EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000027009 (Gene tree)
Gene ID: 102189284
Gene Symbol: -
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 24009 bases
Position: chr5:69699246-69723254
Accession: 102189284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000033433	RtcB	PF01139.17	7.8e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000041312	-	4418	XM_005680585	ENSCHIP00000033433	505 (aa)	XP_005680642	UPI00029D8FB6

Gene Model

Click here to download ENSCHIG00000027009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000027009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000027009	-	100	99.802	ENSG00000100220	RTCB	100	99.802	Homo_sapiens
ENSCHIG00000027009	-	100	94.851	ENSAPOG00000006040	rtcb	100	94.851	Acanthochromis_polyacanthus
ENSCHIG00000027009	-	100	99.604	ENSAMEG00000016152	RTCB	100	99.604	Ailuropoda_melanoleuca
ENSCHIG00000027009	-	100	90.495	ENSACIG00000009083	rtcb	100	90.495	Amphilophus_citrinellus
ENSCHIG00000027009	-	100	95.050	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSCHIG00000027009	-	96	89.938	ENSAPEG00000024653	rtcb	100	89.938	Amphiprion_percula
ENSCHIG00000027009	-	100	95.050	ENSAPEG00000024701	rtcb	100	95.050	Amphiprion_percula
ENSCHIG00000027009	-	100	94.653	ENSATEG00000000618	rtcb	100	94.653	Anabas_testudineus
ENSCHIG00000027009	-	100	93.834	ENSACAG00000014817	RTCB	100	93.834	Anolis_carolinensis
ENSCHIG00000027009	-	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSCHIG00000027009	-	72	97.222	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSCHIG00000027009	-	100	93.465	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSCHIG00000027009	-	100	94.653	ENSAMXG00000042320	rtcb	100	94.653	Astyanax_mexicanus
ENSCHIG00000027009	-	100	99.802	ENSBTAG00000011070	RTCB	100	99.802	Bos_taurus
ENSCHIG00000027009	-	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSCHIG00000027009	-	100	99.406	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSCHIG00000027009	-	100	99.604	ENSCAFG00000001785	RTCB	100	99.604	Canis_familiaris
ENSCHIG00000027009	-	100	95.248	ENSCAFG00000010789	-	100	95.248	Canis_familiaris
ENSCHIG00000027009	-	87	95.909	ENSCAFG00020018953	-	99	95.909	Canis_lupus_dingo
ENSCHIG00000027009	-	100	99.604	ENSCAFG00020004890	-	100	99.604	Canis_lupus_dingo
ENSCHIG00000027009	-	100	99.010	ENSTSYG00000012320	RTCB	100	99.010	Carlito_syrichta
ENSCHIG00000027009	-	94	98.952	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
ENSCHIG00000027009	-	100	99.406	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSCHIG00000027009	-	100	99.406	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSCHIG00000027009	-	100	99.208	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSCHIG00000027009	-	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSCHIG00000027009	-	100	84.950	ENSCHOG00000009123	RTCB	100	84.950	Choloepus_hoffmanni
ENSCHIG00000027009	-	100	96.634	ENSCPBG00000023184	RTCB	100	96.634	Chrysemys_picta_bellii
ENSCHIG00000027009	-	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSCHIG00000027009	-	100	82.178	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSCHIG00000027009	-	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSCHIG00000027009	-	100	99.208	ENSCGRG00001011173	Rtcb	100	99.208	Cricetulus_griseus_chok1gshd
