EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000000642 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 714 bases
Position: chrscaffold_33290:3117-3830
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000000569	RNase_T	PF00929.24	2.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000000643	-	714	-	ENSCHOP00000000569	237 (aa)	-	UPI0001F9E16D

Gene Model

Click here to download ENSCHOG00000000642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000000642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000000642	-	59	97.857	ENSCHOG00000013497	REXO2	100	97.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000000642	-	100	94.515	ENSG00000076043	REXO2	100	97.340	Homo_sapiens
ENSCHOG00000000642	-	100	95.359	ENSAMEG00000013263	REXO2	100	95.359	Ailuropoda_melanoleuca
ENSCHOG00000000642	-	76	80.110	ENSACIG00000023553	smfn	97	80.110	Amphilophus_citrinellus
ENSCHOG00000000642	-	54	73.643	ENSAOCG00000011565	smfn	79	73.643	Amphiprion_ocellaris
ENSCHOG00000000642	-	81	78.756	ENSAPEG00000012435	smfn	71	78.756	Amphiprion_percula
ENSCHOG00000000642	-	96	70.925	ENSATEG00000015385	smfn	81	70.925	Anabas_testudineus
ENSCHOG00000000642	-	86	83.415	ENSAPLG00000005045	REXO2	100	83.415	Anas_platyrhynchos
ENSCHOG00000000642	-	82	70.256	ENSACAG00000011631	REXO2	88	72.193	Anolis_carolinensis
ENSCHOG00000000642	-	100	95.359	ENSANAG00000020834	REXO2	100	95.359	Aotus_nancymaae
ENSCHOG00000000642	-	61	72.222	ENSANAG00000027457	-	99	68.750	Aotus_nancymaae
ENSCHOG00000000642	-	95	71.875	ENSACLG00000024566	smfn	98	77.660	Astatotilapia_calliptera
ENSCHOG00000000642	-	100	95.359	ENSBTAG00000005843	REXO2	100	95.359	Bos_taurus
ENSCHOG00000000642	-	77	44.809	WBGene00007429	C08B6.8	88	53.623	Caenorhabditis_elegans
ENSCHOG00000000642	-	100	94.515	ENSCJAG00000012434	REXO2	100	94.515	Callithrix_jacchus
ENSCHOG00000000642	-	100	94.515	ENSCAFG00000013511	REXO2	100	94.515	Canis_familiaris
ENSCHOG00000000642	-	100	95.359	ENSCAFG00020002513	REXO2	100	95.359	Canis_lupus_dingo
ENSCHOG00000000642	-	100	95.781	ENSCHIG00000009264	REXO2	100	95.781	Capra_hircus
ENSCHOG00000000642	-	82	84.615	ENSTSYG00000027948	-	100	84.615	Carlito_syrichta
ENSCHOG00000000642	-	100	94.515	ENSTSYG00000002237	REXO2	100	94.515	Carlito_syrichta
ENSCHOG00000000642	-	79	97.872	ENSCAPG00000006093	REXO2	100	97.872	Cavia_aperea
ENSCHOG00000000642	-	100	95.359	ENSCPOG00000010548	REXO2	100	95.359	Cavia_porcellus
ENSCHOG00000000642	-	100	94.515	ENSCCAG00000034979	REXO2	100	94.515	Cebus_capucinus
ENSCHOG00000000642	-	100	94.937	ENSCATG00000015278	REXO2	100	94.937	Cercocebus_atys
ENSCHOG00000000642	-	100	94.515	ENSCLAG00000011195	REXO2	100	94.515	Chinchilla_lanigera
