EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCHOG00000000180 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Choloepus_hoffmanni
Status
putative
Strand
Plus strand
Length
32359 bases
Position
chrGeneScaffold_2558:13418-45776
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHOP00000000157CPSF73-100_CPF11718.84.4e-2611
ENSCHOP00000000157Beta-CaspPF10996.81.2e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHOT00000000182CPSF3-2012004-ENSCHOP00000000157667 (aa)-UPI0001F9DFF8
Gene Model
Click here to download ENSCHOG00000000180's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000000180's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHOG00000000180CPSF38572.105ENSG00000119203CPSF386100.000Homo_sapiens
ENSCHOG00000000180CPSF35873.711ENSAPOG00000012241CPSF374100.000Acanthochromis_polyacanthus
ENSCHOG00000000180CPSF38561.268ENSAPOG00000022087cpsf385100.000Acanthochromis_polyacanthus
ENSCHOG00000000180CPSF38572.281ENSAMEG00000008493CPSF386100.000Ailuropoda_melanoleuca
ENSCHOG00000000180CPSF38561.092ENSACIG00000009846cpsf38961.092Amphilophus_citrinellus
ENSCHOG00000000180CPSF38563.269ENSACIG00000023663CPSF38963.269Amphilophus_citrinellus
ENSCHOG00000000180CPSF38563.093ENSAOCG00000010077CPSF385100.000Amphiprion_ocellaris
ENSCHOG00000000180CPSF38561.444ENSAOCG00000022056cpsf385100.000Amphiprion_ocellaris
ENSCHOG00000000180CPSF38561.620ENSAPEG00000019526cpsf385100.000Amphiprion_percula
ENSCHOG00000000180CPSF38563.093ENSAPEG00000021167CPSF385100.000Amphiprion_percula
ENSCHOG00000000180CPSF38561.160ENSATEG00000003959cpsf385100.000Anabas_testudineus
ENSCHOG00000000180CPSF38558.875ENSATEG00000014525CPSF385100.000Anabas_testudineus
ENSCHOG00000000180CPSF389100.000ENSAPLG00000006941CPSF387100.000Anas_platyrhynchos
ENSCHOG00000000180CPSF38566.842ENSACAG00000001759CPSF39066.842Anolis_carolinensis
ENSCHOG00000000180CPSF370100.000ENSANAG00000031254CPSF386100.000Aotus_nancymaae
ENSCHOG00000000180CPSF38561.268ENSACLG00000014484cpsf388100.000Astatotilapia_calliptera
ENSCHOG00000000180CPSF38563.269ENSACLG00000018846CPSF38963.269Astatotilapia_calliptera
ENSCHOG00000000180CPSF38563.620ENSAMXG00000004786cpsf385100.000Astyanax_mexicanus
ENSCHOG00000000180CPSF38572.281ENSBTAG00000019735CPSF386100.000Bos_taurus
ENSCHOG00000000180CPSF37146.804WBGene00013460cpsf-36846.804Caenorhabditis_elegans
ENSCHOG00000000180CPSF38572.281ENSCJAG00000006276CPSF387100.000Callithrix_jacchus
ENSCHOG00000000180CPSF38572.281ENSCAFG00000003375CPSF382100.000Canis_familiaris
ENSCHOG00000000180CPSF37675.595ENSCAFG00020026799CPSF385100.000Canis_lupus_dingo
ENSCHOG00000000180CPSF38572.281ENSCHIG00000013973CPSF386100.000Capra_hircus
ENSCHOG00000000180CPSF38572.105ENSTSYG00000002967CPSF386100.000Carlito_syrichta
ENSCHOG00000000180CPSF38571.053ENSCAPG00000013851CPSF389100.000Cavia_aperea
ENSCHOG00000000180CPSF38571.053ENSCPOG00000011299CPSF386100.000Cavia_porcellus
ENSCHOG00000000180CPSF38572.281ENSCCAG00000036730CPSF388100.000Cebus_capucinus
