EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000000088 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 38392 bases
Position: chrGeneScaffold_824:18297-56688
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000000075	Ago_hook	PF10427.9	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000000089	TNRC6C-201	5184	-	ENSCHOP00000000075	1727 (aa)	-	UPI0001F9DF9F

Gene Model

Click here to download ENSCHOG00000000088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000000088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000000088	TNRC6C	72	91.172	ENSG00000078687	TNRC6C	75	92.051	Homo_sapiens
ENSCHOG00000000088	TNRC6C	56	64.688	ENSAPOG00000019749	tnrc6c1	64	63.833	Acanthochromis_polyacanthus
ENSCHOG00000000088	TNRC6C	75	84.874	ENSAMEG00000013756	TNRC6C	76	84.874	Ailuropoda_melanoleuca
ENSCHOG00000000088	TNRC6C	53	65.546	ENSACIG00000008075	tnrc6c1	57	66.387	Amphilophus_citrinellus
ENSCHOG00000000088	TNRC6C	51	62.009	ENSAOCG00000023968	tnrc6c1	59	68.384	Amphiprion_ocellaris
ENSCHOG00000000088	TNRC6C	51	63.636	ENSAPEG00000009020	tnrc6c1	61	63.636	Amphiprion_percula
ENSCHOG00000000088	TNRC6C	75	85.714	ENSAPLG00000005456	TNRC6C	72	85.714	Anas_platyrhynchos
ENSCHOG00000000088	TNRC6C	75	84.802	ENSACAG00000016198	TNRC6C	69	84.036	Anolis_carolinensis
ENSCHOG00000000088	TNRC6C	72	90.851	ENSANAG00000021554	TNRC6C	75	91.733	Aotus_nancymaae
ENSCHOG00000000088	TNRC6C	65	66.387	ENSACLG00000000424	tnrc6c1	64	67.227	Astatotilapia_calliptera
ENSCHOG00000000088	TNRC6C	75	86.555	ENSBTAG00000018658	TNRC6C	71	90.415	Bos_taurus
ENSCHOG00000000088	TNRC6C	72	90.530	ENSCJAG00000019431	TNRC6C	75	91.415	Callithrix_jacchus
ENSCHOG00000000088	TNRC6C	75	86.555	ENSCAFG00000005224	TNRC6C	72	88.889	Canis_familiaris
ENSCHOG00000000088	TNRC6C	75	88.376	ENSCAFG00020006661	TNRC6C	71	89.776	Canis_lupus_dingo
ENSCHOG00000000088	TNRC6C	75	90.792	ENSCHIG00000026004	TNRC6C	75	87.395	Capra_hircus
ENSCHOG00000000088	TNRC6C	72	85.325	ENSTSYG00000005403	TNRC6C	76	86.657	Carlito_syrichta
ENSCHOG00000000088	TNRC6C	76	84.034	ENSCAPG00000007307	TNRC6C	70	84.034	Cavia_aperea
ENSCHOG00000000088	TNRC6C	75	89.068	ENSCPOG00000000467	TNRC6C	76	90.287	Cavia_porcellus
ENSCHOG00000000088	TNRC6C	72	91.172	ENSCCAG00000030524	TNRC6C	75	92.051	Cebus_capucinus
ENSCHOG00000000088	TNRC6C	72	91.011	ENSCATG00000033135	TNRC6C	75	91.892	Cercocebus_atys
ENSCHOG00000000088	TNRC6C	75	90.514	ENSCLAG00000011139	TNRC6C	70	91.720	Chinchilla_lanigera
ENSCHOG00000000088	TNRC6C	75	85.498	ENSCSAG00000005167	TNRC6C	70	86.527	Chlorocebus_sabaeus
ENSCHOG00000000088	TNRC6C	75	90.821	ENSCPBG00000027960	TNRC6C	75	89.952	Chrysemys_picta_bellii
ENSCHOG00000000088	TNRC6C	72	91.172	ENSCANG00000041771	TNRC6C	75	92.051	Colobus_angolensis_palliatus
ENSCHOG00000000088	TNRC6C	75	88.235	ENSCGRG00001022686	Tnrc6c	71	88.976	Cricetulus_griseus_chok1gshd
