EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000001476 (Gene tree)
Gene ID: -
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 14246 bases
Position: chrGeneScaffold_1003:4-14249
Accession: 10769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000001310	DUF382	PF04037.13	5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000001484	SF3B2-201	2667	-	ENSCHOP00000001310	888 (aa)	-	UPI0001F9E441

Gene Model

Click here to download ENSCHOG00000001476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000001476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000001476	SF3B2	77	91.237	ENSG00000087365	SF3B2	91	99.485	Homo_sapiens
ENSCHOG00000001476	SF3B2	76	78.035	ENSAPOG00000001974	sf3b2	85	86.310	Acanthochromis_polyacanthus
ENSCHOG00000001476	SF3B2	92	90.769	ENSAMEG00000017206	SF3B2	91	98.974	Ailuropoda_melanoleuca
ENSCHOG00000001476	SF3B2	70	79.592	ENSACIG00000000624	sf3b2	64	87.245	Amphilophus_citrinellus
ENSCHOG00000001476	SF3B2	78	80.102	ENSAOCG00000009207	sf3b2	89	87.755	Amphiprion_ocellaris
ENSCHOG00000001476	SF3B2	90	80.612	ENSAPEG00000002762	sf3b2	86	87.245	Amphiprion_percula
ENSCHOG00000001476	SF3B2	89	74.096	ENSACAG00000008615	SF3B2	86	76.433	Anolis_carolinensis
ENSCHOG00000001476	SF3B2	90	91.237	ENSANAG00000029120	SF3B2	89	99.485	Aotus_nancymaae
ENSCHOG00000001476	SF3B2	78	80.612	ENSACLG00000014771	sf3b2	89	88.265	Astatotilapia_calliptera
ENSCHOG00000001476	SF3B2	69	77.000	ENSAMXG00000007929	sf3b2	89	84.000	Astyanax_mexicanus
ENSCHOG00000001476	SF3B2	92	91.237	ENSBTAG00000002778	SF3B2	91	99.485	Bos_taurus
ENSCHOG00000001476	SF3B2	77	91.237	ENSCJAG00000001656	SF3B2	89	99.485	Callithrix_jacchus
ENSCHOG00000001476	SF3B2	92	91.237	ENSCAFG00000013033	SF3B2	91	99.485	Canis_familiaris
ENSCHOG00000001476	SF3B2	92	91.237	ENSCAFG00020015382	SF3B2	91	99.485	Canis_lupus_dingo
ENSCHOG00000001476	SF3B2	92	91.237	ENSCHIG00000011211	SF3B2	91	99.485	Capra_hircus
ENSCHOG00000001476	SF3B2	92	91.237	ENSTSYG00000000959	SF3B2	91	99.485	Carlito_syrichta
ENSCHOG00000001476	SF3B2	51	98.667	ENSCAPG00000006065	SF3B2	86	98.667	Cavia_aperea
ENSCHOG00000001476	SF3B2	68	83.036	ENSCPOG00000008294	SF3B2	90	97.321	Cavia_porcellus
ENSCHOG00000001476	SF3B2	90	91.237	ENSCCAG00000035256	SF3B2	89	99.485	Cebus_capucinus
ENSCHOG00000001476	SF3B2	86	91.237	ENSCATG00000042240	SF3B2	91	99.485	Cercocebus_atys
ENSCHOG00000001476	SF3B2	77	91.237	ENSCLAG00000016852	SF3B2	91	99.485	Chinchilla_lanigera
ENSCHOG00000001476	SF3B2	77	91.237	ENSCSAG00000008121	SF3B2	91	99.485	Chlorocebus_sabaeus
