EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCHOG00000000918 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Choloepus_hoffmanni
Status
putative
Strand
Minus strand
Length
23314 bases
Position
chrGeneScaffold_115:1128-24441
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHOP00000000814CSDPF00313.225.9e-6714
ENSCHOP00000000814CSDPF00313.225.9e-6724
ENSCHOP00000000814CSDPF00313.225.9e-6734
ENSCHOP00000000814CSDPF00313.225.9e-6744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHOT00000000921CSDE1-2012280-ENSCHOP00000000814759 (aa)-UPI0001F9E23E
Gene Model
Click here to download ENSCHOG00000000918's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000000918's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHOG00000000918CSDE19199.387ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCHOG00000000918CSDE18980.488ENSAPOG00000015538csde110082.524Acanthochromis_polyacanthus
ENSCHOG00000000918CSDE19590.373ENSAMEG00000017129CSDE110090.373Ailuropoda_melanoleuca
ENSCHOG00000000918CSDE18980.488ENSAOCG00000011510csde19683.178Amphiprion_ocellaris
ENSCHOG00000000918CSDE18980.488ENSAPEG00000007194csde110083.495Amphiprion_percula
ENSCHOG00000000918CSDE18975.431ENSATEG00000003864csde110075.431Anabas_testudineus
ENSCHOG00000000918CSDE18987.229ENSAPLG00000008797CSDE110087.229Anas_platyrhynchos
ENSCHOG00000000918CSDE18593.252ENSACAG00000003120CSDE110093.252Anolis_carolinensis
ENSCHOG00000000918CSDE19198.773ENSANAG00000024665CSDE110098.773Aotus_nancymaae
ENSCHOG00000000918CSDE18582.524ENSACLG00000013296csde110082.524Astatotilapia_calliptera
ENSCHOG00000000918CSDE18175.817ENSAMXG00000007436csde19375.817Astyanax_mexicanus
ENSCHOG00000000918CSDE19198.466ENSBTAG00000000678CSDE110098.466Bos_taurus
ENSCHOG00000000918CSDE19199.080ENSCJAG00000012565CSDE110099.080Callithrix_jacchus
ENSCHOG00000000918CSDE187100.000ENSCAFG00000009618CSDE194100.000Canis_familiaris
ENSCHOG00000000918CSDE18991.342ENSCAFG00020000481CSDE110091.342Canis_lupus_dingo
ENSCHOG00000000918CSDE19198.466ENSCHIG00000017250CSDE110098.466Capra_hircus
ENSCHOG00000000918CSDE19198.773ENSTSYG00000003747CSDE110098.773Carlito_syrichta
ENSCHOG00000000918CSDE18978.280ENSCAPG00000015128CSDE19878.280Cavia_aperea
ENSCHOG00000000918CSDE18396.970ENSCPOG00000040388CSDE110096.970Cavia_porcellus
ENSCHOG00000000918CSDE19199.080ENSCCAG00000036794CSDE110099.080Cebus_capucinus
ENSCHOG00000000918CSDE16180.132ENSCCAG00000033677-9379.470Cebus_capucinus
ENSCHOG00000000918CSDE15976.510ENSCCAG00000030878-8276.510Cebus_capucinus
ENSCHOG00000000918CSDE19199.387ENSCATG00000036962CSDE110099.387Cercocebus_atys
ENSCHOG00000000918CSDE18598.466ENSCLAG00000006618CSDE110098.466Chinchilla_lanigera
ENSCHOG00000000918CSDE19199.387ENSCSAG00000001658CSDE110099.387Chlorocebus_sabaeus
ENSCHOG00000000918CSDE18597.087ENSCPBG00000016547CSDE110097.087Chrysemys_picta_bellii
ENSCHOG00000000918CSDE17452.128ENSCING00000014465-9052.128Ciona_intestinalis