ENSCHOG00000000088	TNRC6C	75	89.372	ENSCGRG00000018041	Tnrc6c	70	90.112	Cricetulus_griseus_crigri
ENSCHOG00000000088	TNRC6C	51	61.994	ENSCSEG00000012744	tnrc6c1	60	61.300	Cynoglossus_semilaevis
ENSCHOG00000000088	TNRC6C	73	70.872	ENSDARG00000076847	tnrc6c1	68	69.565	Danio_rerio
ENSCHOG00000000088	TNRC6C	75	91.597	ENSDNOG00000003247	TNRC6C	71	91.597	Dasypus_novemcinctus
ENSCHOG00000000088	TNRC6C	75	84.874	ENSDORG00000004558	Tnrc6c	75	85.308	Dipodomys_ordii
ENSCHOG00000000088	TNRC6C	66	89.916	ENSETEG00000005527	TNRC6C	66	89.916	Echinops_telfairi
ENSCHOG00000000088	TNRC6C	72	90.499	ENSEASG00005004799	TNRC6C	75	90.590	Equus_asinus_asinus
ENSCHOG00000000088	TNRC6C	75	90.499	ENSECAG00000012486	TNRC6C	70	90.590	Equus_caballus
ENSCHOG00000000088	TNRC6C	75	90.953	ENSEEUG00000010008	TNRC6C	76	91.040	Erinaceus_europaeus
ENSCHOG00000000088	TNRC6C	75	83.193	ENSFCAG00000028358	TNRC6C	71	88.818	Felis_catus
ENSCHOG00000000088	TNRC6C	72	84.034	ENSFALG00000000848	TNRC6C	76	84.034	Ficedula_albicollis
ENSCHOG00000000088	TNRC6C	75	89.228	ENSFDAG00000010368	TNRC6C	76	90.446	Fukomys_damarensis
ENSCHOG00000000088	TNRC6C	72	90.821	ENSGALG00000001725	TNRC6C	75	89.952	Gallus_gallus
ENSCHOG00000000088	TNRC6C	65	63.101	ENSGAFG00000019019	tnrc6c1	69	62.384	Gambusia_affinis
ENSCHOG00000000088	TNRC6C	66	62.117	ENSGACG00000012320	tnrc6c1	59	62.171	Gasterosteus_aculeatus
ENSCHOG00000000088	TNRC6C	75	90.499	ENSGAGG00000022043	TNRC6C	74	89.633	Gopherus_agassizii
ENSCHOG00000000088	TNRC6C	73	90.938	ENSGGOG00000011304	TNRC6C	75	91.892	Gorilla_gorilla
ENSCHOG00000000088	TNRC6C	65	66.387	ENSHBUG00000010846	tnrc6c1	73	67.227	Haplochromis_burtoni
ENSCHOG00000000088	TNRC6C	75	89.550	ENSHGLG00000004809	TNRC6C	70	90.764	Heterocephalus_glaber_female
ENSCHOG00000000088	TNRC6C	75	88.413	ENSHGLG00100012597	TNRC6C	70	89.623	Heterocephalus_glaber_male
ENSCHOG00000000088	TNRC6C	69	69.572	ENSIPUG00000000818	tnrc6c1	64	69.626	Ictalurus_punctatus
ENSCHOG00000000088	TNRC6C	75	91.011	ENSSTOG00000009101	TNRC6C	76	91.892	Ictidomys_tridecemlineatus
ENSCHOG00000000088	TNRC6C	75	89.666	ENSJJAG00000017055	Tnrc6c	69	89.606	Jaculus_jaculus
ENSCHOG00000000088	TNRC6C	52	64.706	ENSKMAG00000021023	tnrc6c1	66	64.706	Kryptolebias_marmoratus
ENSCHOG00000000088	TNRC6C	73	80.236	ENSLACG00000015283	TNRC6C	73	79.557	Latimeria_chalumnae
ENSCHOG00000000088	TNRC6C	70	75.234	ENSLOCG00000013377	tnrc6c1	66	76.324	Lepisosteus_oculatus
ENSCHOG00000000088	TNRC6C	75	88.854	ENSLAFG00000011122	TNRC6C	75	88.235	Loxodonta_africana
ENSCHOG00000000088	TNRC6C	72	91.172	ENSMFAG00000043943	TNRC6C	75	92.051	Macaca_fascicularis
ENSCHOG00000000088	TNRC6C	72	91.172	ENSMMUG00000011924	TNRC6C	75	92.051	Macaca_mulatta
ENSCHOG00000000088	TNRC6C	72	91.172	ENSMNEG00000030405	TNRC6C	75	92.051	Macaca_nemestrina
