EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000000561 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 2439 bases
Position: chrGeneScaffold_2852:11284-13722
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000000499	RRM_1	PF00076.22	8.4e-20	1	2
ENSCHOP00000000499	RRM_1	PF00076.22	8.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000000562	SRSF6-201	1038	-	ENSCHOP00000000499	345 (aa)	-	UPI0001F9E115

Gene Model

Click here to download ENSCHOG00000000561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000000561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000000561	SRSF6	77	100.000	ENSG00000124193	SRSF6	100	83.237	Homo_sapiens
ENSCHOG00000000561	SRSF6	86	97.222	ENSAMEG00000003710	SRSF6	85	97.222	Ailuropoda_melanoleuca
ENSCHOG00000000561	SRSF6	54	88.889	ENSACIG00000020091	-	95	49.606	Amphilophus_citrinellus
ENSCHOG00000000561	SRSF6	53	59.140	ENSATEG00000007255	-	50	86.111	Anabas_testudineus
ENSCHOG00000000561	SRSF6	77	94.444	ENSACAG00000002061	SRSF6	78	94.444	Anolis_carolinensis
ENSCHOG00000000561	SRSF6	77	100.000	ENSANAG00000024080	SRSF6	100	82.370	Aotus_nancymaae
ENSCHOG00000000561	SRSF6	100	82.609	ENSBTAG00000008527	SRSF6	100	82.609	Bos_taurus
ENSCHOG00000000561	SRSF6	77	80.524	ENSCJAG00000048403	SRSF6	99	80.524	Callithrix_jacchus
ENSCHOG00000000561	SRSF6	100	82.609	ENSCAFG00000009289	SRSF6	100	82.609	Canis_familiaris
ENSCHOG00000000561	SRSF6	100	82.609	ENSCAFG00020013559	SRSF6	100	82.609	Canis_lupus_dingo
ENSCHOG00000000561	SRSF6	100	82.899	ENSCHIG00000009148	-	100	82.899	Capra_hircus
ENSCHOG00000000561	SRSF6	100	82.899	ENSCHIG00000015890	-	100	82.899	Capra_hircus
ENSCHOG00000000561	SRSF6	100	82.609	ENSTSYG00000026476	SRSF6	100	82.609	Carlito_syrichta
ENSCHOG00000000561	SRSF6	77	100.000	ENSCCAG00000026018	-	100	82.659	Cebus_capucinus
ENSCHOG00000000561	SRSF6	100	83.478	ENSCATG00000030794	SRSF6	100	83.478	Cercocebus_atys
ENSCHOG00000000561	SRSF6	100	82.609	ENSCLAG00000010247	SRSF6	100	82.609	Chinchilla_lanigera
ENSCHOG00000000561	SRSF6	100	83.478	ENSCSAG00000014022	SRSF6	100	83.478	Chlorocebus_sabaeus
ENSCHOG00000000561	SRSF6	100	82.899	ENSCANG00000042529	-	100	82.899	Colobus_angolensis_palliatus
ENSCHOG00000000561	SRSF6	100	82.609	ENSCANG00000037774	-	100	82.609	Colobus_angolensis_palliatus
ENSCHOG00000000561	SRSF6	77	97.222	ENSCGRG00001022339	Srsf6	79	97.222	Cricetulus_griseus_chok1gshd
ENSCHOG00000000561	SRSF6	57	94.872	ENSCGRG00000006618	Srsf6	92	94.898	Cricetulus_griseus_crigri
ENSCHOG00000000561	SRSF6	77	100.000	ENSDNOG00000008410	SRSF6	78	100.000	Dasypus_novemcinctus
ENSCHOG00000000561	SRSF6	100	83.188	ENSDORG00000028378	Srsf6	100	83.188	Dipodomys_ordii
ENSCHOG00000000561	SRSF6	76	100.000	ENSETEG00000006221	SRSF6	79	100.000	Echinops_telfairi
ENSCHOG00000000561	SRSF6	57	93.846	ENSEEUG00000002324	SRSF6	90	93.434	Erinaceus_europaeus
ENSCHOG00000000561	SRSF6	100	82.609	ENSFCAG00000032814	SRSF6	100	82.609	Felis_catus
ENSCHOG00000000561	SRSF6	94	81.790	ENSFDAG00000012191	SRSF6	93	100.000	Fukomys_damarensis
ENSCHOG00000000561	SRSF6	75	97.222	ENSGALG00000000990	SRSF6	78	97.222	Gallus_gallus
ENSCHOG00000000561	SRSF6	77	100.000	ENSGGOG00000009808	SRSF6	100	83.237	Gorilla_gorilla
ENSCHOG00000000561	SRSF6	100	82.609	ENSHGLG00000007348	SRSF6	100	82.609	Heterocephalus_glaber_female
ENSCHOG00000000561	SRSF6	100	82.319	ENSHGLG00100005043	SRSF6	100	82.319	Heterocephalus_glaber_male
ENSCHOG00000000561	SRSF6	100	82.319	ENSSTOG00000010866	SRSF6	79	100.000	Ictidomys_tridecemlineatus
ENSCHOG00000000561	SRSF6	69	95.397	ENSLAFG00000006682	SRSF6	91	95.319	Loxodonta_africana