ENSCHOG00000000918CSDE18452.632ENSCSAVG00000008100-9552.632Ciona_savignyi
ENSCHOG00000000918CSDE15595.652ENSCANG00000031069-9296.121Colobus_angolensis_palliatus
ENSCHOG00000000918CSDE19199.387ENSCANG00000035096CSDE110099.387Colobus_angolensis_palliatus
ENSCHOG00000000918CSDE18599.387ENSCGRG00001016833-10099.387Cricetulus_griseus_chok1gshd
ENSCHOG00000000918CSDE18872.885ENSCGRG00001014011-10072.885Cricetulus_griseus_chok1gshd
ENSCHOG00000000918CSDE16998.611ENSCGRG00000002225-10098.611Cricetulus_griseus_crigri
ENSCHOG00000000918CSDE18871.368ENSCGRG00000005831-10071.368Cricetulus_griseus_crigri
ENSCHOG00000000918CSDE18977.946ENSCSEG00000002620csde19582.243Cynoglossus_semilaevis
ENSCHOG00000000918CSDE19078.916ENSCVAG00000001344csde110082.524Cyprinodon_variegatus
ENSCHOG00000000918CSDE18585.437ENSDARG00000074758csde110089.362Danio_rerio
ENSCHOG00000000918CSDE18646.532ENSDNOG00000034464-10046.532Dasypus_novemcinctus
ENSCHOG00000000918CSDE18990.150ENSDNOG00000010287-9490.150Dasypus_novemcinctus
ENSCHOG00000000918CSDE18598.466ENSDORG00000011609Csde110098.466Dipodomys_ordii
ENSCHOG00000000918CSDE18167.089FBgn0263352Unr7065.060Drosophila_melanogaster
ENSCHOG00000000918CSDE18874.286ENSETEG00000013678-9774.286Echinops_telfairi
ENSCHOG00000000918CSDE18198.347ENSETEG00000002491-7898.347Echinops_telfairi
ENSCHOG00000000918CSDE17083.589ENSETEG00000006280-9783.589Echinops_telfairi
ENSCHOG00000000918CSDE15870.934ENSETEG00000007109-7470.934Echinops_telfairi
ENSCHOG00000000918CSDE17558.683ENSEBUG00000008647csde19157.237Eptatretus_burgeri
ENSCHOG00000000918CSDE19588.780ENSEASG00005006284CSDE110098.773Equus_asinus_asinus
ENSCHOG00000000918CSDE18999.298ENSECAG00000020885CSDE110099.298Equus_caballus
ENSCHOG00000000918CSDE187100.000ENSEEUG00000006286CSDE174100.000Erinaceus_europaeus
ENSCHOG00000000918CSDE18980.000ENSELUG00000015507csde19683.178Esox_lucius
ENSCHOG00000000918CSDE19199.080ENSFCAG00000029266CSDE110099.080Felis_catus
ENSCHOG00000000918CSDE18596.117ENSFALG00000003407CSDE110096.117Ficedula_albicollis
ENSCHOG00000000918CSDE18599.080ENSFDAG00000007882CSDE110099.080Fukomys_damarensis
ENSCHOG00000000918CSDE18979.341ENSFHEG00000010799csde110082.524Fundulus_heteroclitus
ENSCHOG00000000918CSDE17781.553ENSGMOG00000012731csde110081.553Gadus_morhua
ENSCHOG00000000918CSDE17796.117ENSGALG00000002139CSDE19396.117Gallus_gallus
ENSCHOG00000000918CSDE17475.647ENSGAFG00000005241csde19575.647Gambusia_affinis
ENSCHOG00000000918CSDE18482.524ENSGACG00000004544csde110082.524Gasterosteus_aculeatus
ENSCHOG00000000918CSDE19192.945ENSGAGG00000017685CSDE110097.087Gopherus_agassizii
ENSCHOG00000000918CSDE19199.387ENSGGOG00000002164CSDE110099.387Gorilla_gorilla
ENSCHOG00000000918CSDE18981.040ENSHBUG00000020315csde110082.524Haplochromis_burtoni
ENSCHOG00000000918CSDE18599.387ENSHGLG00000009620-9799.387Heterocephalus_glaber_female
ENSCHOG00000000918CSDE19486.408ENSHGLG00000000650-9986.408Heterocephalus_glaber_female