ENSCHOG00000000642	-	100	94.515	ENSCSAG00000002754	REXO2	100	94.515	Chlorocebus_sabaeus
ENSCHOG00000000642	-	61	87.586	ENSCPBG00000009359	REXO2	100	87.586	Chrysemys_picta_bellii
ENSCHOG00000000642	-	86	53.431	ENSCING00000009858	-	97	53.431	Ciona_intestinalis
ENSCHOG00000000642	-	100	94.937	ENSCANG00000034756	REXO2	100	94.937	Colobus_angolensis_palliatus
ENSCHOG00000000642	-	86	95.122	ENSCGRG00001013673	-	100	95.122	Cricetulus_griseus_chok1gshd
ENSCHOG00000000642	-	100	94.515	ENSCGRG00001019814	-	100	94.515	Cricetulus_griseus_chok1gshd
ENSCHOG00000000642	-	86	94.634	ENSCGRG00001010922	-	100	94.634	Cricetulus_griseus_chok1gshd
ENSCHOG00000000642	-	100	94.515	ENSCGRG00000006235	Rexo2	100	94.515	Cricetulus_griseus_crigri
ENSCHOG00000000642	-	81	80.208	ENSCSEG00000007214	smfn	72	78.392	Cynoglossus_semilaevis
ENSCHOG00000000642	-	77	78.142	ENSCVAG00000012008	smfn	99	78.142	Cyprinodon_variegatus
ENSCHOG00000000642	-	83	79.082	ENSDARG00000009806	smfn	75	78.061	Danio_rerio
ENSCHOG00000000642	-	83	96.429	ENSDNOG00000046533	REXO2	100	95.385	Dasypus_novemcinctus
ENSCHOG00000000642	-	97	71.861	ENSDORG00000025142	-	97	72.174	Dipodomys_ordii
ENSCHOG00000000642	-	100	95.781	ENSDORG00000011255	Rexo2	100	95.781	Dipodomys_ordii
ENSCHOG00000000642	-	87	47.343	FBgn0039115	CG10214	98	47.087	Drosophila_melanogaster
ENSCHOG00000000642	-	80	75.661	ENSEBUG00000013964	REXO2	72	69.767	Eptatretus_burgeri
ENSCHOG00000000642	-	100	94.937	ENSEASG00005006674	REXO2	100	94.937	Equus_asinus_asinus
ENSCHOG00000000642	-	100	94.937	ENSECAG00000005988	REXO2	100	94.937	Equus_caballus
ENSCHOG00000000642	-	84	78.283	ENSELUG00000020072	smfn	69	78.283	Esox_lucius
ENSCHOG00000000642	-	100	95.781	ENSFCAG00000018632	REXO2	100	95.781	Felis_catus
ENSCHOG00000000642	-	85	83.663	ENSFALG00000010044	REXO2	99	83.663	Ficedula_albicollis
ENSCHOG00000000642	-	100	94.937	ENSFDAG00000011764	REXO2	100	94.937	Fukomys_damarensis
ENSCHOG00000000642	-	79	76.596	ENSGMOG00000006370	smfn	94	79.006	Gadus_morhua
ENSCHOG00000000642	-	83	90.355	ENSGALG00000035980	REXO2	99	82.328	Gallus_gallus
ENSCHOG00000000642	-	84	76.000	ENSGAFG00000015349	smfn	70	77.157	Gambusia_affinis
ENSCHOG00000000642	-	80	76.190	ENSGACG00000020096	smfn	87	78.409	Gasterosteus_aculeatus
ENSCHOG00000000642	-	99	81.197	ENSGAGG00000021126	REXO2	97	81.197	Gopherus_agassizii
ENSCHOG00000000642	-	100	94.937	ENSGGOG00000023267	REXO2	100	94.937	Gorilla_gorilla
ENSCHOG00000000642	-	54	74.016	ENSHBUG00000020097	REXO2	62	74.016	Haplochromis_burtoni
ENSCHOG00000000642	-	100	93.249	ENSHGLG00000013556	REXO2	100	93.249	Heterocephalus_glaber_female
ENSCHOG00000000642	-	100	93.671	ENSHGLG00100005257	REXO2	100	93.671	Heterocephalus_glaber_male
