EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000001198 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 2717 bases
Position: chrscaffold_24902:6403-9119
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000001059	AD	PF09793.9	1.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000001201	LSM12-201	327	-	ENSCHOP00000001059	108 (aa)	-	UPI0001F9E333

Gene Model

Click here to download ENSCHOG00000001198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000001198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000001198	LSM12	100	99.083	ENSG00000161654	LSM12	56	99.083	Homo_sapiens
ENSCHOG00000001198	LSM12	100	86.239	ENSAPOG00000007907	lsm12b	56	86.239	Acanthochromis_polyacanthus
ENSCHOG00000001198	LSM12	100	99.083	ENSAMEG00000018321	LSM12	55	99.083	Ailuropoda_melanoleuca
ENSCHOG00000001198	LSM12	100	85.321	ENSACIG00000008538	lsm12b	56	85.321	Amphilophus_citrinellus
ENSCHOG00000001198	LSM12	100	86.239	ENSAPEG00000002252	lsm12b	56	86.239	Amphiprion_percula
ENSCHOG00000001198	LSM12	100	85.321	ENSATEG00000005705	lsm12b	56	85.321	Anabas_testudineus
ENSCHOG00000001198	LSM12	100	90.826	ENSACAG00000004618	LSM12	56	90.826	Anolis_carolinensis
ENSCHOG00000001198	LSM12	100	99.083	ENSANAG00000029011	LSM12	80	99.083	Aotus_nancymaae
ENSCHOG00000001198	LSM12	100	85.321	ENSACLG00000026332	lsm12b	56	85.321	Astatotilapia_calliptera
ENSCHOG00000001198	LSM12	100	82.569	ENSAMXG00000036117	lsm12a	51	82.569	Astyanax_mexicanus
ENSCHOG00000001198	LSM12	100	85.321	ENSAMXG00000032952	lsm12b	56	85.321	Astyanax_mexicanus
ENSCHOG00000001198	LSM12	100	99.083	ENSBTAG00000016252	LSM12	56	99.083	Bos_taurus
ENSCHOG00000001198	LSM12	100	99.083	ENSCJAG00000048480	LSM12	80	99.083	Callithrix_jacchus
ENSCHOG00000001198	LSM12	100	99.083	ENSCAFG00000014379	LSM12	51	99.083	Canis_familiaris
ENSCHOG00000001198	LSM12	100	99.083	ENSCAFG00020012173	LSM12	56	99.083	Canis_lupus_dingo
ENSCHOG00000001198	LSM12	100	99.083	ENSCHIG00000018175	LSM12	56	99.083	Capra_hircus
ENSCHOG00000001198	LSM12	100	99.083	ENSTSYG00000036361	LSM12	56	99.083	Carlito_syrichta
ENSCHOG00000001198	LSM12	100	97.248	ENSCAPG00000009647	LSM12	60	97.248	Cavia_aperea
ENSCHOG00000001198	LSM12	100	97.248	ENSCPOG00000012860	LSM12	80	97.248	Cavia_porcellus
ENSCHOG00000001198	LSM12	100	99.083	ENSCCAG00000032905	LSM12	80	99.083	Cebus_capucinus
ENSCHOG00000001198	LSM12	100	99.083	ENSCATG00000030577	-	80	99.083	Cercocebus_atys
ENSCHOG00000001198	LSM12	100	97.248	ENSCLAG00000015759	LSM12	80	97.248	Chinchilla_lanigera
ENSCHOG00000001198	LSM12	100	98.165	ENSCSAG00000003486	LSM12	56	98.165	Chlorocebus_sabaeus
ENSCHOG00000001198	LSM12	100	89.908	ENSCPBG00000027105	LSM12	56	89.908	Chrysemys_picta_bellii