ENSCHOG00000001476	SF3B2	92	89.175	ENSCPBG00000022465	SF3B2	84	96.907	Chrysemys_picta_bellii
ENSCHOG00000001476	SF3B2	51	69.498	ENSCING00000005665	-	72	68.199	Ciona_intestinalis
ENSCHOG00000001476	SF3B2	51	66.795	ENSCSAVG00000002029	-	72	66.409	Ciona_savignyi
ENSCHOG00000001476	SF3B2	86	91.237	ENSCANG00000039680	SF3B2	91	99.485	Colobus_angolensis_palliatus
ENSCHOG00000001476	SF3B2	77	91.237	ENSCGRG00001015741	Sf3b2	91	99.485	Cricetulus_griseus_chok1gshd
ENSCHOG00000001476	SF3B2	77	91.237	ENSCGRG00000018110	Sf3b2	91	99.485	Cricetulus_griseus_crigri
ENSCHOG00000001476	SF3B2	62	77.665	ENSCSEG00000000230	sf3b2	65	85.276	Cynoglossus_semilaevis
ENSCHOG00000001476	SF3B2	82	79.897	ENSCVAG00000003357	sf3b2	70	87.629	Cyprinodon_variegatus
ENSCHOG00000001476	SF3B2	63	78.607	ENSDARG00000018049	sf3b2	84	86.070	Danio_rerio
ENSCHOG00000001476	SF3B2	92	91.237	ENSDNOG00000009484	SF3B2	91	99.485	Dasypus_novemcinctus
ENSCHOG00000001476	SF3B2	77	91.237	ENSDORG00000002495	Sf3b2	91	99.485	Dipodomys_ordii
ENSCHOG00000001476	SF3B2	74	99.462	ENSETEG00000020284	SF3B2	75	99.462	Echinops_telfairi
ENSCHOG00000001476	SF3B2	82	78.756	ENSEBUG00000013703	sf3b2	82	79.151	Eptatretus_burgeri
ENSCHOG00000001476	SF3B2	92	91.237	ENSEASG00005004508	SF3B2	91	99.485	Equus_asinus_asinus
ENSCHOG00000001476	SF3B2	92	91.237	ENSECAG00000024461	SF3B2	91	99.485	Equus_caballus
ENSCHOG00000001476	SF3B2	60	100.000	ENSEEUG00000014278	-	59	100.000	Erinaceus_europaeus
ENSCHOG00000001476	SF3B2	84	76.000	ENSELUG00000005586	sf3b2	82	83.500	Esox_lucius
ENSCHOG00000001476	SF3B2	92	91.237	ENSFCAG00000013289	SF3B2	91	99.485	Felis_catus
ENSCHOG00000001476	SF3B2	63	69.399	ENSFALG00000014653	SF3B2	79	74.611	Ficedula_albicollis
ENSCHOG00000001476	SF3B2	92	91.237	ENSFDAG00000019806	SF3B2	91	99.485	Fukomys_damarensis
ENSCHOG00000001476	SF3B2	82	79.381	ENSFHEG00000020968	sf3b2	82	87.113	Fundulus_heteroclitus
ENSCHOG00000001476	SF3B2	63	78.392	ENSGMOG00000012131	sf3b2	84	85.859	Gadus_morhua
ENSCHOG00000001476	SF3B2	84	87.739	ENSGAFG00000001675	sf3b2	84	87.113	Gambusia_affinis
ENSCHOG00000001476	SF3B2	62	78.351	ENSGACG00000019012	sf3b2	84	86.082	Gasterosteus_aculeatus
ENSCHOG00000001476	SF3B2	92	89.175	ENSGAGG00000023916	SF3B2	89	96.907	Gopherus_agassizii
ENSCHOG00000001476	SF3B2	86	92.308	ENSGGOG00000028448	SF3B2	91	99.485	Gorilla_gorilla
ENSCHOG00000001476	SF3B2	78	80.612	ENSHBUG00000017349	sf3b2	89	88.265	Haplochromis_burtoni
ENSCHOG00000001476	SF3B2	77	91.237	ENSHGLG00000010807	SF3B2	91	99.485	Heterocephalus_glaber_female
ENSCHOG00000001476	SF3B2	77	91.237	ENSHGLG00100006361	SF3B2	91	99.485	Heterocephalus_glaber_male