ENSCHOG00000000642	-	76	75.556	ENSHCOG00000007122	smfn	93	78.313	Hippocampus_comes
ENSCHOG00000000642	-	92	71.739	ENSIPUG00000020440	rexo2	85	71.739	Ictalurus_punctatus
ENSCHOG00000000642	-	100	95.781	ENSSTOG00000012465	REXO2	100	95.781	Ictidomys_tridecemlineatus
ENSCHOG00000000642	-	100	96.203	ENSJJAG00000013710	-	100	96.203	Jaculus_jaculus
ENSCHOG00000000642	-	100	67.511	ENSJJAG00000022605	-	100	67.511	Jaculus_jaculus
ENSCHOG00000000642	-	93	71.239	ENSKMAG00000016795	smfn	80	69.469	Kryptolebias_marmoratus
ENSCHOG00000000642	-	79	76.720	ENSLBEG00000006021	smfn	100	76.720	Labrus_bergylta
ENSCHOG00000000642	-	94	68.750	ENSLACG00000018623	REXO2	91	68.304	Latimeria_chalumnae
ENSCHOG00000000642	-	87	80.097	ENSLOCG00000002389	smfn	98	80.097	Lepisosteus_oculatus
ENSCHOG00000000642	-	100	92.827	ENSLAFG00000012451	REXO2	100	92.827	Loxodonta_africana
ENSCHOG00000000642	-	100	94.937	ENSMFAG00000041155	REXO2	100	94.937	Macaca_fascicularis
ENSCHOG00000000642	-	100	94.937	ENSMMUG00000012269	REXO2	100	94.937	Macaca_mulatta
ENSCHOG00000000642	-	100	94.937	ENSMNEG00000033379	REXO2	100	94.937	Macaca_nemestrina
ENSCHOG00000000642	-	100	94.937	ENSMLEG00000036571	REXO2	100	94.937	Mandrillus_leucophaeus
ENSCHOG00000000642	-	85	76.733	ENSMAMG00000021209	smfn	73	76.238	Mastacembelus_armatus
ENSCHOG00000000642	-	95	71.875	ENSMZEG00005023224	-	82	71.875	Maylandia_zebra
ENSCHOG00000000642	-	95	71.875	ENSMZEG00005020730	REXO2	82	71.875	Maylandia_zebra
ENSCHOG00000000642	-	68	87.730	ENSMGAG00000003026	REXO2	100	87.730	Meleagris_gallopavo
ENSCHOG00000000642	-	100	94.515	ENSMAUG00000014576	Rexo2	100	94.515	Mesocricetus_auratus
ENSCHOG00000000642	-	100	95.359	ENSMICG00000010094	REXO2	100	95.359	Microcebus_murinus
ENSCHOG00000000642	-	100	94.093	ENSMOCG00000009016	Rexo2	100	94.093	Microtus_ochrogaster
ENSCHOG00000000642	-	81	78.238	ENSMMOG00000006430	smfn	72	78.238	Mola_mola
ENSCHOG00000000642	-	100	89.030	ENSMODG00000013913	REXO2	100	89.030	Monodelphis_domestica
ENSCHOG00000000642	-	85	74.627	ENSMALG00000018130	smfn	57	74.627	Monopterus_albus
ENSCHOG00000000642	-	100	92.405	MGP_CAROLIEiJ_G0032166	Rexo2	100	92.405	Mus_caroli
ENSCHOG00000000642	-	100	92.827	ENSMUSG00000032026	Rexo2	100	92.827	Mus_musculus
ENSCHOG00000000642	-	100	92.827	MGP_PahariEiJ_G0015034	Rexo2	100	92.827	Mus_pahari
ENSCHOG00000000642	-	100	92.827	MGP_SPRETEiJ_G0033305	Rexo2	100	92.827	Mus_spretus
ENSCHOG00000000642	-	100	95.359	ENSMPUG00000003947	REXO2	100	95.359	Mustela_putorius_furo
ENSCHOG00000000642	-	100	94.093	ENSMLUG00000009030	REXO2	100	94.093	Myotis_lucifugus
ENSCHOG00000000642	-	86	97.561	ENSNGAG00000008819	Rexo2	100	97.561	Nannospalax_galili
