EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000000396 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 9497 bases
Position: chrGeneScaffold_1562:15431-24927
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000000350	R3H	PF01424.22	8.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000000399	R3HCC1-201	1383	-	ENSCHOP00000000350	460 (aa)	-	UPI0001F9E096

Gene Model

Click here to download ENSCHOG00000000396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000000396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000000396	R3HCC1	95	75.399	ENSG00000104679	R3HCC1	100	86.047	Homo_sapiens
ENSCHOG00000000396	R3HCC1	76	40.704	ENSAPOG00000003616	r3hcc1	67	45.946	Acanthochromis_polyacanthus
ENSCHOG00000000396	R3HCC1	96	77.045	ENSAMEG00000002963	R3HCC1	91	76.364	Ailuropoda_melanoleuca
ENSCHOG00000000396	R3HCC1	93	33.906	ENSACIG00000017144	r3hcc1	99	33.262	Amphilophus_citrinellus
ENSCHOG00000000396	R3HCC1	90	33.958	ENSAOCG00000003945	r3hcc1	97	34.023	Amphiprion_ocellaris
ENSCHOG00000000396	R3HCC1	90	33.489	ENSAPEG00000003613	r3hcc1	97	33.796	Amphiprion_percula
ENSCHOG00000000396	R3HCC1	58	44.286	ENSATEG00000023860	r3hcc1	69	44.667	Anabas_testudineus
ENSCHOG00000000396	R3HCC1	97	46.507	ENSACAG00000016627	R3HCC1	99	47.854	Anolis_carolinensis
ENSCHOG00000000396	R3HCC1	96	77.500	ENSANAG00000036169	R3HCC1	94	77.500	Aotus_nancymaae
ENSCHOG00000000396	R3HCC1	96	74.434	ENSBTAG00000025830	R3HCC1	96	74.434	Bos_taurus
ENSCHOG00000000396	R3HCC1	96	75.909	ENSCJAG00000020118	R3HCC1	99	67.963	Callithrix_jacchus
ENSCHOG00000000396	R3HCC1	96	72.955	ENSCAFG00000009210	R3HCC1	95	72.955	Canis_familiaris
ENSCHOG00000000396	R3HCC1	84	70.513	ENSCAFG00020012870	R3HCC1	86	71.046	Canis_lupus_dingo
ENSCHOG00000000396	R3HCC1	95	69.824	ENSCHIG00000009107	R3HCC1	98	69.824	Capra_hircus
ENSCHOG00000000396	R3HCC1	96	78.182	ENSTSYG00000000511	R3HCC1	77	78.182	Carlito_syrichta
ENSCHOG00000000396	R3HCC1	86	56.452	ENSCAPG00000015813	R3HCC1	99	56.221	Cavia_aperea
ENSCHOG00000000396	R3HCC1	95	62.737	ENSCPOG00000009696	R3HCC1	99	62.526	Cavia_porcellus
ENSCHOG00000000396	R3HCC1	96	76.591	ENSCCAG00000037811	R3HCC1	99	68.650	Cebus_capucinus
ENSCHOG00000000396	R3HCC1	99	75.165	ENSCATG00000032971	R3HCC1	98	68.578	Cercocebus_atys
ENSCHOG00000000396	R3HCC1	97	70.562	ENSCLAG00000015556	R3HCC1	85	70.337	Chinchilla_lanigera
ENSCHOG00000000396	R3HCC1	99	74.725	ENSCSAG00000016250	R3HCC1	91	75.854	Chlorocebus_sabaeus
ENSCHOG00000000396	R3HCC1	99	75.824	ENSCANG00000029441	R3HCC1	91	76.310	Colobus_angolensis_palliatus
ENSCHOG00000000396	R3HCC1	95	61.506	ENSCGRG00001014977	R3hcc1	99	61.392	Cricetulus_griseus_chok1gshd
ENSCHOG00000000396	R3HCC1	95	61.506	ENSCGRG00000004454	R3hcc1	99	61.392	Cricetulus_griseus_crigri