ENSCHOG00000001198	LSM12	100	99.083	ENSCANG00000043328	LSM12	80	99.083	Colobus_angolensis_palliatus
ENSCHOG00000001198	LSM12	100	99.083	ENSCGRG00001002094	Lsm12	80	99.083	Cricetulus_griseus_chok1gshd
ENSCHOG00000001198	LSM12	100	99.083	ENSCGRG00000004316	Lsm12	62	99.083	Cricetulus_griseus_crigri
ENSCHOG00000001198	LSM12	100	84.404	ENSCSEG00000008434	lsm12b	56	84.404	Cynoglossus_semilaevis
ENSCHOG00000001198	LSM12	100	85.321	ENSCVAG00000008755	lsm12b	56	85.321	Cyprinodon_variegatus
ENSCHOG00000001198	LSM12	100	85.321	ENSDARG00000109510	lsm12b	56	85.321	Danio_rerio
ENSCHOG00000001198	LSM12	100	76.147	ENSDARG00000028848	lsm12a	56	76.147	Danio_rerio
ENSCHOG00000001198	LSM12	100	98.165	ENSDNOG00000002418	LSM12	51	98.165	Dasypus_novemcinctus
ENSCHOG00000001198	LSM12	100	99.083	ENSDORG00000016381	Lsm12	80	99.083	Dipodomys_ordii
ENSCHOG00000001198	LSM12	100	99.083	ENSETEG00000008374	LSM12	56	99.083	Echinops_telfairi
ENSCHOG00000001198	LSM12	100	88.073	ENSETEG00000011012	-	62	88.073	Echinops_telfairi
ENSCHOG00000001198	LSM12	100	99.083	ENSEASG00005010155	LSM12	56	99.083	Equus_asinus_asinus
ENSCHOG00000001198	LSM12	100	99.083	ENSECAG00000009071	LSM12	80	99.083	Equus_caballus
ENSCHOG00000001198	LSM12	100	97.248	ENSEEUG00000002419	-	71	97.248	Erinaceus_europaeus
ENSCHOG00000001198	LSM12	100	84.404	ENSELUG00000015538	lsm12b	51	84.404	Esox_lucius
ENSCHOG00000001198	LSM12	100	83.486	ENSELUG00000000256	-	56	83.486	Esox_lucius
ENSCHOG00000001198	LSM12	100	99.083	ENSFCAG00000037021	LSM12	56	99.083	Felis_catus
ENSCHOG00000001198	LSM12	100	98.165	ENSFDAG00000008954	LSM12	64	98.165	Fukomys_damarensis
ENSCHOG00000001198	LSM12	100	84.404	ENSFHEG00000019913	lsm12b	56	84.404	Fundulus_heteroclitus
ENSCHOG00000001198	LSM12	100	85.321	ENSGMOG00000015449	lsm12b	69	85.321	Gadus_morhua
ENSCHOG00000001198	LSM12	100	91.743	ENSGALG00000039803	LSM12	71	91.743	Gallus_gallus
ENSCHOG00000001198	LSM12	100	85.321	ENSGAFG00000011829	lsm12b	56	85.321	Gambusia_affinis
ENSCHOG00000001198	LSM12	100	85.321	ENSGACG00000003428	lsm12b	69	85.321	Gasterosteus_aculeatus
ENSCHOG00000001198	LSM12	100	91.743	ENSGAGG00000021965	LSM12	56	91.743	Gopherus_agassizii
ENSCHOG00000001198	LSM12	100	99.083	ENSGGOG00000010589	-	80	99.083	Gorilla_gorilla
ENSCHOG00000001198	LSM12	100	99.083	ENSHGLG00000011411	LSM12	80	99.083	Heterocephalus_glaber_female
ENSCHOG00000001198	LSM12	100	99.083	ENSHGLG00100000241	LSM12	58	99.083	Heterocephalus_glaber_male
ENSCHOG00000001198	LSM12	100	83.486	ENSHCOG00000002094	lsm12b	56	83.486	Hippocampus_comes
ENSCHOG00000001198	LSM12	100	85.321	ENSIPUG00000014800	lsm12	56	85.321	Ictalurus_punctatus
ENSCHOG00000001198	LSM12	98	77.570	ENSIPUG00000008936	lsm12a	54	77.570	Ictalurus_punctatus
ENSCHOG00000001198	LSM12	100	99.083	ENSSTOG00000007403	LSM12	80	99.083	Ictidomys_tridecemlineatus