ENSCHIG00000027009	-	93	99.363	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSCHIG00000027009	-	100	94.059	ENSCSEG00000003986	rtcb	100	94.059	Cynoglossus_semilaevis
ENSCHIG00000027009	-	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSCHIG00000027009	-	100	94.059	ENSDARG00000101047	rtcb	100	94.059	Danio_rerio
ENSCHIG00000027009	-	80	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
ENSCHIG00000027009	-	100	98.812	ENSDORG00000010855	Rtcb	100	98.812	Dipodomys_ordii
ENSCHIG00000027009	-	99	85.487	FBgn0032781	RtcB	99	85.487	Drosophila_melanogaster
ENSCHIG00000027009	-	100	92.871	ENSETEG00000001988	RTCB	100	92.871	Echinops_telfairi
ENSCHIG00000027009	-	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSCHIG00000027009	-	100	99.604	ENSEASG00005019059	RTCB	100	99.604	Equus_asinus_asinus
ENSCHIG00000027009	-	100	99.604	ENSECAG00000023998	RTCB	100	99.604	Equus_caballus
ENSCHIG00000027009	-	89	90.157	ENSEEUG00000006251	RTCB	100	90.157	Erinaceus_europaeus
ENSCHIG00000027009	-	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSCHIG00000027009	-	100	99.802	ENSFCAG00000026480	RTCB	100	99.802	Felis_catus
ENSCHIG00000027009	-	100	97.624	ENSFALG00000013334	RTCB	100	97.624	Ficedula_albicollis
ENSCHIG00000027009	-	100	99.604	ENSFDAG00000018150	RTCB	100	99.604	Fukomys_damarensis
ENSCHIG00000027009	-	100	94.653	ENSFHEG00000009595	rtcb	100	94.653	Fundulus_heteroclitus
ENSCHIG00000027009	-	100	91.881	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSCHIG00000027009	-	100	97.426	ENSGALG00000012611	RTCB	100	97.426	Gallus_gallus
ENSCHIG00000027009	-	100	95.050	ENSGAFG00000004198	rtcb	100	95.050	Gambusia_affinis
ENSCHIG00000027009	-	100	93.663	ENSGACG00000000586	rtcb	100	93.663	Gasterosteus_aculeatus
ENSCHIG00000027009	-	93	95.957	ENSGAGG00000019133	RTCB	98	95.957	Gopherus_agassizii
ENSCHIG00000027009	-	100	99.802	ENSGGOG00000011402	RTCB	100	99.802	Gorilla_gorilla
ENSCHIG00000027009	-	100	93.465	ENSHBUG00000020571	rtcb	100	93.465	Haplochromis_burtoni
ENSCHIG00000027009	-	93	70.339	ENSHGLG00000001066	-	99	70.339	Heterocephalus_glaber_female
ENSCHIG00000027009	-	100	99.604	ENSHGLG00000004492	RTCB	100	99.604	Heterocephalus_glaber_female
ENSCHIG00000027009	-	100	99.604	ENSHGLG00100008965	RTCB	100	99.604	Heterocephalus_glaber_male
ENSCHIG00000027009	-	100	91.519	ENSHCOG00000006450	rtcb	100	91.519	Hippocampus_comes
ENSCHIG00000027009	-	100	94.851	ENSIPUG00000015443	rtcb	100	94.851	Ictalurus_punctatus
ENSCHIG00000027009	-	100	99.406	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSCHIG00000027009	-	100	98.812	ENSJJAG00000010667	Rtcb	100	98.812	Jaculus_jaculus
ENSCHIG00000027009	-	100	94.653	ENSKMAG00000013178	rtcb	100	94.653	Kryptolebias_marmoratus
ENSCHIG00000027009	-	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSCHIG00000027009	-	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSCHIG00000027009	-	100	95.446	ENSLACG00000013033	RTCB	100	95.446	Latimeria_chalumnae
ENSCHIG00000027009	-	100	94.653	ENSLOCG00000016515	rtcb	99	94.653	Lepisosteus_oculatus
ENSCHIG00000027009	-	100	98.614	ENSLAFG00000002082	RTCB	100	98.614	Loxodonta_africana