ENSCHOG00000000180CPSF38569.177ENSCATG00000014770CPSF386100.000Cercocebus_atys
ENSCHOG00000000180CPSF38570.877ENSCLAG00000002727CPSF386100.000Chinchilla_lanigera
ENSCHOG00000000180CPSF372100.000ENSCSAG00000007125CPSF379100.000Chlorocebus_sabaeus
ENSCHOG00000000180CPSF38569.772ENSCPBG00000014074CPSF385100.000Chrysemys_picta_bellii
ENSCHOG00000000180CPSF37655.842ENSCING00000007214-7355.842Ciona_intestinalis
ENSCHOG00000000180CPSF36893.939ENSCANG00000034435CPSF369100.000Colobus_angolensis_palliatus
ENSCHOG00000000180CPSF38571.579ENSCGRG00001013134Cpsf386100.000Cricetulus_griseus_chok1gshd
ENSCHOG00000000180CPSF38571.579ENSCGRG00000018319Cpsf386100.000Cricetulus_griseus_crigri
ENSCHOG00000000180CPSF38562.456ENSCSEG00000002021CPSF385100.000Cynoglossus_semilaevis
ENSCHOG00000000180CPSF38563.093ENSCVAG00000015067CPSF385100.000Cyprinodon_variegatus
ENSCHOG00000000180CPSF38563.620ENSDARG00000027649cpsf385100.000Danio_rerio
ENSCHOG00000000180CPSF370100.000ENSDNOG00000008940CPSF368100.000Dasypus_novemcinctus
ENSCHOG00000000180CPSF37675.595ENSDORG00000014263Cpsf381100.000Dipodomys_ordii
ENSCHOG00000000180CPSF37351.633FBgn0261065Cpsf737151.633Drosophila_melanogaster
ENSCHOG00000000180CPSF37663.095ENSETEG00000003893CPSF37763.095Echinops_telfairi
ENSCHOG00000000180CPSF37264.523ENSEBUG00000009018cpsf38355.952Eptatretus_burgeri
ENSCHOG00000000180CPSF38572.281ENSEASG00005003970CPSF386100.000Equus_asinus_asinus
ENSCHOG00000000180CPSF38572.281ENSECAG00000019911CPSF386100.000Equus_caballus
ENSCHOG00000000180CPSF368100.000ENSEEUG00000015422CPSF366100.000Erinaceus_europaeus
ENSCHOG00000000180CPSF38563.380ENSELUG00000013775cpsf385100.000Esox_lucius
ENSCHOG00000000180CPSF38572.281ENSFCAG00000007852CPSF386100.000Felis_catus
ENSCHOG00000000180CPSF38568.947ENSFALG00000006572CPSF38868.947Ficedula_albicollis
ENSCHOG00000000180CPSF38570.423ENSFDAG00000006317CPSF385100.000Fukomys_damarensis
ENSCHOG00000000180CPSF38560.211ENSFHEG00000014774cpsf385100.000Fundulus_heteroclitus
ENSCHOG00000000180CPSF38562.742ENSGMOG00000003157cpsf38262.742Gadus_morhua
ENSCHOG00000000180CPSF38568.772ENSGALG00000016424CPSF386100.000Gallus_gallus
ENSCHOG00000000180CPSF38563.028ENSGAFG00000008016CPSF385100.000Gambusia_affinis
ENSCHOG00000000180CPSF38560.105ENSGAFG00000019449cpsf38960.105Gambusia_affinis
ENSCHOG00000000180CPSF37062.955ENSGAGG00000025583CPSF39362.955Gopherus_agassizii
ENSCHOG00000000180CPSF38572.281ENSGGOG00000001757CPSF387100.000Gorilla_gorilla
ENSCHOG00000000180CPSF36148.775ENSHBUG00000014332CPSF39948.775Haplochromis_burtoni
ENSCHOG00000000180CPSF38561.268ENSHBUG00000001188cpsf385100.000Haplochromis_burtoni
ENSCHOG00000000180CPSF38570.526ENSHGLG00000000666CPSF386100.000Heterocephalus_glaber_female
ENSCHOG00000000180CPSF38570.526ENSHGLG00100007765CPSF386100.000Heterocephalus_glaber_male
ENSCHOG00000000180CPSF38562.214ENSHCOG00000015957CPSF384100.000Hippocampus_comes