ENSCHOG00000001476	SF3B2	90	80.102	ENSHCOG00000016203	sf3b2	88	80.612	Hippocampus_comes
ENSCHOG00000001476	SF3B2	69	76.355	ENSIPUG00000009383	sf3b2	82	82.266	Ictalurus_punctatus
ENSCHOG00000001476	SF3B2	77	91.237	ENSSTOG00000028892	SF3B2	91	99.485	Ictidomys_tridecemlineatus
ENSCHOG00000001476	SF3B2	86	93.590	ENSJJAG00000018193	Sf3b2	91	99.485	Jaculus_jaculus
ENSCHOG00000001476	SF3B2	84	87.356	ENSKMAG00000020181	sf3b2	80	87.245	Kryptolebias_marmoratus
ENSCHOG00000001476	SF3B2	90	79.592	ENSLBEG00000027739	sf3b2	89	87.245	Labrus_bergylta
ENSCHOG00000001476	SF3B2	70	86.082	ENSLACG00000010429	SF3B2	71	93.299	Latimeria_chalumnae
ENSCHOG00000001476	SF3B2	82	100.000	ENSLAFG00000002128	SF3B2	91	98.969	Loxodonta_africana
ENSCHOG00000001476	SF3B2	86	91.026	ENSMFAG00000003064	SF3B2	91	98.974	Macaca_fascicularis
ENSCHOG00000001476	SF3B2	86	91.026	ENSMMUG00000011743	SF3B2	91	84.702	Macaca_mulatta
ENSCHOG00000001476	SF3B2	86	91.237	ENSMNEG00000034437	SF3B2	91	99.485	Macaca_nemestrina
ENSCHOG00000001476	SF3B2	86	91.237	ENSMLEG00000029373	SF3B2	91	99.485	Mandrillus_leucophaeus
ENSCHOG00000001476	SF3B2	76	80.612	ENSMAMG00000014103	sf3b2	89	88.265	Mastacembelus_armatus
ENSCHOG00000001476	SF3B2	78	80.612	ENSMZEG00005020789	sf3b2	89	88.265	Maylandia_zebra
ENSCHOG00000001476	SF3B2	77	91.237	ENSMICG00000008565	-	91	99.485	Microcebus_murinus
ENSCHOG00000001476	SF3B2	92	97.949	ENSMICG00000016942	-	90	97.949	Microcebus_murinus
ENSCHOG00000001476	SF3B2	77	91.753	ENSMOCG00000003136	Sf3b2	91	98.969	Microtus_ochrogaster
ENSCHOG00000001476	SF3B2	83	79.592	ENSMMOG00000012928	sf3b2	82	87.245	Mola_mola
ENSCHOG00000001476	SF3B2	63	88.144	ENSMODG00000025020	-	83	93.168	Monodelphis_domestica
ENSCHOG00000001476	SF3B2	79	91.237	ENSMODG00000008490	-	85	99.485	Monodelphis_domestica
ENSCHOG00000001476	SF3B2	79	78.680	ENSMALG00000015137	sf3b2	70	79.188	Monopterus_albus
ENSCHOG00000001476	SF3B2	77	91.237	MGP_CAROLIEiJ_G0022539	Sf3b2	91	99.485	Mus_caroli
ENSCHOG00000001476	SF3B2	77	91.237	ENSMUSG00000024853	Sf3b2	91	99.485	Mus_musculus
ENSCHOG00000001476	SF3B2	77	91.237	MGP_PahariEiJ_G0014036	Sf3b2	91	99.485	Mus_pahari
ENSCHOG00000001476	SF3B2	77	91.237	MGP_SPRETEiJ_G0023453	Sf3b2	91	99.485	Mus_spretus
ENSCHOG00000001476	SF3B2	92	91.237	ENSMPUG00000011349	SF3B2	91	99.485	Mustela_putorius_furo
ENSCHOG00000001476	SF3B2	92	90.722	ENSMLUG00000011136	SF3B2	91	98.969	Myotis_lucifugus
ENSCHOG00000001476	SF3B2	77	91.237	ENSNGAG00000012103	Sf3b2	91	99.485	Nannospalax_galili
ENSCHOG00000001476	SF3B2	92	92.784	ENSNLEG00000006007	SF3B2	91	92.784	Nomascus_leucogenys