ENSCHIG00000027009	-	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSCHIG00000027009	-	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSCHIG00000027009	-	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSCHIG00000027009	-	100	99.406	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSCHIG00000027009	-	100	94.653	ENSMAMG00000020676	rtcb	100	94.653	Mastacembelus_armatus
ENSCHIG00000027009	-	100	93.465	ENSMZEG00005018942	rtcb	100	93.465	Maylandia_zebra
ENSCHIG00000027009	-	100	97.041	ENSMGAG00000012805	RTCB	100	97.041	Meleagris_gallopavo
ENSCHIG00000027009	-	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSCHIG00000027009	-	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSCHIG00000027009	-	100	80.000	ENSMICG00000036677	-	100	80.000	Microcebus_murinus
ENSCHIG00000027009	-	100	99.208	ENSMOCG00000002440	Rtcb	100	99.208	Microtus_ochrogaster
ENSCHIG00000027009	-	100	94.653	ENSMMOG00000005987	rtcb	100	94.653	Mola_mola
ENSCHIG00000027009	-	100	98.416	ENSMODG00000001414	RTCB	100	98.416	Monodelphis_domestica
ENSCHIG00000027009	-	100	94.851	ENSMALG00000007603	rtcb	100	94.851	Monopterus_albus
ENSCHIG00000027009	-	100	99.208	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSCHIG00000027009	-	100	99.208	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSCHIG00000027009	-	100	99.208	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSCHIG00000027009	-	100	99.208	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSCHIG00000027009	-	100	99.604	ENSMPUG00000012285	RTCB	100	99.604	Mustela_putorius_furo
ENSCHIG00000027009	-	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSCHIG00000027009	-	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSCHIG00000027009	-	100	93.663	ENSNBRG00000017202	rtcb	100	93.663	Neolamprologus_brichardi
ENSCHIG00000027009	-	100	99.802	ENSNLEG00000004960	RTCB	100	99.802	Nomascus_leucogenys
ENSCHIG00000027009	-	100	73.069	ENSMEUG00000007809	-	100	73.069	Notamacropus_eugenii
ENSCHIG00000027009	-	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSCHIG00000027009	-	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSCHIG00000027009	-	100	65.941	ENSODEG00000005042	-	100	65.941	Octodon_degus
ENSCHIG00000027009	-	100	94.455	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
ENSCHIG00000027009	-	100	98.416	ENSOANG00000005524	RTCB	100	98.416	Ornithorhynchus_anatinus
ENSCHIG00000027009	-	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
ENSCHIG00000027009	-	100	93.861	ENSORLG00000020093	rtcb	100	93.861	Oryzias_latipes
ENSCHIG00000027009	-	100	93.861	ENSORLG00020003706	rtcb	100	93.861	Oryzias_latipes_hni
ENSCHIG00000027009	-	100	94.059	ENSORLG00015002968	rtcb	100	94.059	Oryzias_latipes_hsok
ENSCHIG00000027009	-	100	93.663	ENSOMEG00000021278	rtcb	100	93.663	Oryzias_melastigma
ENSCHIG00000027009	-	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSCHIG00000027009	-	100	100.000	ENSOARG00000018008	RTCB	100	100.000	Ovis_aries
ENSCHIG00000027009	-	100	99.802	ENSPPAG00000028667	RTCB	100	99.802	Pan_paniscus
ENSCHIG00000027009	-	100	99.802	ENSPPRG00000004038	RTCB	100	99.802	Panthera_pardus
ENSCHIG00000027009	-	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSCHIG00000027009	-	100	99.802	ENSPTRG00000014287	RTCB	100	99.802	Pan_troglodytes
ENSCHIG00000027009	-	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSCHIG00000027009	-	100	93.267	ENSPKIG00000001881	rtcb	100	93.267	Paramormyrops_kingsleyae