ENSCHOG00000000088	TNRC6C	72	91.011	ENSMLEG00000033436	TNRC6C	75	91.892	Mandrillus_leucophaeus
ENSCHOG00000000088	TNRC6C	51	63.636	ENSMAMG00000023613	tnrc6c1	64	63.636	Mastacembelus_armatus
ENSCHOG00000000088	TNRC6C	65	66.387	ENSMZEG00005010920	tnrc6c1	64	67.227	Maylandia_zebra
ENSCHOG00000000088	TNRC6C	75	79.225	ENSMGAG00000003906	TNRC6C	72	79.225	Meleagris_gallopavo
ENSCHOG00000000088	TNRC6C	68	87.599	ENSMAUG00000021618	Tnrc6c	71	88.346	Mesocricetus_auratus
ENSCHOG00000000088	TNRC6C	72	90.851	ENSMICG00000003952	TNRC6C	75	91.892	Microcebus_murinus
ENSCHOG00000000088	TNRC6C	75	89.372	ENSMOCG00000015879	Tnrc6c	76	90.112	Microtus_ochrogaster
ENSCHOG00000000088	TNRC6C	51	64.451	ENSMMOG00000005203	tnrc6c1	67	64.506	Mola_mola
ENSCHOG00000000088	TNRC6C	75	87.758	ENSMODG00000001785	TNRC6C	70	87.717	Monodelphis_domestica
ENSCHOG00000000088	TNRC6C	75	89.694	MGP_CAROLIEiJ_G0017465	Tnrc6c	76	90.431	Mus_caroli
ENSCHOG00000000088	TNRC6C	75	89.050	ENSMUSG00000025571	Tnrc6c	76	89.793	Mus_musculus
ENSCHOG00000000088	TNRC6C	75	89.694	MGP_PahariEiJ_G0018593	Tnrc6c	76	90.431	Mus_pahari
ENSCHOG00000000088	TNRC6C	75	88.889	MGP_SPRETEiJ_G0018309	Tnrc6c	76	89.633	Mus_spretus
ENSCHOG00000000088	TNRC6C	75	86.555	ENSMPUG00000013348	TNRC6C	69	86.555	Mustela_putorius_furo
ENSCHOG00000000088	TNRC6C	72	88.235	ENSMLUG00000014431	TNRC6C	70	88.235	Myotis_lucifugus
ENSCHOG00000000088	TNRC6C	75	87.898	ENSNGAG00000012203	Tnrc6c	70	88.959	Nannospalax_galili
ENSCHOG00000000088	TNRC6C	65	66.387	ENSNBRG00000005344	tnrc6c1	65	67.227	Neolamprologus_brichardi
ENSCHOG00000000088	TNRC6C	75	82.353	ENSNLEG00000000047	TNRC6C	71	82.353	Nomascus_leucogenys
ENSCHOG00000000088	TNRC6C	73	77.632	ENSMEUG00000005104	TNRC6C	75	77.632	Notamacropus_eugenii
ENSCHOG00000000088	TNRC6C	68	89.871	ENSODEG00000012499	TNRC6C	71	91.083	Octodon_degus
ENSCHOG00000000088	TNRC6C	66	63.482	ENSONIG00000002210	tnrc6c1	67	63.889	Oreochromis_niloticus
ENSCHOG00000000088	TNRC6C	65	85.027	ENSOCUG00000006122	TNRC6C	69	86.679	Oryctolagus_cuniculus
ENSCHOG00000000088	TNRC6C	63	61.728	ENSORLG00000009837	tnrc6c1	71	64.407	Oryzias_latipes
ENSCHOG00000000088	TNRC6C	63	61.728	ENSORLG00020016510	tnrc6c1	65	61.654	Oryzias_latipes_hni
ENSCHOG00000000088	TNRC6C	63	62.597	ENSOMEG00000000357	tnrc6c1	60	63.101	Oryzias_melastigma
ENSCHOG00000000088	TNRC6C	72	87.395	ENSOGAG00000007197	TNRC6C	76	87.395	Otolemur_garnettii
ENSCHOG00000000088	TNRC6C	70	97.778	ENSOARG00000006041	TNRC6C	67	97.778	Ovis_aries
ENSCHOG00000000088	TNRC6C	72	91.011	ENSPPAG00000027160	TNRC6C	75	91.892	Pan_paniscus
ENSCHOG00000000088	TNRC6C	75	83.193	ENSPPRG00000018881	TNRC6C	71	89.137	Panthera_pardus
ENSCHOG00000000088	TNRC6C	54	87.500	ENSPTIG00000008791	TNRC6C	52	87.500	Panthera_tigris_altaica
ENSCHOG00000000088	TNRC6C	72	91.172	ENSPTRG00000009699	TNRC6C	75	92.051	Pan_troglodytes