ENSCHOG00000001198	LSM12	100	98.165	ENSJJAG00000004364	-	80	98.165	Jaculus_jaculus
ENSCHOG00000001198	LSM12	100	84.545	ENSJJAG00000011793	-	56	84.545	Jaculus_jaculus
ENSCHOG00000001198	LSM12	100	86.239	ENSLBEG00000027999	lsm12b	56	86.239	Labrus_bergylta
ENSCHOG00000001198	LSM12	100	90.826	ENSLACG00000015981	LSM12	56	90.826	Latimeria_chalumnae
ENSCHOG00000001198	LSM12	100	87.156	ENSLOCG00000013079	lsm12b	55	87.156	Lepisosteus_oculatus
ENSCHOG00000001198	LSM12	100	99.083	ENSLAFG00000005202	LSM12	56	99.083	Loxodonta_africana
ENSCHOG00000001198	LSM12	100	99.083	ENSMFAG00000031376	LSM12	80	99.083	Macaca_fascicularis
ENSCHOG00000001198	LSM12	100	99.083	ENSMMUG00000006804	LSM12	80	99.083	Macaca_mulatta
ENSCHOG00000001198	LSM12	80	85.057	ENSMMUG00000042106	-	79	85.057	Macaca_mulatta
ENSCHOG00000001198	LSM12	80	85.057	ENSMMUG00000038408	-	79	85.057	Macaca_mulatta
ENSCHOG00000001198	LSM12	100	99.083	ENSMNEG00000030594	-	80	99.083	Macaca_nemestrina
ENSCHOG00000001198	LSM12	100	99.083	ENSMLEG00000039934	LSM12	80	99.083	Mandrillus_leucophaeus
ENSCHOG00000001198	LSM12	100	86.239	ENSMAMG00000004279	lsm12b	56	86.239	Mastacembelus_armatus
ENSCHOG00000001198	LSM12	100	85.321	ENSMZEG00005005754	lsm12b	56	85.321	Maylandia_zebra
ENSCHOG00000001198	LSM12	100	98.165	ENSMICG00000037219	LSM12	80	98.165	Microcebus_murinus
ENSCHOG00000001198	LSM12	100	99.083	ENSMOCG00000019878	-	80	99.083	Microtus_ochrogaster
ENSCHOG00000001198	LSM12	100	86.239	ENSMMOG00000020848	lsm12b	56	86.239	Mola_mola
ENSCHOG00000001198	LSM12	100	86.239	ENSMALG00000007578	lsm12b	56	86.239	Monopterus_albus
ENSCHOG00000001198	LSM12	100	98.165	MGP_CAROLIEiJ_G0017241	Lsm12	80	98.165	Mus_caroli
ENSCHOG00000001198	LSM12	100	99.083	ENSMUSG00000020922	Lsm12	80	99.083	Mus_musculus
ENSCHOG00000001198	LSM12	100	99.083	MGP_PahariEiJ_G0018371	Lsm12	80	99.083	Mus_pahari
ENSCHOG00000001198	LSM12	99	99.074	MGP_SPRETEiJ_G0018084	Lsm12	79	99.074	Mus_spretus
ENSCHOG00000001198	LSM12	100	98.165	ENSMLUG00000006391	LSM12	56	98.165	Myotis_lucifugus
ENSCHOG00000001198	LSM12	100	81.481	ENSNGAG00000015429	-	54	81.481	Nannospalax_galili
ENSCHOG00000001198	LSM12	100	99.083	ENSNGAG00000001870	Lsm12	80	99.083	Nannospalax_galili
ENSCHOG00000001198	LSM12	100	85.321	ENSNBRG00000006266	lsm12b	56	85.321	Neolamprologus_brichardi
ENSCHOG00000001198	LSM12	100	99.083	ENSNLEG00000005580	-	80	99.083	Nomascus_leucogenys
ENSCHOG00000001198	LSM12	100	99.083	ENSOPRG00000008552	LSM12	56	99.083	Ochotona_princeps
ENSCHOG00000001198	LSM12	100	97.248	ENSODEG00000017998	-	80	97.248	Octodon_degus
ENSCHOG00000001198	LSM12	100	85.321	ENSONIG00000007933	lsm12b	56	85.321	Oreochromis_niloticus
ENSCHOG00000001198	LSM12	68	97.260	ENSOANG00000031724	-	90	97.260	Ornithorhynchus_anatinus