ENSCHOG00000000180CPSF38560.984ENSHCOG00000007251cpsf385100.000Hippocampus_comes
ENSCHOG00000000180CPSF38562.917ENSIPUG00000023488cpsf385100.000Ictalurus_punctatus
ENSCHOG00000000180CPSF38571.930ENSSTOG00000004476CPSF386100.000Ictidomys_tridecemlineatus
ENSCHOG00000000180CPSF38570.702ENSJJAG00000023415Cpsf386100.000Jaculus_jaculus
ENSCHOG00000000180CPSF38560.739ENSKMAG00000002806cpsf385100.000Kryptolebias_marmoratus
ENSCHOG00000000180CPSF38563.269ENSKMAG00000007317CPSF385100.000Kryptolebias_marmoratus
ENSCHOG00000000180CPSF38558.627ENSLBEG00000020569cpsf380100.000Labrus_bergylta
ENSCHOG00000000180CPSF35151.765ENSLBEG00000015018-9051.765Labrus_bergylta
ENSCHOG00000000180CPSF37667.262ENSLBEG00000013492CPSF379100.000Labrus_bergylta
ENSCHOG00000000180CPSF37098.008ENSLACG00000008308CPSF376100.000Latimeria_chalumnae
ENSCHOG00000000180CPSF38564.211ENSLOCG00000016823cpsf385100.000Lepisosteus_oculatus
ENSCHOG00000000180CPSF38572.105ENSLAFG00000009467CPSF387100.000Loxodonta_africana
ENSCHOG00000000180CPSF38572.281ENSMFAG00000001339CPSF386100.000Macaca_fascicularis
ENSCHOG00000000180CPSF38572.281ENSMMUG00000018038CPSF377100.000Macaca_mulatta
ENSCHOG00000000180CPSF38557.018ENSMNEG00000039447CPSF385100.000Macaca_nemestrina
ENSCHOG00000000180CPSF38572.281ENSMLEG00000026825CPSF386100.000Mandrillus_leucophaeus
ENSCHOG00000000180CPSF38561.268ENSMAMG00000003076cpsf385100.000Mastacembelus_armatus
ENSCHOG00000000180CPSF38563.047ENSMAMG00000008835CPSF38963.047Mastacembelus_armatus
ENSCHOG00000000180CPSF38561.268ENSMZEG00005014358cpsf385100.000Maylandia_zebra
ENSCHOG00000000180CPSF38563.269ENSMZEG00005006258CPSF385100.000Maylandia_zebra
ENSCHOG00000000180CPSF38568.596ENSMGAG00000013995CPSF389100.000Meleagris_gallopavo
ENSCHOG00000000180CPSF35656.117ENSMAUG00000000166Cpsf310056.117Mesocricetus_auratus
ENSCHOG00000000180CPSF38566.667ENSMICG00000002363CPSF386100.000Microcebus_murinus
ENSCHOG00000000180CPSF38571.579ENSMOCG00000020067Cpsf386100.000Microtus_ochrogaster
ENSCHOG00000000180CPSF37266.736ENSMMOG00000018212CPSF37566.736Mola_mola
ENSCHOG00000000180CPSF36577.674ENSMMOG00000011923CPSF37477.209Mola_mola
ENSCHOG00000000180CPSF38569.671ENSMODG00000014703CPSF387100.000Monodelphis_domestica
ENSCHOG00000000180CPSF38561.687ENSMALG00000016416cpsf385100.000Monopterus_albus
ENSCHOG00000000180CPSF38562.783ENSMALG00000011474CPSF38962.783Monopterus_albus
ENSCHOG00000000180CPSF38571.579MGP_CAROLIEiJ_G0017640Cpsf386100.000Mus_caroli
ENSCHOG00000000180CPSF38571.579ENSMUSG00000054309Cpsf386100.000Mus_musculus
ENSCHOG00000000180CPSF38571.579MGP_PahariEiJ_G0029397Cpsf386100.000Mus_pahari
ENSCHOG00000000180CPSF38571.579MGP_SPRETEiJ_G0018481Cpsf386100.000Mus_spretus
ENSCHOG00000000180CPSF38571.404ENSMPUG00000013213CPSF386100.000Mustela_putorius_furo
ENSCHOG00000000180CPSF38571.278ENSMLUG00000010636CPSF386100.000Myotis_lucifugus
ENSCHOG00000000180CPSF38571.754ENSNGAG00000019836Cpsf386100.000Nannospalax_galili