ENSCHOG00000000396	R3HCC1	92	33.258	ENSCSEG00000005748	r3hcc1	99	32.093	Cynoglossus_semilaevis
ENSCHOG00000000396	R3HCC1	83	31.472	ENSCVAG00000002640	r3hcc1	98	30.711	Cyprinodon_variegatus
ENSCHOG00000000396	R3HCC1	93	34.579	ENSDARG00000099593	r3hcc1	98	34.499	Danio_rerio
ENSCHOG00000000396	R3HCC1	99	81.099	ENSDNOG00000007168	R3HCC1	91	82.460	Dasypus_novemcinctus
ENSCHOG00000000396	R3HCC1	95	63.354	ENSDORG00000026365	R3hcc1	99	64.346	Dipodomys_ordii
ENSCHOG00000000396	R3HCC1	99	66.231	ENSETEG00000001147	R3HCC1	97	66.966	Echinops_telfairi
ENSCHOG00000000396	R3HCC1	95	79.954	ENSEASG00005018782	R3HCC1	80	79.954	Equus_asinus_asinus
ENSCHOG00000000396	R3HCC1	95	79.499	ENSECAG00000025013	R3HCC1	97	79.499	Equus_caballus
ENSCHOG00000000396	R3HCC1	100	70.870	ENSEEUG00000011918	R3HCC1	97	71.910	Erinaceus_europaeus
ENSCHOG00000000396	R3HCC1	89	34.773	ENSELUG00000023650	r3hcc1	99	35.308	Esox_lucius
ENSCHOG00000000396	R3HCC1	99	75.604	ENSFCAG00000012395	R3HCC1	96	76.591	Felis_catus
ENSCHOG00000000396	R3HCC1	96	64.392	ENSFDAG00000001572	R3HCC1	100	64.043	Fukomys_damarensis
ENSCHOG00000000396	R3HCC1	61	37.931	ENSGMOG00000017590	-	82	37.931	Gadus_morhua
ENSCHOG00000000396	R3HCC1	93	35.000	ENSGAFG00000008747	-	91	33.929	Gambusia_affinis
ENSCHOG00000000396	R3HCC1	97	34.071	ENSGACG00000008447	r3hcc1	75	43.919	Gasterosteus_aculeatus
ENSCHOG00000000396	R3HCC1	75	59.763	ENSGAGG00000018009	R3HCC1	50	61.350	Gopherus_agassizii
ENSCHOG00000000396	R3HCC1	99	75.165	ENSGGOG00000013817	R3HCC1	99	75.688	Gorilla_gorilla
ENSCHOG00000000396	R3HCC1	96	69.977	ENSHGLG00000010517	R3HCC1	92	69.180	Heterocephalus_glaber_female
ENSCHOG00000000396	R3HCC1	96	69.977	ENSHGLG00100006388	R3HCC1	92	69.180	Heterocephalus_glaber_male
ENSCHOG00000000396	R3HCC1	64	44.444	ENSHCOG00000011745	r3hcc1	72	44.025	Hippocampus_comes
ENSCHOG00000000396	R3HCC1	94	36.927	ENSIPUG00000024504	r3hcc1	87	37.156	Ictalurus_punctatus
ENSCHOG00000000396	R3HCC1	95	66.213	ENSSTOG00000027130	R3HCC1	94	66.213	Ictidomys_tridecemlineatus
ENSCHOG00000000396	R3HCC1	96	64.871	ENSJJAG00000013075	R3hcc1	99	65.517	Jaculus_jaculus
ENSCHOG00000000396	R3HCC1	93	40.308	ENSLACG00000011894	R3HCC1	97	40.000	Latimeria_chalumnae
ENSCHOG00000000396	R3HCC1	93	36.199	ENSLOCG00000015442	r3hcc1	99	35.545	Lepisosteus_oculatus
ENSCHOG00000000396	R3HCC1	99	69.556	ENSLAFG00000016137	R3HCC1	96	70.928	Loxodonta_africana
ENSCHOG00000000396	R3HCC1	99	74.945	ENSMFAG00000032894	R3HCC1	98	68.349	Macaca_fascicularis
ENSCHOG00000000396	R3HCC1	99	75.165	ENSMMUG00000016655	R3HCC1	98	68.578	Macaca_mulatta
ENSCHOG00000000396	R3HCC1	99	74.725	ENSMNEG00000043283	R3HCC1	98	68.119	Macaca_nemestrina