ENSCHOG00000000088	TNRC6C	72	91.172	ENSPANG00000019994	TNRC6C	75	92.051	Papio_anubis
ENSCHOG00000000088	TNRC6C	68	67.769	ENSPKIG00000005428	tnrc6c1	70	67.769	Paramormyrops_kingsleyae
ENSCHOG00000000088	TNRC6C	75	89.533	ENSPSIG00000018069	TNRC6C	76	88.676	Pelodiscus_sinensis
ENSCHOG00000000088	TNRC6C	75	88.394	ENSPEMG00000009785	Tnrc6c	72	89.134	Peromyscus_maniculatus_bairdii
ENSCHOG00000000088	TNRC6C	65	63.060	ENSPFOG00000012560	tnrc6c1	70	57.269	Poecilia_formosa
ENSCHOG00000000088	TNRC6C	65	67.227	ENSPLAG00000021055	tnrc6c1	67	67.227	Poecilia_latipinna
ENSCHOG00000000088	TNRC6C	75	85.952	ENSPPYG00000008679	TNRC6C	69	86.976	Pongo_abelii
ENSCHOG00000000088	TNRC6C	65	92.478	ENSPCAG00000012510	TNRC6C	66	92.241	Procavia_capensis
ENSCHOG00000000088	TNRC6C	72	91.172	ENSPCOG00000021451	TNRC6C	75	92.210	Propithecus_coquereli
ENSCHOG00000000088	TNRC6C	75	89.583	ENSPVAG00000002008	TNRC6C	76	89.744	Pteropus_vampyrus
ENSCHOG00000000088	TNRC6C	65	66.387	ENSPNYG00000014477	tnrc6c1	63	67.227	Pundamilia_nyererei
ENSCHOG00000000088	TNRC6C	68	89.694	ENSRNOG00000022395	Tnrc6c	71	90.431	Rattus_norvegicus
ENSCHOG00000000088	TNRC6C	72	91.332	ENSRBIG00000027777	TNRC6C	75	92.210	Rhinopithecus_bieti
ENSCHOG00000000088	TNRC6C	72	91.332	ENSRROG00000042912	TNRC6C	75	92.210	Rhinopithecus_roxellana
ENSCHOG00000000088	TNRC6C	75	85.241	ENSSBOG00000023981	TNRC6C	76	86.377	Saimiri_boliviensis_boliviensis
ENSCHOG00000000088	TNRC6C	60	68.720	ENSSFOG00015006475	tnrc6c1	69	69.159	Scleropages_formosus
ENSCHOG00000000088	TNRC6C	66	64.043	ENSSMAG00000012761	tnrc6c1	68	63.846	Scophthalmus_maximus
ENSCHOG00000000088	TNRC6C	66	63.889	ENSSDUG00000002366	tnrc6c1	62	64.055	Seriola_dumerili
ENSCHOG00000000088	TNRC6C	66	63.256	ENSSLDG00000025613	tnrc6c1	64	63.215	Seriola_lalandi_dorsalis
ENSCHOG00000000088	TNRC6C	70	88.362	ENSSARG00000006816	TNRC6C	71	88.362	Sorex_araneus
ENSCHOG00000000088	TNRC6C	58	84.034	ENSSPUG00000007341	TNRC6C	64	84.234	Sphenodon_punctatus
ENSCHOG00000000088	TNRC6C	54	61.224	ENSSPAG00000014977	tnrc6c1	58	63.988	Stegastes_partitus
ENSCHOG00000000088	TNRC6C	68	89.076	ENSSSCG00000034373	TNRC6C	75	89.076	Sus_scrofa
ENSCHOG00000000088	TNRC6C	75	90.193	ENSTGUG00000007733	TNRC6C	76	89.331	Taeniopygia_guttata
ENSCHOG00000000088	TNRC6C	60	62.400	ENSTRUG00000011685	tnrc6c1	69	63.780	Takifugu_rubripes
ENSCHOG00000000088	TNRC6C	61	66.116	ENSTNIG00000005273	tnrc6c1	80	66.116	Tetraodon_nigroviridis
ENSCHOG00000000088	TNRC6C	75	90.968	ENSTTRG00000010828	TNRC6C	76	90.256	Tursiops_truncatus
ENSCHOG00000000088	TNRC6C	75	84.034	ENSUMAG00000013614	TNRC6C	70	84.034	Ursus_maritimus
ENSCHOG00000000088	TNRC6C	68	89.677	ENSVVUG00000015268	TNRC6C	71	89.936	Vulpes_vulpes
ENSCHOG00000000088	TNRC6C	68	78.992	ENSXETG00000019470	tnrc6c	70	78.992	Xenopus_tropicalis
ENSCHOG00000000088	TNRC6C	65	67.227	ENSXMAG00000025971	tnrc6c1	69	62.693	Xiphophorus_maculatus