EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000001744 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 27874 bases
Position: chrGeneScaffold_1949:284-28157
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000001546	zf-C2H2	PF00096.26	2.5e-19	1	2
ENSCHOP00000001546	zf-C2H2	PF00096.26	2.5e-19	2	2
ENSCHOP00000001546	zf-met	PF12874.7	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000001752	PRDM4-201	2166	-	ENSCHOP00000001546	721 (aa)	-	UPI0001F9E634

Gene Model

Click here to download ENSCHOG00000001744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000001744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000001744	PRDM4	86	98.182	ENSG00000110851	PRDM4	100	97.333	Homo_sapiens
ENSCHOG00000001744	PRDM4	85	97.196	ENSAMEG00000016174	PRDM4	75	97.196	Ailuropoda_melanoleuca
ENSCHOG00000001744	PRDM4	85	94.393	ENSAPLG00000009846	PRDM4	71	94.393	Anas_platyrhynchos
ENSCHOG00000001744	PRDM4	86	98.182	ENSANAG00000024800	PRDM4	76	98.182	Aotus_nancymaae
ENSCHOG00000001744	PRDM4	86	97.273	ENSBTAG00000012999	PRDM4	71	97.273	Bos_taurus
ENSCHOG00000001744	PRDM4	86	98.182	ENSCJAG00000015261	PRDM4	72	98.182	Callithrix_jacchus
ENSCHOG00000001744	PRDM4	86	97.273	ENSCAFG00000001788	PRDM4	71	97.273	Canis_familiaris
ENSCHOG00000001744	PRDM4	86	97.273	ENSCAFG00020004916	PRDM4	71	97.273	Canis_lupus_dingo
ENSCHOG00000001744	PRDM4	86	96.364	ENSCHIG00000019409	PRDM4	71	96.364	Capra_hircus
ENSCHOG00000001744	PRDM4	86	98.182	ENSTSYG00000009248	PRDM4	76	98.182	Carlito_syrichta
ENSCHOG00000001744	PRDM4	82	96.226	ENSCAPG00000013937	PRDM4	71	96.226	Cavia_aperea
ENSCHOG00000001744	PRDM4	82	96.226	ENSCPOG00000022385	PRDM4	71	96.226	Cavia_porcellus
ENSCHOG00000001744	PRDM4	86	98.182	ENSCCAG00000036033	PRDM4	76	98.182	Cebus_capucinus
ENSCHOG00000001744	PRDM4	86	98.182	ENSCATG00000044797	PRDM4	76	98.182	Cercocebus_atys
ENSCHOG00000001744	PRDM4	75	96.226	ENSCLAG00000007545	PRDM4	60	96.226	Chinchilla_lanigera
ENSCHOG00000001744	PRDM4	86	98.182	ENSCSAG00000002896	PRDM4	71	98.182	Chlorocebus_sabaeus
ENSCHOG00000001744	PRDM4	85	91.509	ENSCPBG00000023187	PRDM4	71	91.509	Chrysemys_picta_bellii
ENSCHOG00000001744	PRDM4	86	98.182	ENSCANG00000021804	PRDM4	71	98.182	Colobus_angolensis_palliatus
ENSCHOG00000001744	PRDM4	78	96.226	ENSCGRG00001015102	-	60	96.226	Cricetulus_griseus_chok1gshd
ENSCHOG00000001744	PRDM4	74	97.403	ENSCGRG00000004044	-	58	97.403	Cricetulus_griseus_crigri
ENSCHOG00000001744	PRDM4	86	96.364	ENSDNOG00000032478	PRDM4	77	96.364	Dasypus_novemcinctus
ENSCHOG00000001744	PRDM4	56	91.558	ENSDORG00000015081	-	57	91.262	Dipodomys_ordii
