJ_G0016262	Mrpl40	78	70.635	Mus_pahari
ENSCHIG00000026872	-	100	63.529	MGP_SPRETEiJ_G0021452	Mrpl40	78	69.841	Mus_spretus
ENSCHIG00000026872	-	100	70.588	ENSMPUG00000003865	MRPL40	77	70.886	Mustela_putorius_furo
ENSCHIG00000026872	-	100	69.412	ENSMLUG00000002456	-	77	69.620	Myotis_lucifugus
ENSCHIG00000026872	-	100	69.412	ENSMLUG00000024620	-	77	69.620	Myotis_lucifugus
ENSCHIG00000026872	-	88	64.000	ENSNGAG00000000304	Mrpl40	74	64.000	Nannospalax_galili
ENSCHIG00000026872	-	100	63.529	ENSNLEG00000005372	MRPL40	77	65.823	Nomascus_leucogenys
ENSCHIG00000026872	-	65	45.946	ENSMEUG00000003868	-	67	45.946	Notamacropus_eugenii
ENSCHIG00000026872	-	100	40.588	ENSOPRG00000002606	MRPL40	77	39.241	Ochotona_princeps
ENSCHIG00000026872	-	100	68.824	ENSODEG00000017051	MRPL40	77	68.987	Octodon_degus
ENSCHIG00000026872	-	66	50.450	ENSONIG00000014393	mrpl40	67	49.635	Oreochromis_niloticus
ENSCHIG00000026872	-	90	70.130	ENSOCUG00000009859	MRPL40	55	70.130	Oryctolagus_cuniculus
ENSCHIG00000026872	-	74	52.756	ENSORLG00000002574	mrpl40	68	55.556	Oryzias_latipes
ENSCHIG00000026872	-	100	43.678	ENSORLG00020005727	mrpl40	62	55.906	Oryzias_latipes_hni
ENSCHIG00000026872	-	100	44.828	ENSORLG00015015422	mrpl40	62	54.331	Oryzias_latipes_hsok
ENSCHIG00000026872	-	74	52.756	ENSOMEG00000017632	mrpl40	62	55.906	Oryzias_melastigma
ENSCHIG00000026872	-	89	70.395	ENSOGAG00000030071	MRPL40	81	70.395	Otolemur_garnettii
ENSCHIG00000026872	-	96	80.000	ENSOARG00000017561	MRPL40	76	82.278	Ovis_aries
ENSCHIG00000026872	-	100	66.471	ENSPPAG00000030349	MRPL40	77	68.987	Pan_paniscus
ENSCHIG00000026872	-	91	72.903	ENSPPRG00000004672	MRPL40	77	72.785	Panthera_pardus
ENSCHIG00000026872	-	89	73.684	ENSPTIG00000003393	MRPL40	74	73.684	Panthera_tigris_altaica
ENSCHIG00000026872	-	100	66.471	ENSPTRG00000014061	MRPL40	77	68.987	Pan_troglodytes
ENSCHIG00000026872	-	93	70.440	ENSPANG00000000595	-	78	70.886	Papio_anubis
ENSCHIG00000026872	-	100	67.059	ENSPANG00000007370	-	77	70.253	Papio_anubis
ENSCHIG00000026872	-	91	49.032	ENSPKIG00000024494	mrpl40	76	49.032	Paramormyrops_kingsleyae
ENSCHIG00000026872	-	79	54.815	ENSPSIG00000003055	MRPL40	81	54.815	Pelodiscus_sinensis
ENSCHIG00000026872	-	79	51.852	ENSPMGG00000018388	mrpl40	70	51.852	Periophthalmus_magnuspinnatus
ENSCHIG00000026872	-	100	64.706	ENSPEMG00000017933	Mrpl40	77	65.823	Peromyscus_maniculatus_bairdii
ENSCHIG00000026872	-	74	62.992	ENSPCIG00000025479	MRPL40	62	62.992	Phascolarctos_cinereus
ENSCHIG00000026872	-	74	52.308	ENSPFOG00000012506	mrpl40	61	52.308	Poecilia_formosa
ENSCHIG00000026872	-	74	53.543	ENSPLAG00000017335	mrpl40	62	53.543	Poecilia_latipinna