ENSCHIG00000027009	-	91	98.043	ENSPSIG00000011690	RTCB	100	98.043	Pelodiscus_sinensis
ENSCHIG00000027009	-	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSCHIG00000027009	-	100	99.208	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSCHIG00000027009	-	100	91.683	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSCHIG00000027009	-	100	98.812	ENSPCIG00000009467	RTCB	100	98.812	Phascolarctos_cinereus
ENSCHIG00000027009	-	100	95.446	ENSPFOG00000003058	rtcb	100	95.446	Poecilia_formosa
ENSCHIG00000027009	-	100	95.248	ENSPLAG00000017663	rtcb	100	95.248	Poecilia_latipinna
ENSCHIG00000027009	-	100	95.446	ENSPMEG00000006227	rtcb	100	95.446	Poecilia_mexicana
ENSCHIG00000027009	-	100	95.050	ENSPREG00000018467	rtcb	100	95.050	Poecilia_reticulata
ENSCHIG00000027009	-	100	99.802	ENSPPYG00000011752	RTCB	100	99.802	Pongo_abelii
ENSCHIG00000027009	-	93	81.144	ENSPCAG00000013641	RTCB	100	81.144	Procavia_capensis
ENSCHIG00000027009	-	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSCHIG00000027009	-	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSCHIG00000027009	-	100	93.465	ENSPNYG00000022760	rtcb	100	93.465	Pundamilia_nyererei
ENSCHIG00000027009	-	100	95.446	ENSPNAG00000009209	rtcb	100	95.446	Pygocentrus_nattereri
ENSCHIG00000027009	-	100	99.208	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSCHIG00000027009	-	100	90.514	ENSRBIG00000042090	RTCB	100	90.514	Rhinopithecus_bieti
ENSCHIG00000027009	-	100	94.653	ENSSBOG00000020085	-	100	94.653	Saimiri_boliviensis_boliviensis
ENSCHIG00000027009	-	94	99.578	ENSSHAG00000016277	RTCB	100	99.578	Sarcophilus_harrisii
ENSCHIG00000027009	-	100	93.069	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSCHIG00000027009	-	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSCHIG00000027009	-	100	90.891	ENSSMAG00000005096	rtcb	100	90.891	Scophthalmus_maximus
ENSCHIG00000027009	-	100	94.059	ENSSDUG00000012605	rtcb	100	94.059	Seriola_dumerili
ENSCHIG00000027009	-	100	94.059	ENSSLDG00000019458	rtcb	100	94.059	Seriola_lalandi_dorsalis
ENSCHIG00000027009	-	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSCHIG00000027009	-	100	96.238	ENSSPUG00000012814	RTCB	100	96.238	Sphenodon_punctatus
ENSCHIG00000027009	-	100	95.050	ENSSPAG00000004623	rtcb	100	95.050	Stegastes_partitus
ENSCHIG00000027009	-	100	99.802	ENSSSCG00000000158	RTCB	100	99.802	Sus_scrofa
ENSCHIG00000027009	-	100	97.624	ENSTGUG00000010947	RTCB	99	97.624	Taeniopygia_guttata
ENSCHIG00000027009	-	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSCHIG00000027009	-	100	93.267	ENSTNIG00000002484	rtcb	100	93.267	Tetraodon_nigroviridis
ENSCHIG00000027009	-	100	86.139	ENSTBEG00000004418	RTCB	100	86.139	Tupaia_belangeri
ENSCHIG00000027009	-	93	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSCHIG00000027009	-	100	99.604	ENSUAMG00000022792	RTCB	100	99.604	Ursus_americanus
ENSCHIG00000027009	-	100	99.604	ENSUMAG00000017225	RTCB	100	99.604	Ursus_maritimus
ENSCHIG00000027009	-	100	99.604	ENSVPAG00000005375	RTCB	100	99.604	Vicugna_pacos
ENSCHIG00000027009	-	100	99.604	ENSVVUG00000023408	RTCB	100	99.754	Vulpes_vulpes
ENSCHIG00000027009	-	100	94.653	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
ENSCHIG00000027009	-	100	95.050	ENSXMAG00000002855	rtcb	100	95.050	Xiphophorus_maculatus