ENSCHOG00000000918CSDE18987.379ENSHGLG00000019549-10087.379Heterocephalus_glaber_female
ENSCHOG00000000918CSDE18287.730ENSHGLG00000008555-9587.730Heterocephalus_glaber_female
ENSCHOG00000000918CSDE18984.199ENSHGLG00000003829-10084.199Heterocephalus_glaber_female
ENSCHOG00000000918CSDE18672.190ENSHGLG00000007471-9272.190Heterocephalus_glaber_female
ENSCHOG00000000918CSDE15897.761ENSHGLG00000010039-8697.761Heterocephalus_glaber_female
ENSCHOG00000000918CSDE18979.221ENSHGLG00100012072-10083.861Heterocephalus_glaber_male
ENSCHOG00000000918CSDE15897.761ENSHGLG00100006910-8697.761Heterocephalus_glaber_male
ENSCHOG00000000918CSDE17994.928ENSHGLG00100007287-8794.928Heterocephalus_glaber_male
ENSCHOG00000000918CSDE18599.387ENSHGLG00100019438-10099.387Heterocephalus_glaber_male
ENSCHOG00000000918CSDE18192.617ENSHGLG00100001846-9692.617Heterocephalus_glaber_male
ENSCHOG00000000918CSDE17593.464ENSHGLG00100004195-9293.464Heterocephalus_glaber_male
ENSCHOG00000000918CSDE18986.408ENSHGLG00100002245-9986.408Heterocephalus_glaber_male
ENSCHOG00000000918CSDE16988.889ENSHGLG00100004833-10088.889Heterocephalus_glaber_male
ENSCHOG00000000918CSDE18880.122ENSHCOG00000004158csde19581.308Hippocampus_comes
ENSCHOG00000000918CSDE18974.034ENSIPUG00000000355csde110074.034Ictalurus_punctatus
ENSCHOG00000000918CSDE18475.208ENSSTOG00000032722-9875.208Ictidomys_tridecemlineatus
ENSCHOG00000000918CSDE18969.811ENSSTOG00000030994-10069.811Ictidomys_tridecemlineatus
ENSCHOG00000000918CSDE18597.853ENSJJAG00000019571Csde110097.853Jaculus_jaculus
ENSCHOG00000000918CSDE19081.707ENSKMAG00000005685csde110081.553Kryptolebias_marmoratus
ENSCHOG00000000918CSDE18981.098ENSLBEG00000014770csde19681.308Labrus_bergylta
ENSCHOG00000000918CSDE18787.117ENSLACG00000018452CSDE19687.117Latimeria_chalumnae
ENSCHOG00000000918CSDE19182.263ENSLOCG00000010413csde19688.034Lepisosteus_oculatus
ENSCHOG00000000918CSDE18990.343ENSLAFG00000007150CSDE19690.343Loxodonta_africana
ENSCHOG00000000918CSDE19199.387ENSMFAG00000003674CSDE110099.387Macaca_fascicularis
ENSCHOG00000000918CSDE19199.387ENSMMUG00000001974CSDE110099.387Macaca_mulatta
ENSCHOG00000000918CSDE19199.387ENSMNEG00000045247CSDE110099.387Macaca_nemestrina
ENSCHOG00000000918CSDE19199.387ENSMLEG00000038673CSDE110099.387Mandrillus_leucophaeus
ENSCHOG00000000918CSDE18980.793ENSMAMG00000008821csde19683.178Mastacembelus_armatus
ENSCHOG00000000918CSDE18981.040ENSMZEG00005021675csde19682.243Maylandia_zebra
ENSCHOG00000000918CSDE18987.013ENSMGAG00000016381CSDE19397.087Meleagris_gallopavo
ENSCHOG00000000918CSDE18599.387ENSMAUG00000014031Csde110099.387Mesocricetus_auratus
ENSCHOG00000000918CSDE19197.239ENSMICG00000002050CSDE110097.239Microcebus_murinus
ENSCHOG00000000918CSDE18599.387ENSMOCG00000018960Csde110099.387Microtus_ochrogaster
ENSCHOG00000000918CSDE18975.862ENSMMOG00000015075csde110075.862Mola_mola
ENSCHOG00000000918CSDE18597.087ENSMODG00000004685CSDE19997.087Monodelphis_domestica