ENSCHOG00000001198	LSM12	100	99.083	ENSOCUG00000008566	-	55	99.083	Oryctolagus_cuniculus
ENSCHOG00000001198	LSM12	99	92.593	ENSOCUG00000021254	-	56	92.593	Oryctolagus_cuniculus
ENSCHOG00000001198	LSM12	99	94.444	ENSOCUG00000027889	-	56	94.444	Oryctolagus_cuniculus
ENSCHOG00000001198	LSM12	99	92.593	ENSOCUG00000024823	-	56	92.593	Oryctolagus_cuniculus
ENSCHOG00000001198	LSM12	100	84.404	ENSORLG00000011310	lsm12b	56	84.404	Oryzias_latipes
ENSCHOG00000001198	LSM12	100	84.404	ENSORLG00020002060	lsm12b	51	84.404	Oryzias_latipes_hni
ENSCHOG00000001198	LSM12	100	84.404	ENSORLG00015001647	lsm12b	51	84.404	Oryzias_latipes_hsok
ENSCHOG00000001198	LSM12	100	85.321	ENSOMEG00000006184	lsm12b	51	85.321	Oryzias_melastigma
ENSCHOG00000001198	LSM12	100	98.165	ENSOGAG00000010489	LSM12	56	98.165	Otolemur_garnettii
ENSCHOG00000001198	LSM12	100	99.083	ENSOARG00000006589	LSM12	54	99.083	Ovis_aries
ENSCHOG00000001198	LSM12	100	99.083	ENSPPAG00000034974	-	77	99.083	Pan_paniscus
ENSCHOG00000001198	LSM12	100	99.083	ENSPPRG00000023420	LSM12	56	99.083	Panthera_pardus
ENSCHOG00000001198	LSM12	100	97.248	ENSPTIG00000014850	-	79	97.248	Panthera_tigris_altaica
ENSCHOG00000001198	LSM12	100	99.083	ENSPTIG00000012704	-	58	99.083	Panthera_tigris_altaica
ENSCHOG00000001198	LSM12	100	99.083	ENSPTRG00000009261	LSM12	80	99.083	Pan_troglodytes
ENSCHOG00000001198	LSM12	100	99.083	ENSPANG00000021315	-	80	99.083	Papio_anubis
ENSCHOG00000001198	LSM12	100	75.229	ENSPKIG00000017932	-	56	75.229	Paramormyrops_kingsleyae
ENSCHOG00000001198	LSM12	100	86.239	ENSPKIG00000021058	lsm12b	56	86.239	Paramormyrops_kingsleyae
ENSCHOG00000001198	LSM12	100	85.321	ENSPMGG00000021344	lsm12b	56	85.321	Periophthalmus_magnuspinnatus
ENSCHOG00000001198	LSM12	100	99.083	ENSPEMG00000012199	Lsm12	80	99.083	Peromyscus_maniculatus_bairdii
ENSCHOG00000001198	LSM12	81	70.455	ENSPMAG00000005461	lsm12a	51	70.455	Petromyzon_marinus
ENSCHOG00000001198	LSM12	100	95.413	ENSPCIG00000020244	LSM12	56	95.413	Phascolarctos_cinereus
ENSCHOG00000001198	LSM12	100	84.404	ENSPFOG00000015930	lsm12b	56	84.404	Poecilia_formosa
ENSCHOG00000001198	LSM12	100	84.404	ENSPLAG00000021089	lsm12b	56	84.404	Poecilia_latipinna
ENSCHOG00000001198	LSM12	100	84.404	ENSPMEG00000012961	lsm12b	56	84.404	Poecilia_mexicana
ENSCHOG00000001198	LSM12	100	85.321	ENSPREG00000010236	lsm12b	61	85.321	Poecilia_reticulata
ENSCHOG00000001198	LSM12	100	99.083	ENSPPYG00000008344	LSM12	56	99.083	Pongo_abelii
ENSCHOG00000001198	LSM12	73	100.000	ENSPCAG00000008790	LSM12	50	100.000	Procavia_capensis
ENSCHOG00000001198	LSM12	100	99.083	ENSPCOG00000027951	LSM12	80	99.083	Propithecus_coquereli
ENSCHOG00000001198	LSM12	100	99.083	ENSPVAG00000013706	LSM12	56	99.083	Pteropus_vampyrus