ENSCHOG00000001476	SF3B2	79	99.485	ENSMEUG00000000019	SF3B2	82	99.485	Notamacropus_eugenii
ENSCHOG00000001476	SF3B2	92	82.126	ENSODEG00000017764	SF3B2	90	84.021	Octodon_degus
ENSCHOG00000001476	SF3B2	90	81.122	ENSONIG00000013068	sf3b2	91	88.776	Oreochromis_niloticus
ENSCHOG00000001476	SF3B2	80	94.845	ENSOANG00000012482	SF3B2	80	92.746	Ornithorhynchus_anatinus
ENSCHOG00000001476	SF3B2	55	55.144	ENSOCUG00000024154	-	82	56.885	Oryctolagus_cuniculus
ENSCHOG00000001476	SF3B2	90	82.143	ENSORLG00000008235	sf3b2	76	89.796	Oryzias_latipes
ENSCHOG00000001476	SF3B2	90	82.143	ENSORLG00020005357	sf3b2	79	89.796	Oryzias_latipes_hni
ENSCHOG00000001476	SF3B2	90	82.143	ENSORLG00015022454	sf3b2	73	89.796	Oryzias_latipes_hsok
ENSCHOG00000001476	SF3B2	90	80.102	ENSOMEG00000017480	sf3b2	83	87.755	Oryzias_melastigma
ENSCHOG00000001476	SF3B2	76	99.485	ENSOGAG00000005799	SF3B2	76	99.485	Otolemur_garnettii
ENSCHOG00000001476	SF3B2	92	91.237	ENSOARG00000002125	SF3B2	91	99.485	Ovis_aries
ENSCHOG00000001476	SF3B2	92	91.237	ENSPPAG00000007359	SF3B2	91	99.485	Pan_paniscus
ENSCHOG00000001476	SF3B2	92	91.237	ENSPPRG00000013334	SF3B2	91	99.485	Panthera_pardus
ENSCHOG00000001476	SF3B2	90	91.237	ENSPTIG00000015022	SF3B2	91	99.485	Panthera_tigris_altaica
ENSCHOG00000001476	SF3B2	92	91.237	ENSPTRG00000003912	SF3B2	91	99.485	Pan_troglodytes
ENSCHOG00000001476	SF3B2	86	91.237	ENSPANG00000008593	SF3B2	91	99.485	Papio_anubis
ENSCHOG00000001476	SF3B2	83	80.612	ENSPKIG00000016576	sf3b2	82	87.755	Paramormyrops_kingsleyae
ENSCHOG00000001476	SF3B2	86	89.175	ENSPSIG00000003158	SF3B2	91	96.907	Pelodiscus_sinensis
ENSCHOG00000001476	SF3B2	68	79.592	ENSPMGG00000000819	sf3b2	65	87.245	Periophthalmus_magnuspinnatus
ENSCHOG00000001476	SF3B2	77	91.237	ENSPEMG00000015437	Sf3b2	91	99.485	Peromyscus_maniculatus_bairdii
ENSCHOG00000001476	SF3B2	85	91.237	ENSPEMG00000015451	-	90	91.237	Peromyscus_maniculatus_bairdii
ENSCHOG00000001476	SF3B2	91	98.969	ENSPCIG00000008381	SF3B2	90	98.969	Phascolarctos_cinereus
ENSCHOG00000001476	SF3B2	90	79.897	ENSPFOG00000002552	sf3b2	89	87.629	Poecilia_formosa
ENSCHOG00000001476	SF3B2	90	80.412	ENSPLAG00000001471	sf3b2	89	88.144	Poecilia_latipinna
ENSCHOG00000001476	SF3B2	90	79.897	ENSPMEG00000013180	sf3b2	89	87.629	Poecilia_mexicana
ENSCHOG00000001476	SF3B2	76	86.973	ENSPREG00000002665	sf3b2	73	87.629	Poecilia_reticulata
ENSCHOG00000001476	SF3B2	56	84.584	ENSPPYG00000003034	-	92	84.702	Pongo_abelii
ENSCHOG00000001476	SF3B2	92	91.237	ENSPCAG00000005129	SF3B2	91	99.485	Procavia_capensis