ENSCHOG00000000918CSDE18975.000ENSMALG00000007132csde110075.000Monopterus_albus
ENSCHOG00000000918CSDE18599.387MGP_CAROLIEiJ_G0025444Csde110099.387Mus_caroli
ENSCHOG00000000918CSDE18599.387ENSMUSG00000068823Csde110099.387Mus_musculus
ENSCHOG00000000918CSDE18599.387MGP_PahariEiJ_G0026888Csde110099.387Mus_pahari
ENSCHOG00000000918CSDE18599.387MGP_SPRETEiJ_G0026394Csde110099.387Mus_spretus
ENSCHOG00000000918CSDE177100.000ENSMPUG00000005753CSDE194100.000Mustela_putorius_furo
ENSCHOG00000000918CSDE19589.961ENSMLUG00000005681CSDE110089.961Myotis_lucifugus
ENSCHOG00000000918CSDE17771.242ENSNGAG00000012599-8571.242Nannospalax_galili
ENSCHOG00000000918CSDE18599.080ENSNGAG00000021929Csde110099.080Nannospalax_galili
ENSCHOG00000000918CSDE18975.594ENSNBRG00000020808csde110075.594Neolamprologus_brichardi
ENSCHOG00000000918CSDE19199.080ENSNLEG00000004842CSDE110099.080Nomascus_leucogenys
ENSCHOG00000000918CSDE18199.346ENSMEUG00000002677CSDE19399.346Notamacropus_eugenii
ENSCHOG00000000918CSDE187100.000ENSOPRG00000005002CSDE182100.000Ochotona_princeps
ENSCHOG00000000918CSDE18597.853ENSODEG00000007383-10097.853Octodon_degus
ENSCHOG00000000918CSDE17448.551ENSODEG00000005979-9876.871Octodon_degus
ENSCHOG00000000918CSDE18582.524ENSONIG00000009309csde110082.524Oreochromis_niloticus
ENSCHOG00000000918CSDE15797.087ENSOANG00000003346-7397.087Ornithorhynchus_anatinus
ENSCHOG00000000918CSDE19198.160ENSOCUG00000016438CSDE110098.160Oryctolagus_cuniculus
ENSCHOG00000000918CSDE18582.524ENSORLG00000000707csde110082.524Oryzias_latipes
ENSCHOG00000000918CSDE18980.122ENSORLG00020005148csde110082.524Oryzias_latipes_hni
ENSCHOG00000000918CSDE18980.122ENSORLG00015019415csde110082.524Oryzias_latipes_hsok
ENSCHOG00000000918CSDE18980.488ENSOMEG00000015656csde110082.524Oryzias_melastigma
ENSCHOG00000000918CSDE19590.945ENSOGAG00000012127CSDE110090.945Otolemur_garnettii
ENSCHOG00000000918CSDE19591.142ENSOARG00000020034CSDE110091.142Ovis_aries
ENSCHOG00000000918CSDE19199.387ENSPPAG00000025861CSDE110099.387Pan_paniscus
ENSCHOG00000000918CSDE19199.080ENSPPRG00000006747CSDE110099.080Panthera_pardus
ENSCHOG00000000918CSDE19199.080ENSPTIG00000015468CSDE110099.080Panthera_tigris_altaica
ENSCHOG00000000918CSDE19199.387ENSPTRG00000033721CSDE110099.387Pan_troglodytes
ENSCHOG00000000918CSDE19199.387ENSPANG00000018873CSDE110099.387Papio_anubis
ENSCHOG00000000918CSDE19473.707ENSPKIG00000009459csde110073.707Paramormyrops_kingsleyae
ENSCHOG00000000918CSDE15797.087ENSPSIG00000003823CSDE19697.087Pelodiscus_sinensis
ENSCHOG00000000918CSDE18975.216ENSPMGG00000000772csde110075.216Periophthalmus_magnuspinnatus
ENSCHOG00000000918CSDE18599.387ENSPEMG00000020357-10099.387Peromyscus_maniculatus_bairdii
ENSCHOG00000000918CSDE19195.092ENSPCIG00000022587CSDE19997.087Phascolarctos_cinereus
ENSCHOG00000000918CSDE17179.217ENSPFOG00000012664csde19979.819Poecilia_formosa
ENSCHOG00000000918CSDE16371.242ENSPLAG00000017680csde18771.242Poecilia_latipinna
ENSCHOG00000000918CSDE18071.242ENSPMEG00000005094csde18871.242Poecilia_mexicana