ENSCHOG00000000180CPSF38560.915ENSNBRG00000004770cpsf386100.000Neolamprologus_brichardi
ENSCHOG00000000180CPSF38563.269ENSNBRG00000010525CPSF38963.269Neolamprologus_brichardi
ENSCHOG00000000180CPSF38572.281ENSNLEG00000013359CPSF387100.000Nomascus_leucogenys
ENSCHOG00000000180CPSF37772.407ENSMEUG00000013117-7572.407Notamacropus_eugenii
ENSCHOG00000000180CPSF38561.228ENSOPRG00000008902CPSF386100.000Ochotona_princeps
ENSCHOG00000000180CPSF38570.526ENSODEG00000003129CPSF386100.000Octodon_degus
ENSCHOG00000000180CPSF38561.620ENSONIG00000018812cpsf385100.000Oreochromis_niloticus
ENSCHOG00000000180CPSF38570.213ENSOANG00000008577CPSF310070.213Ornithorhynchus_anatinus
ENSCHOG00000000180CPSF38572.281ENSOCUG00000003728CPSF386100.000Oryctolagus_cuniculus
ENSCHOG00000000180CPSF38559.507ENSORLG00000018854cpsf385100.000Oryzias_latipes
ENSCHOG00000000180CPSF38559.507ENSORLG00020013331cpsf385100.000Oryzias_latipes_hni
ENSCHOG00000000180CPSF38559.507ENSORLG00015011017cpsf385100.000Oryzias_latipes_hsok
ENSCHOG00000000180CPSF38560.035ENSOMEG00000010647cpsf381100.000Oryzias_melastigma
ENSCHOG00000000180CPSF370100.000ENSOGAG00000001680CPSF372100.000Otolemur_garnettii
ENSCHOG00000000180CPSF38572.281ENSOARG00000015073CPSF386100.000Ovis_aries
ENSCHOG00000000180CPSF38572.281ENSPPAG00000042457CPSF386100.000Pan_paniscus
ENSCHOG00000000180CPSF38571.930ENSPPRG00000016790CPSF386100.000Panthera_pardus
ENSCHOG00000000180CPSF38571.930ENSPTIG00000003920CPSF386100.000Panthera_tigris_altaica
ENSCHOG00000000180CPSF38572.281ENSPTRG00000011638CPSF386100.000Pan_troglodytes
ENSCHOG00000000180CPSF38572.281ENSPANG00000016798CPSF386100.000Papio_anubis
ENSCHOG00000000180CPSF38564.261ENSPKIG00000023646cpsf385100.000Paramormyrops_kingsleyae
ENSCHOG00000000180CPSF38568.596ENSPSIG00000016144CPSF387100.000Pelodiscus_sinensis
ENSCHOG00000000180CPSF36148.395ENSPMGG00000015311CPSF39948.395Periophthalmus_magnuspinnatus
ENSCHOG00000000180CPSF37466.463ENSPMGG00000006141-8566.463Periophthalmus_magnuspinnatus
ENSCHOG00000000180CPSF38570.877ENSPEMG00000017668Cpsf386100.000Peromyscus_maniculatus_bairdii
ENSCHOG00000000180CPSF366100.000ENSPMAG00000004841cpsf382100.000Petromyzon_marinus
ENSCHOG00000000180CPSF370100.000ENSPCIG00000009823CPSF387100.000Phascolarctos_cinereus
ENSCHOG00000000180CPSF38562.676ENSPFOG00000010418-85100.000Poecilia_formosa
ENSCHOG00000000180CPSF38560.457ENSPFOG00000015922cpsf385100.000Poecilia_formosa
ENSCHOG00000000180CPSF38560.457ENSPLAG00000000882cpsf385100.000Poecilia_latipinna
ENSCHOG00000000180CPSF36148.762ENSPLAG00000021300-9948.762Poecilia_latipinna
ENSCHOG00000000180CPSF38560.633ENSPMEG00000018309cpsf385100.000Poecilia_mexicana
ENSCHOG00000000180CPSF38559.930ENSPREG00000004482CPSF385100.000Poecilia_reticulata
ENSCHOG00000000180CPSF38560.633ENSPREG00000014875cpsf38960.633Poecilia_reticulata
ENSCHOG00000000180CPSF38567.018ENSPPYG00000012666CPSF386100.000Pongo_abelii
ENSCHOG00000000180CPSF35584.064ENSPCAG00000015042CPSF35784.064Procavia_capensis