ENSCHOG00000001476	SF3B2	77	91.237	ENSPCOG00000025375	SF3B2	91	99.485	Propithecus_coquereli
ENSCHOG00000001476	SF3B2	52	99.371	ENSPVAG00000005466	-	76	99.371	Pteropus_vampyrus
ENSCHOG00000001476	SF3B2	63	77.157	ENSPNYG00000023594	sf3b2	75	85.787	Pundamilia_nyererei
ENSCHOG00000001476	SF3B2	90	76.617	ENSPNAG00000001891	sf3b2	89	85.075	Pygocentrus_nattereri
ENSCHOG00000001476	SF3B2	77	91.237	ENSRNOG00000020412	Sf3b2	91	99.485	Rattus_norvegicus
ENSCHOG00000001476	SF3B2	86	91.237	ENSRBIG00000034065	SF3B2	91	99.485	Rhinopithecus_bieti
ENSCHOG00000001476	SF3B2	86	91.237	ENSRROG00000034496	SF3B2	91	99.485	Rhinopithecus_roxellana
ENSCHOG00000001476	SF3B2	90	91.237	ENSSBOG00000026337	SF3B2	89	99.485	Saimiri_boliviensis_boliviensis
ENSCHOG00000001476	SF3B2	92	90.722	ENSSHAG00000010933	-	89	98.969	Sarcophilus_harrisii
ENSCHOG00000001476	SF3B2	85	83.851	ENSSHAG00000018043	-	86	83.333	Sarcophilus_harrisii
ENSCHOG00000001476	SF3B2	90	80.102	ENSSFOG00015021125	sf3b2	89	87.245	Scleropages_formosus
ENSCHOG00000001476	SF3B2	70	84.766	ENSSMAG00000004079	sf3b2	79	87.755	Scophthalmus_maximus
ENSCHOG00000001476	SF3B2	51	85.938	ENSSDUG00000008499	sf3b2	88	87.755	Seriola_dumerili
ENSCHOG00000001476	SF3B2	75	85.938	ENSSLDG00000006838	sf3b2	89	87.755	Seriola_lalandi_dorsalis
ENSCHOG00000001476	SF3B2	68	99.206	ENSSARG00000003707	-	67	99.206	Sorex_araneus
ENSCHOG00000001476	SF3B2	91	88.144	ENSSPUG00000009198	SF3B2	89	95.876	Sphenodon_punctatus
ENSCHOG00000001476	SF3B2	90	80.102	ENSSPAG00000004406	sf3b2	89	87.755	Stegastes_partitus
ENSCHOG00000001476	SF3B2	92	91.237	ENSSSCG00000012957	SF3B2	91	99.485	Sus_scrofa
ENSCHOG00000001476	SF3B2	89	69.072	ENSTRUG00000007611	sf3b2	77	89.286	Takifugu_rubripes
ENSCHOG00000001476	SF3B2	78	83.673	ENSTNIG00000007441	sf3b2	76	82.564	Tetraodon_nigroviridis
ENSCHOG00000001476	SF3B2	74	99.286	ENSTBEG00000004258	SF3B2	74	99.286	Tupaia_belangeri
ENSCHOG00000001476	SF3B2	92	91.237	ENSTTRG00000014339	SF3B2	91	99.485	Tursiops_truncatus
ENSCHOG00000001476	SF3B2	92	85.507	ENSUAMG00000020754	SF3B2	86	99.398	Ursus_americanus
ENSCHOG00000001476	SF3B2	92	91.237	ENSUMAG00000010994	SF3B2	91	99.485	Ursus_maritimus
ENSCHOG00000001476	SF3B2	68	99.153	ENSVPAG00000008695	SF3B2	72	99.153	Vicugna_pacos
ENSCHOG00000001476	SF3B2	92	91.237	ENSVVUG00000027029	SF3B2	91	99.485	Vulpes_vulpes
ENSCHOG00000001476	SF3B2	80	82.990	ENSXETG00000008422	sf3b2	71	88.660	Xenopus_tropicalis
ENSCHOG00000001476	SF3B2	51	86.590	ENSXCOG00000008943	sf3b2	64	87.629	Xiphophorus_couchianus
ENSCHOG00000001476	SF3B2	76	86.590	ENSXMAG00000008467	sf3b2	82	87.629	Xiphophorus_maculatus