ENSCHOG00000000561	SRSF6	100	83.478	ENSMFAG00000036925	SRSF6	100	83.478	Macaca_fascicularis
ENSCHOG00000000561	SRSF6	100	83.478	ENSMMUG00000006742	SRSF6	100	83.478	Macaca_mulatta
ENSCHOG00000000561	SRSF6	100	83.478	ENSMNEG00000027392	-	100	83.478	Macaca_nemestrina
ENSCHOG00000000561	SRSF6	100	82.609	ENSMNEG00000038270	-	100	82.609	Macaca_nemestrina
ENSCHOG00000000561	SRSF6	63	96.759	ENSMLEG00000031524	SRSF6	100	96.759	Mandrillus_leucophaeus
ENSCHOG00000000561	SRSF6	77	100.000	ENSMICG00000008537	SRSF6	78	100.000	Microcebus_murinus
ENSCHOG00000000561	SRSF6	57	94.872	ENSMOCG00000018738	Srsf6	92	94.898	Microtus_ochrogaster
ENSCHOG00000000561	SRSF6	77	97.222	MGP_CAROLIEiJ_G0024606	Srsf6	79	97.222	Mus_caroli
ENSCHOG00000000561	SRSF6	77	97.222	ENSMUSG00000016921	Srsf6	79	97.222	Mus_musculus
ENSCHOG00000000561	SRSF6	77	97.222	MGP_PahariEiJ_G0026050	Srsf6	79	97.222	Mus_pahari
ENSCHOG00000000561	SRSF6	77	97.222	MGP_SPRETEiJ_G0025528	Srsf6	79	97.222	Mus_spretus
ENSCHOG00000000561	SRSF6	83	80.556	ENSMPUG00000017692	SRSF6	99	80.556	Mustela_putorius_furo
ENSCHOG00000000561	SRSF6	93	79.503	ENSMLUG00000016618	SRSF6	77	95.745	Myotis_lucifugus
ENSCHOG00000000561	SRSF6	99	80.882	ENSNGAG00000017560	Srsf6	99	80.882	Nannospalax_galili
ENSCHOG00000000561	SRSF6	77	100.000	ENSNLEG00000006524	SRSF6	100	83.237	Nomascus_leucogenys
ENSCHOG00000000561	SRSF6	75	96.525	ENSOPRG00000002017	-	91	97.021	Ochotona_princeps
ENSCHOG00000000561	SRSF6	59	98.522	ENSOCUG00000009785	-	79	100.000	Oryctolagus_cuniculus
ENSCHOG00000000561	SRSF6	77	100.000	ENSOGAG00000014468	SRSF6	78	100.000	Otolemur_garnettii
ENSCHOG00000000561	SRSF6	86	97.222	ENSOARG00000003117	SRSF6	86	97.222	Ovis_aries
ENSCHOG00000000561	SRSF6	72	94.444	ENSPPAG00000043131	-	85	94.444	Pan_paniscus
ENSCHOG00000000561	SRSF6	77	100.000	ENSPPAG00000034327	-	85	100.000	Pan_paniscus
ENSCHOG00000000561	SRSF6	100	82.609	ENSPPRG00000008917	SRSF6	100	82.609	Panthera_pardus
ENSCHOG00000000561	SRSF6	63	96.296	ENSPTIG00000019153	SRSF6	100	96.296	Panthera_tigris_altaica
ENSCHOG00000000561	SRSF6	72	94.444	ENSPTRG00000046274	-	85	94.444	Pan_troglodytes
ENSCHOG00000000561	SRSF6	77	100.000	ENSPTRG00000044686	-	100	82.948	Pan_troglodytes
ENSCHOG00000000561	SRSF6	100	83.478	ENSPANG00000035224	SRSF6	100	83.478	Papio_anubis
ENSCHOG00000000561	SRSF6	52	53.933	ENSPKIG00000015703	-	60	75.000	Paramormyrops_kingsleyae
ENSCHOG00000000561	SRSF6	77	100.000	ENSPPYG00000011019	SRSF6	100	83.237	Pongo_abelii
ENSCHOG00000000561	SRSF6	100	83.526	ENSPCOG00000026364	SRSF6	100	83.526	Propithecus_coquereli
ENSCHOG00000000561	SRSF6	77	94.444	ENSPVAG00000015232	SRSF6	78	94.444	Pteropus_vampyrus
ENSCHOG00000000561	SRSF6	77	97.222	ENSRNOG00000006380	Srsf6	79	97.222	Rattus_norvegicus
ENSCHOG00000000561	SRSF6	86	100.000	ENSRBIG00000041414	SRSF6	87	100.000	Rhinopithecus_bieti
ENSCHOG00000000561	SRSF6	100	82.899	ENSRROG00000029989	SRSF6	100	82.899	Rhinopithecus_roxellana
ENSCHOG00000000561	SRSF6	77	100.000	ENSSBOG00000033708	-	100	82.370	Saimiri_boliviensis_boliviensis
ENSCHOG00000000561	SRSF6	75	96.139	ENSSARG00000001602	SRSF6	100	96.139	Sorex_araneus
ENSCHOG00000000561	SRSF6	100	82.319	ENSSSCG00000007362	SRSF6	100	82.319	Sus_scrofa
ENSCHOG00000000561	SRSF6	67	96.087	ENSTBEG00000013448	SRSF6	82	96.154	Tupaia_belangeri
ENSCHOG00000000561	SRSF6	68	96.596	ENSTTRG00000015410	SRSF6	91	96.170	Tursiops_truncatus
ENSCHOG00000000561	SRSF6	100	82.609	ENSUAMG00000003559	SRSF6	100	82.609	Ursus_americanus
ENSCHOG00000000561	SRSF6	63	96.296	ENSUMAG00000001154	SRSF6	100	96.296	Ursus_maritimus
ENSCHOG00000000561	SRSF6	75	100.000	ENSVPAG00000003016	SRSF6	76	100.000	Vicugna_pacos