ENSCHOG00000000180CPSF35786.905ENSPCOG00000023016CPSF365100.000Propithecus_coquereli
ENSCHOG00000000180CPSF38572.183ENSPVAG00000005324CPSF386100.000Pteropus_vampyrus
ENSCHOG00000000180CPSF38561.268ENSPNYG00000004405cpsf385100.000Pundamilia_nyererei
ENSCHOG00000000180CPSF37269.087ENSPNYG00000021047CPSF38069.087Pundamilia_nyererei
ENSCHOG00000000180CPSF38563.269ENSPNAG00000023060cpsf385100.000Pygocentrus_nattereri
ENSCHOG00000000180CPSF38571.479ENSRNOG00000052418Cpsf386100.000Rattus_norvegicus
ENSCHOG00000000180CPSF37387.000ENSRBIG00000041615CPSF37787.000Rhinopithecus_bieti
ENSCHOG00000000180CPSF38572.281ENSRROG00000033792CPSF387100.000Rhinopithecus_roxellana
ENSCHOG00000000180CPSF37487.000ENSSBOG00000027263CPSF375100.000Saimiri_boliviensis_boliviensis
ENSCHOG00000000180CPSF38571.053ENSSHAG00000007024CPSF386100.000Sarcophilus_harrisii
ENSCHOG00000000180CPSF38564.437ENSSFOG00015002108cpsf385100.000Scleropages_formosus
ENSCHOG00000000180CPSF37268.880ENSSMAG00000020534CPSF375100.000Scophthalmus_maximus
ENSCHOG00000000180CPSF38563.333ENSSDUG00000018498CPSF385100.000Seriola_dumerili
ENSCHOG00000000180CPSF38561.444ENSSDUG00000002828cpsf383100.000Seriola_dumerili
ENSCHOG00000000180CPSF38561.444ENSSLDG00000008469cpsf383100.000Seriola_lalandi_dorsalis
ENSCHOG00000000180CPSF38563.445ENSSLDG00000005234CPSF385100.000Seriola_lalandi_dorsalis
ENSCHOG00000000180CPSF380100.000ENSSARG00000005186CPSF378100.000Sorex_araneus
ENSCHOG00000000180CPSF38567.073ENSSPUG00000015525CPSF386100.000Sphenodon_punctatus
ENSCHOG00000000180CPSF38563.620ENSSPAG00000002906CPSF385100.000Stegastes_partitus
ENSCHOG00000000180CPSF38561.444ENSSPAG00000018579cpsf385100.000Stegastes_partitus
ENSCHOG00000000180CPSF38572.056ENSSSCG00000020799CPSF386100.000Sus_scrofa
ENSCHOG00000000180CPSF38568.772ENSTGUG00000013016CPSF386100.000Taeniopygia_guttata
ENSCHOG00000000180CPSF36143.415ENSTRUG00000013905CPSF39943.415Takifugu_rubripes
ENSCHOG00000000180CPSF38561.268ENSTRUG00000007030cpsf384100.000Takifugu_rubripes
ENSCHOG00000000180CPSF36798.696ENSTBEG00000002707CPSF367100.000Tupaia_belangeri
ENSCHOG00000000180CPSF35974.634ENSTTRG00000000861CPSF360100.000Tursiops_truncatus
ENSCHOG00000000180CPSF37675.595ENSUAMG00000007535CPSF375100.000Ursus_americanus
ENSCHOG00000000180CPSF38572.281ENSUMAG00000003676CPSF38872.281Ursus_maritimus
ENSCHOG00000000180CPSF375100.000ENSVPAG00000008041CPSF379100.000Vicugna_pacos
ENSCHOG00000000180CPSF38572.281ENSVVUG00000002194CPSF386100.000Vulpes_vulpes
ENSCHOG00000000180CPSF38565.141ENSXETG00000008263cpsf385100.000Xenopus_tropicalis
ENSCHOG00000000180CPSF35644.205ENSXCOG00000000957-8744.205Xiphophorus_couchianus
ENSCHOG00000000180CPSF38560.457ENSXCOG00000019695cpsf385100.000Xiphophorus_couchianus
ENSCHOG00000000180CPSF38560.457ENSXMAG00000009784cpsf385100.000Xiphophorus_maculatus
ENSCHOG00000000180CPSF37997.610ENSXMAG00000027291CPSF385100.000Xiphophorus_maculatus

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