ENSCHIG00000026872	-	74	54.331	ENSPMEG00000003881	mrpl40	70	50.694	Poecilia_mexicana
ENSCHIG00000026872	-	74	53.543	ENSPREG00000011448	mrpl40	62	53.543	Poecilia_reticulata
ENSCHIG00000026872	-	89	68.421	ENSPPYG00000011578	MRPL40	81	68.421	Pongo_abelii
ENSCHIG00000026872	-	100	54.706	ENSPCAG00000007834	MRPL40	77	54.430	Procavia_capensis
ENSCHIG00000026872	-	100	72.941	ENSPCOG00000014413	MRPL40	77	73.418	Propithecus_coquereli
ENSCHIG00000026872	-	66	51.351	ENSPNYG00000008216	mrpl40	67	50.365	Pundamilia_nyererei
ENSCHIG00000026872	-	80	49.635	ENSPNAG00000000310	mrpl40	79	51.613	Pygocentrus_nattereri
ENSCHIG00000026872	-	100	64.118	ENSRNOG00000049686	Mrpl40	77	64.557	Rattus_norvegicus
ENSCHIG00000026872	-	100	68.235	ENSRBIG00000023060	MRPL40	77	70.886	Rhinopithecus_bieti
ENSCHIG00000026872	-	100	68.235	ENSRROG00000043837	MRPL40	77	70.886	Rhinopithecus_roxellana
ENSCHIG00000026872	-	100	65.882	ENSSBOG00000031050	MRPL40	77	68.987	Saimiri_boliviensis_boliviensis
ENSCHIG00000026872	-	74	63.780	ENSSHAG00000010239	MRPL40	79	63.780	Sarcophilus_harrisii
ENSCHIG00000026872	-	80	52.206	ENSSFOG00015014220	mrpl40	69	54.412	Scleropages_formosus
ENSCHIG00000026872	-	80	48.175	ENSSMAG00000006340	mrpl40	67	48.175	Scophthalmus_maximus
ENSCHIG00000026872	-	80	49.635	ENSSDUG00000022994	mrpl40	67	49.635	Seriola_dumerili
ENSCHIG00000026872	-	80	49.635	ENSSLDG00000009671	mrpl40	67	49.635	Seriola_lalandi_dorsalis
ENSCHIG00000026872	-	100	72.353	ENSSARG00000003051	MRPL40	77	72.152	Sorex_araneus
ENSCHIG00000026872	-	86	56.849	ENSSPUG00000015559	MRPL40	73	56.849	Sphenodon_punctatus
ENSCHIG00000026872	-	80	48.905	ENSSPAG00000015481	mrpl40	67	48.905	Stegastes_partitus
ENSCHIG00000026872	-	94	78.125	ENSSSCG00000034014	MRPL40	77	78.481	Sus_scrofa
ENSCHIG00000026872	-	54	49.462	ENSTGUG00000008534	MRPL40	78	51.667	Taeniopygia_guttata
ENSCHIG00000026872	-	60	58.000	ENSTRUG00000025904	mrpl40	68	51.825	Takifugu_rubripes
ENSCHIG00000026872	-	90	81.169	ENSTTRG00000014932	MRPL40	78	81.013	Tursiops_truncatus
ENSCHIG00000026872	-	100	70.588	ENSUAMG00000007667	MRPL40	77	70.886	Ursus_americanus
ENSCHIG00000026872	-	100	70.588	ENSUMAG00000006804	MRPL40	83	70.886	Ursus_maritimus
ENSCHIG00000026872	-	84	58.865	ENSVVUG00000020719	-	66	58.865	Vulpes_vulpes
ENSCHIG00000026872	-	100	71.176	ENSVVUG00000025360	-	77	70.886	Vulpes_vulpes
ENSCHIG00000026872	-	100	47.059	ENSXETG00000018600	mrpl40	71	51.049	Xenopus_tropicalis
ENSCHIG00000026872	-	74	51.969	ENSXCOG00000002135	mrpl40	62	51.969	Xiphophorus_couchianus
ENSCHIG00000026872	-	74	51.969	ENSXMAG00000014595	mrpl40	62	51.969	Xiphophorus_maculatus