ENSCHOG00000000918CSDE18978.916ENSPREG00000011631csde110082.524Poecilia_reticulata
ENSCHOG00000000918CSDE18599.080ENSPPYG00000000996CSDE110099.080Pongo_abelii
ENSCHOG00000000918CSDE19597.638ENSPCAG00000014368CSDE110097.638Procavia_capensis
ENSCHOG00000000918CSDE186100.000ENSPCOG00000017893CSDE199100.000Propithecus_coquereli
ENSCHOG00000000918CSDE15487.069ENSPCOG00000008223-8587.069Propithecus_coquereli
ENSCHOG00000000918CSDE195100.000ENSPVAG00000008225CSDE1100100.000Pteropus_vampyrus
ENSCHOG00000000918CSDE18979.456ENSPNYG00000013745csde110082.524Pundamilia_nyererei
ENSCHOG00000000918CSDE18181.155ENSPNAG00000001958csde18982.243Pygocentrus_nattereri
ENSCHOG00000000918CSDE18599.080ENSRNOG00000061058Csde110099.080Rattus_norvegicus
ENSCHOG00000000918CSDE18592.945ENSRBIG00000038088-9997.674Rhinopithecus_bieti
ENSCHOG00000000918CSDE19193.289ENSRBIG00000038966-10093.289Rhinopithecus_bieti
ENSCHOG00000000918CSDE19199.387ENSRROG00000043101CSDE110099.387Rhinopithecus_roxellana
ENSCHOG00000000918CSDE19199.080ENSSBOG00000035592CSDE110099.080Saimiri_boliviensis_boliviensis
ENSCHOG00000000918CSDE19586.106ENSSHAG00000009831CSDE19988.745Sarcophilus_harrisii
ENSCHOG00000000918CSDE18880.183ENSSFOG00015007498csde19580.183Scleropages_formosus
ENSCHOG00000000918CSDE19080.793ENSSMAG00000007203csde110082.524Scophthalmus_maximus
ENSCHOG00000000918CSDE18980.793ENSSDUG00000015380csde19682.243Seriola_dumerili
ENSCHOG00000000918CSDE18980.793ENSSLDG00000008819csde110082.524Seriola_lalandi_dorsalis
ENSCHOG00000000918CSDE19490.079ENSSARG00000000738CSDE110090.079Sorex_araneus
ENSCHOG00000000918CSDE18597.087ENSSPUG00000008714CSDE110097.087Sphenodon_punctatus
ENSCHOG00000000918CSDE19080.793ENSSPAG00000000716csde19683.178Stegastes_partitus
ENSCHOG00000000918CSDE19199.387ENSSSCG00000006752CSDE110099.387Sus_scrofa
ENSCHOG00000000918CSDE18596.117ENSTGUG00000000972CSDE110096.117Taeniopygia_guttata
ENSCHOG00000000918CSDE18973.491ENSTRUG00000007996csde110073.491Takifugu_rubripes
ENSCHOG00000000918CSDE15789.583ENSTNIG00000010878csde110089.583Tetraodon_nigroviridis
ENSCHOG00000000918CSDE172100.000ENSTBEG00000011880-52100.000Tupaia_belangeri
ENSCHOG00000000918CSDE19590.551ENSTTRG00000015583CSDE110090.551Tursiops_truncatus
ENSCHOG00000000918CSDE17092.913ENSUAMG00000024289-9992.913Ursus_americanus
ENSCHOG00000000918CSDE16998.276ENSUMAG00000011714-9998.276Ursus_maritimus
ENSCHOG00000000918CSDE19282.680ENSUMAG00000009720-9884.979Ursus_maritimus
ENSCHOG00000000918CSDE19190.295ENSVPAG00000000749CSDE18590.295Vicugna_pacos
ENSCHOG00000000918CSDE170100.000ENSVVUG00000009890CSDE192100.000Vulpes_vulpes
ENSCHOG00000000918CSDE18594.175ENSXETG00000021448csde110094.175Xenopus_tropicalis
ENSCHOG00000000918CSDE16885.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSCHOG00000000918CSDE19080.793ENSXMAG00000009080csde110082.524Xiphophorus_maculatus

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