ENSCHOG00000000642	-	77	78.571	ENSNBRG00000006529	smfn	96	78.571	Neolamprologus_brichardi
ENSCHOG00000000642	-	100	94.937	ENSNLEG00000029745	REXO2	100	94.937	Nomascus_leucogenys
ENSCHOG00000000642	-	92	92.694	ENSMEUG00000011558	REXO2	100	92.694	Notamacropus_eugenii
ENSCHOG00000000642	-	100	71.308	ENSOPRG00000011076	REXO2	100	71.308	Ochotona_princeps
ENSCHOG00000000642	-	79	98.404	ENSODEG00000009750	-	100	98.404	Octodon_degus
ENSCHOG00000000642	-	82	73.333	ENSODEG00000016046	-	98	73.333	Octodon_degus
ENSCHOG00000000642	-	95	73.214	ENSONIG00000001954	smfn	92	73.214	Oreochromis_niloticus
ENSCHOG00000000642	-	88	92.788	ENSOANG00000001754	REXO2	100	85.124	Ornithorhynchus_anatinus
ENSCHOG00000000642	-	100	94.937	ENSOCUG00000004274	REXO2	95	94.937	Oryctolagus_cuniculus
ENSCHOG00000000642	-	87	79.612	ENSORLG00000005119	smfn	67	79.612	Oryzias_latipes
ENSCHOG00000000642	-	87	79.612	ENSORLG00020010121	smfn	67	79.612	Oryzias_latipes_hni
ENSCHOG00000000642	-	87	79.126	ENSORLG00015015699	smfn	66	79.126	Oryzias_latipes_hsok
ENSCHOG00000000642	-	87	75.728	ENSOMEG00000016878	REXO2	75	76.699	Oryzias_melastigma
ENSCHOG00000000642	-	60	74.648	ENSOMEG00000008940	-	99	74.648	Oryzias_melastigma
ENSCHOG00000000642	-	100	95.781	ENSOGAG00000016860	REXO2	100	95.781	Otolemur_garnettii
ENSCHOG00000000642	-	85	97.512	ENSOARG00000001040	REXO2	98	95.694	Ovis_aries
ENSCHOG00000000642	-	100	94.515	ENSPPAG00000039849	REXO2	100	94.515	Pan_paniscus
ENSCHOG00000000642	-	100	95.781	ENSPPRG00000007255	REXO2	100	95.781	Panthera_pardus
ENSCHOG00000000642	-	79	97.872	ENSPTIG00000015578	REXO2	100	97.872	Panthera_tigris_altaica
ENSCHOG00000000642	-	100	94.515	ENSPTRG00000004306	REXO2	100	94.515	Pan_troglodytes
ENSCHOG00000000642	-	100	94.937	ENSPANG00000010675	REXO2	100	94.937	Papio_anubis
ENSCHOG00000000642	-	88	77.404	ENSPKIG00000000911	smfn	77	83.784	Paramormyrops_kingsleyae
ENSCHOG00000000642	-	84	90.500	ENSPSIG00000005151	REXO2	81	84.549	Pelodiscus_sinensis
ENSCHOG00000000642	-	79	79.787	ENSPMGG00000007442	smfn	100	79.787	Periophthalmus_magnuspinnatus
ENSCHOG00000000642	-	100	80.169	ENSPEMG00000001421	Rexo2	100	80.169	Peromyscus_maniculatus_bairdii
ENSCHOG00000000642	-	100	88.186	ENSPCIG00000011227	REXO2	63	88.186	Phascolarctos_cinereus
ENSCHOG00000000642	-	84	78.283	ENSPFOG00000017861	smfn	97	78.680	Poecilia_formosa
ENSCHOG00000000642	-	69	79.141	ENSPLAG00000007327	REXO2	63	79.141	Poecilia_latipinna
ENSCHOG00000000642	-	84	78.283	ENSPMEG00000017343	smfn	71	78.283	Poecilia_mexicana
ENSCHOG00000000642	-	84	77.778	ENSPREG00000016438	smfn	71	77.778	Poecilia_reticulata
ENSCHOG00000000642	-	100	94.937	ENSPPYG00000003895	REXO2	100	94.937	Pongo_abelii