ENSCHOG00000000396	R3HCC1	99	75.385	ENSMLEG00000030147	R3HCC1	91	76.310	Mandrillus_leucophaeus
ENSCHOG00000000396	R3HCC1	88	31.818	ENSMAMG00000018146	r3hcc1	98	31.663	Mastacembelus_armatus
ENSCHOG00000000396	R3HCC1	96	44.321	ENSMGAG00000001356	R3HCC1	92	44.295	Meleagris_gallopavo
ENSCHOG00000000396	R3HCC1	53	64.754	ENSMAUG00000016096	R3hcc1	99	62.179	Mesocricetus_auratus
ENSCHOG00000000396	R3HCC1	99	75.604	ENSMICG00000011146	R3HCC1	95	76.404	Microcebus_murinus
ENSCHOG00000000396	R3HCC1	94	48.430	ENSMODG00000016809	-	100	49.103	Monodelphis_domestica
ENSCHOG00000000396	R3HCC1	60	45.223	ENSMALG00000000731	r3hcc1	67	45.223	Monopterus_albus
ENSCHOG00000000396	R3HCC1	94	60.494	ENSMUSG00000034194	R3hcc1	98	60.581	Mus_musculus
ENSCHOG00000000396	R3HCC1	94	60.082	MGP_SPRETEiJ_G0020359	R3hcc1	98	56.762	Mus_spretus
ENSCHOG00000000396	R3HCC1	96	76.364	ENSMPUG00000003457	R3HCC1	87	76.364	Mustela_putorius_furo
ENSCHOG00000000396	R3HCC1	97	73.826	ENSMLUG00000000266	R3HCC1	93	74.497	Myotis_lucifugus
ENSCHOG00000000396	R3HCC1	96	69.130	ENSNGAG00000016747	R3hcc1	100	69.348	Nannospalax_galili
ENSCHOG00000000396	R3HCC1	87	76.119	ENSNLEG00000015944	R3HCC1	86	76.119	Nomascus_leucogenys
ENSCHOG00000000396	R3HCC1	94	57.859	ENSMEUG00000010587	R3HCC1	97	57.631	Notamacropus_eugenii
ENSCHOG00000000396	R3HCC1	98	65.646	ENSOPRG00000013390	R3HCC1	95	66.366	Ochotona_princeps
ENSCHOG00000000396	R3HCC1	94	63.966	ENSODEG00000007529	R3HCC1	99	64.407	Octodon_degus
ENSCHOG00000000396	R3HCC1	94	58.182	ENSOANG00000013877	R3HCC1	96	59.091	Ornithorhynchus_anatinus
ENSCHOG00000000396	R3HCC1	95	67.574	ENSOCUG00000023554	R3HCC1	85	68.027	Oryctolagus_cuniculus
ENSCHOG00000000396	R3HCC1	89	33.654	ENSORLG00000016816	r3hcc1	99	33.413	Oryzias_latipes
ENSCHOG00000000396	R3HCC1	89	33.654	ENSORLG00020012005	r3hcc1	99	33.894	Oryzias_latipes_hni
ENSCHOG00000000396	R3HCC1	89	34.360	ENSORLG00015007018	r3hcc1	99	34.588	Oryzias_latipes_hsok
ENSCHOG00000000396	R3HCC1	89	33.886	ENSOMEG00000000816	r3hcc1	99	33.175	Oryzias_melastigma
ENSCHOG00000000396	R3HCC1	97	71.236	ENSOGAG00000001291	R3HCC1	93	71.236	Otolemur_garnettii
ENSCHOG00000000396	R3HCC1	95	75.283	ENSOARG00000010146	R3HCC1	96	75.283	Ovis_aries
ENSCHOG00000000396	R3HCC1	95	75.626	ENSPPAG00000033165	R3HCC1	99	75.459	Pan_paniscus
ENSCHOG00000000396	R3HCC1	96	76.136	ENSPPRG00000002522	R3HCC1	99	76.364	Panthera_pardus
ENSCHOG00000000396	R3HCC1	88	75.931	ENSPTIG00000011230	R3HCC1	94	76.441	Panthera_tigris_altaica
ENSCHOG00000000396	R3HCC1	97	75.506	ENSPTRG00000020076	R3HCC1	100	70.136	Pan_troglodytes
ENSCHOG00000000396	R3HCC1	99	74.945	ENSPANG00000000453	R3HCC1	91	75.854	Papio_anubis
ENSCHOG00000000396	R3HCC1	85	36.816	ENSPKIG00000020397	-	94	36.070	Paramormyrops_kingsleyae