ENSCHOG00000001198	LSM12	100	85.321	ENSPNYG00000003386	lsm12b	56	85.321	Pundamilia_nyererei
ENSCHOG00000001198	LSM12	100	82.569	ENSPNAG00000018435	lsm12a	56	82.569	Pygocentrus_nattereri
ENSCHOG00000001198	LSM12	100	84.404	ENSPNAG00000004186	lsm12b	56	84.404	Pygocentrus_nattereri
ENSCHOG00000001198	LSM12	100	99.083	ENSRNOG00000020894	Lsm12	56	99.083	Rattus_norvegicus
ENSCHOG00000001198	LSM12	100	99.083	ENSRBIG00000027910	LSM12	80	99.083	Rhinopithecus_bieti
ENSCHOG00000001198	LSM12	85	94.624	ENSRROG00000000537	-	73	94.624	Rhinopithecus_roxellana
ENSCHOG00000001198	LSM12	100	99.083	ENSRROG00000045530	-	80	99.083	Rhinopithecus_roxellana
ENSCHOG00000001198	LSM12	100	99.083	ENSSBOG00000025310	LSM12	80	99.083	Saimiri_boliviensis_boliviensis
ENSCHOG00000001198	LSM12	100	95.413	ENSSHAG00000014914	LSM12	69	95.413	Sarcophilus_harrisii
ENSCHOG00000001198	LSM12	100	84.404	ENSSFOG00015020392	lsm12a	56	84.404	Scleropages_formosus
ENSCHOG00000001198	LSM12	100	87.156	ENSSFOG00015009612	lsm12	56	87.156	Scleropages_formosus
ENSCHOG00000001198	LSM12	100	86.239	ENSSMAG00000008089	lsm12b	56	86.239	Scophthalmus_maximus
ENSCHOG00000001198	LSM12	100	87.156	ENSSDUG00000012711	lsm12b	56	87.156	Seriola_dumerili
ENSCHOG00000001198	LSM12	100	87.156	ENSSLDG00000007404	lsm12b	56	87.156	Seriola_lalandi_dorsalis
ENSCHOG00000001198	LSM12	100	99.083	ENSSARG00000005537	LSM12	71	99.083	Sorex_araneus
ENSCHOG00000001198	LSM12	100	92.661	ENSSPUG00000011984	LSM12	56	92.661	Sphenodon_punctatus
ENSCHOG00000001198	LSM12	100	86.239	ENSSPAG00000017058	lsm12b	56	86.239	Stegastes_partitus
ENSCHOG00000001198	LSM12	100	99.083	ENSSSCG00000032394	LSM12	56	99.083	Sus_scrofa
ENSCHOG00000001198	LSM12	100	84.404	ENSTRUG00000007121	lsm12b	56	84.404	Takifugu_rubripes
ENSCHOG00000001198	LSM12	100	84.404	ENSTNIG00000014436	lsm12b	56	84.404	Tetraodon_nigroviridis
ENSCHOG00000001198	LSM12	100	94.495	ENSTBEG00000012392	-	56	94.495	Tupaia_belangeri
ENSCHOG00000001198	LSM12	100	98.165	ENSTBEG00000012523	-	56	98.165	Tupaia_belangeri
ENSCHOG00000001198	LSM12	100	99.083	ENSTTRG00000010433	LSM12	56	99.083	Tursiops_truncatus
ENSCHOG00000001198	LSM12	100	99.083	ENSUAMG00000006313	LSM12	68	99.083	Ursus_americanus
ENSCHOG00000001198	LSM12	100	99.083	ENSUMAG00000012987	LSM12	62	99.083	Ursus_maritimus
ENSCHOG00000001198	LSM12	100	88.991	ENSVPAG00000011145	LSM12	56	88.991	Vicugna_pacos
ENSCHOG00000001198	LSM12	100	99.083	ENSVVUG00000017581	LSM12	56	99.083	Vulpes_vulpes
ENSCHOG00000001198	LSM12	100	82.569	ENSXETG00000003371	lsm12	55	82.569	Xenopus_tropicalis
ENSCHOG00000001198	LSM12	100	85.321	ENSXCOG00000003994	lsm12b	56	85.321	Xiphophorus_couchianus
ENSCHOG00000001198	LSM12	100	85.321	ENSXMAG00000020950	lsm12b	56	85.321	Xiphophorus_maculatus