ENSCHOG00000000642	-	100	94.515	ENSPCAG00000005237	REXO2	100	94.515	Procavia_capensis
ENSCHOG00000000642	-	82	94.872	ENSPCOG00000027639	REXO2	100	94.872	Propithecus_coquereli
ENSCHOG00000000642	-	100	84.100	ENSPVAG00000005295	REXO2	100	84.100	Pteropus_vampyrus
ENSCHOG00000000642	-	95	71.429	ENSPNYG00000018401	smfn	82	71.429	Pundamilia_nyererei
ENSCHOG00000000642	-	82	82.051	ENSPNAG00000005290	smfn	75	79.902	Pygocentrus_nattereri
ENSCHOG00000000642	-	100	93.249	ENSRNOG00000018939	Rexo2	100	93.249	Rattus_norvegicus
ENSCHOG00000000642	-	100	94.937	ENSRBIG00000037809	REXO2	100	94.937	Rhinopithecus_bieti
ENSCHOG00000000642	-	100	94.937	ENSRROG00000038928	REXO2	100	94.937	Rhinopithecus_roxellana
ENSCHOG00000000642	-	73	42.308	YLR059C	REX2	67	42.458	Saccharomyces_cerevisiae
ENSCHOG00000000642	-	100	95.781	ENSSBOG00000028651	REXO2	100	95.781	Saimiri_boliviensis_boliviensis
ENSCHOG00000000642	-	99	88.085	ENSSHAG00000008008	REXO2	100	88.085	Sarcophilus_harrisii
ENSCHOG00000000642	-	79	80.214	ENSSFOG00015022414	smfn	99	80.214	Scleropages_formosus
ENSCHOG00000000642	-	98	67.949	ENSSMAG00000003168	smfn	85	67.949	Scophthalmus_maximus
ENSCHOG00000000642	-	85	77.612	ENSSDUG00000015624	smfn	71	77.612	Seriola_dumerili
ENSCHOG00000000642	-	86	78.325	ENSSLDG00000014005	smfn	71	78.325	Seriola_lalandi_dorsalis
ENSCHOG00000000642	-	54	99.213	ENSSARG00000014530	REXO2	100	99.213	Sorex_araneus
ENSCHOG00000000642	-	67	86.164	ENSSPUG00000006005	REXO2	85	86.164	Sphenodon_punctatus
ENSCHOG00000000642	-	76	81.215	ENSSPAG00000001530	smfn	97	81.215	Stegastes_partitus
ENSCHOG00000000642	-	100	94.937	ENSSSCG00000015056	REXO2	100	94.937	Sus_scrofa
ENSCHOG00000000642	-	84	86.935	ENSTGUG00000000121	REXO2	99	78.333	Taeniopygia_guttata
ENSCHOG00000000642	-	95	68.304	ENSTRUG00000021529	smfn	82	67.857	Takifugu_rubripes
ENSCHOG00000000642	-	80	80.000	ENSTNIG00000008588	smfn	97	71.364	Tetraodon_nigroviridis
ENSCHOG00000000642	-	100	95.359	ENSTBEG00000017040	REXO2	100	95.359	Tupaia_belangeri
ENSCHOG00000000642	-	100	93.249	ENSTTRG00000014928	REXO2	100	93.249	Tursiops_truncatus
ENSCHOG00000000642	-	100	88.608	ENSUAMG00000019096	REXO2	100	95.385	Ursus_americanus
ENSCHOG00000000642	-	100	95.781	ENSUMAG00000003770	REXO2	100	95.781	Ursus_maritimus
ENSCHOG00000000642	-	79	77.128	ENSVPAG00000006301	REXO2	100	77.128	Vicugna_pacos
ENSCHOG00000000642	-	100	95.781	ENSVVUG00000025223	REXO2	100	95.781	Vulpes_vulpes
ENSCHOG00000000642	-	84	85.427	ENSXETG00000012648	rexo2	96	75.641	Xenopus_tropicalis
ENSCHOG00000000642	-	95	66.087	ENSXCOG00000018838	smfn	95	76.344	Xiphophorus_couchianus
ENSCHOG00000000642	-	84	75.000	ENSXMAG00000021125	smfn	64	75.000	Xiphophorus_maculatus