ENSCHOG00000000396	R3HCC1	85	36.111	ENSPKIG00000014426	-	93	34.336	Paramormyrops_kingsleyae
ENSCHOG00000000396	R3HCC1	96	47.300	ENSPSIG00000017664	R3HCC1	99	46.868	Pelodiscus_sinensis
ENSCHOG00000000396	R3HCC1	96	62.162	ENSPEMG00000007118	R3hcc1	99	61.746	Peromyscus_maniculatus_bairdii
ENSCHOG00000000396	R3HCC1	86	53.528	ENSPCIG00000022718	-	83	53.771	Phascolarctos_cinereus
ENSCHOG00000000396	R3HCC1	93	35.023	ENSPFOG00000022301	r3hcc1	90	32.265	Poecilia_formosa
ENSCHOG00000000396	R3HCC1	93	34.932	ENSPLAG00000010794	r3hcc1	90	32.494	Poecilia_latipinna
ENSCHOG00000000396	R3HCC1	93	35.023	ENSPMEG00000022515	r3hcc1	90	32.265	Poecilia_mexicana
ENSCHOG00000000396	R3HCC1	93	33.410	ENSPREG00000000713	r3hcc1	90	32.723	Poecilia_reticulata
ENSCHOG00000000396	R3HCC1	87	75.188	ENSPPYG00000018436	R3HCC1	98	75.188	Pongo_abelii
ENSCHOG00000000396	R3HCC1	72	86.275	ENSPCAG00000012229	R3HCC1	70	86.275	Procavia_capensis
ENSCHOG00000000396	R3HCC1	96	76.697	ENSPCOG00000027554	R3HCC1	100	76.697	Propithecus_coquereli
ENSCHOG00000000396	R3HCC1	98	74.009	ENSPVAG00000009829	R3HCC1	98	74.009	Pteropus_vampyrus
ENSCHOG00000000396	R3HCC1	63	43.750	ENSPNAG00000023875	r3hcc1	99	33.173	Pygocentrus_nattereri
ENSCHOG00000000396	R3HCC1	98	61.446	ENSRNOG00000016777	AABR07018321.1	72	76.364	Rattus_norvegicus
ENSCHOG00000000396	R3HCC1	95	76.606	ENSRBIG00000028045	R3HCC1	99	76.606	Rhinopithecus_bieti
ENSCHOG00000000396	R3HCC1	99	76.044	ENSRROG00000031126	R3HCC1	98	69.495	Rhinopithecus_roxellana
ENSCHOG00000000396	R3HCC1	96	76.018	ENSSBOG00000022590	R3HCC1	100	76.018	Saimiri_boliviensis_boliviensis
ENSCHOG00000000396	R3HCC1	95	48.322	ENSSHAG00000016526	-	63	69.935	Sarcophilus_harrisii
ENSCHOG00000000396	R3HCC1	93	30.645	ENSSFOG00015013507	r3hcc1	98	34.559	Scleropages_formosus
ENSCHOG00000000396	R3HCC1	88	33.032	ENSSMAG00000008647	r3hcc1	98	31.507	Scophthalmus_maximus
ENSCHOG00000000396	R3HCC1	93	33.978	ENSSDUG00000022786	r3hcc1	70	45.578	Seriola_dumerili
ENSCHOG00000000396	R3HCC1	93	33.621	ENSSLDG00000019031	r3hcc1	73	45.578	Seriola_lalandi_dorsalis
ENSCHOG00000000396	R3HCC1	51	77.143	ENSSARG00000013514	-	53	77.143	Sorex_araneus
ENSCHOG00000000396	R3HCC1	90	33.408	ENSSPAG00000013497	r3hcc1	97	32.809	Stegastes_partitus
ENSCHOG00000000396	R3HCC1	96	76.818	ENSSSCG00000039915	-	93	76.818	Sus_scrofa
ENSCHOG00000000396	R3HCC1	94	69.816	ENSSSCG00000037347	-	89	69.816	Sus_scrofa
ENSCHOG00000000396	R3HCC1	92	32.420	ENSTRUG00000015880	r3hcc1	98	32.192	Takifugu_rubripes
ENSCHOG00000000396	R3HCC1	97	69.283	ENSTTRG00000012247	R3HCC1	96	69.283	Tursiops_truncatus
ENSCHOG00000000396	R3HCC1	95	75.973	ENSUAMG00000007344	R3HCC1	98	75.286	Ursus_americanus
ENSCHOG00000000396	R3HCC1	96	73.409	ENSVVUG00000005056	R3HCC1	95	73.409	Vulpes_vulpes