ENSCHOG00000001744	PRDM4	60	64.151	ENSEBUG00000003775	prdm4	55	64.151	Eptatretus_burgeri
ENSCHOG00000001744	PRDM4	86	97.273	ENSECAG00000015423	PRDM4	71	97.273	Equus_caballus
ENSCHOG00000001744	PRDM4	79	98.361	ENSEEUG00000006569	PRDM4	74	98.361	Erinaceus_europaeus
ENSCHOG00000001744	PRDM4	67	76.636	ENSELUG00000015265	prdm4	63	76.636	Esox_lucius
ENSCHOG00000001744	PRDM4	86	96.364	ENSFCAG00000022478	PRDM4	77	96.364	Felis_catus
ENSCHOG00000001744	PRDM4	85	94.340	ENSFALG00000013342	PRDM4	71	94.340	Ficedula_albicollis
ENSCHOG00000001744	PRDM4	83	91.818	ENSGALG00000012619	PRDM4	71	91.818	Gallus_gallus
ENSCHOG00000001744	PRDM4	85	92.523	ENSGAGG00000002763	PRDM4	67	92.523	Gopherus_agassizii
ENSCHOG00000001744	PRDM4	85	98.165	ENSGGOG00000001244	PRDM4	76	98.165	Gorilla_gorilla
ENSCHOG00000001744	PRDM4	82	97.170	ENSHGLG00000004590	PRDM4	70	97.170	Heterocephalus_glaber_female
ENSCHOG00000001744	PRDM4	75	97.170	ENSHGLG00100007464	PRDM4	60	97.170	Heterocephalus_glaber_male
ENSCHOG00000001744	PRDM4	66	76.147	ENSIPUG00000024162	prdm4	57	76.147	Ictalurus_punctatus
ENSCHOG00000001744	PRDM4	86	96.364	ENSSTOG00000016168	PRDM4	76	96.364	Ictidomys_tridecemlineatus
ENSCHOG00000001744	PRDM4	54	96.330	ENSJJAG00000022448	-	57	96.330	Jaculus_jaculus
ENSCHOG00000001744	PRDM4	85	79.245	ENSLACG00000007452	PRDM4	71	79.245	Latimeria_chalumnae
ENSCHOG00000001744	PRDM4	76	96.379	ENSLAFG00000001483	PRDM4	64	96.379	Loxodonta_africana
ENSCHOG00000001744	PRDM4	86	98.182	ENSMFAG00000041862	PRDM4	71	98.182	Macaca_fascicularis
ENSCHOG00000001744	PRDM4	86	98.182	ENSMMUG00000015550	PRDM4	71	98.182	Macaca_mulatta
ENSCHOG00000001744	PRDM4	86	98.182	ENSMNEG00000032319	PRDM4	71	98.182	Macaca_nemestrina
ENSCHOG00000001744	PRDM4	86	98.182	ENSMLEG00000039607	PRDM4	71	98.182	Mandrillus_leucophaeus
ENSCHOG00000001744	PRDM4	67	93.396	ENSMGAG00000012815	PRDM4	60	93.396	Meleagris_gallopavo
ENSCHOG00000001744	PRDM4	86	98.182	ENSMICG00000007807	PRDM4	76	98.182	Microcebus_murinus
ENSCHOG00000001744	PRDM4	85	96.262	ENSMOCG00000000753	Prdm4	71	96.262	Microtus_ochrogaster
ENSCHOG00000001744	PRDM4	85	95.283	ENSMUSG00000035529	Prdm4	71	95.283	Mus_musculus
ENSCHOG00000001744	PRDM4	85	95.283	MGP_PahariEiJ_G0031398	Prdm4	71	95.833	Mus_pahari
ENSCHOG00000001744	PRDM4	85	95.283	MGP_SPRETEiJ_G0016505	Prdm4	71	95.833	Mus_spretus
ENSCHOG00000001744	PRDM4	80	75.714	ENSMPUG00000012238	PRDM4	69	82.863	Mustela_putorius_furo
ENSCHOG00000001744	PRDM4	85	97.196	ENSMLUG00000000767	PRDM4	75	97.196	Myotis_lucifugus
ENSCHOG00000001744	PRDM4	85	97.170	ENSNGAG00000018627	Prdm4	71	97.170	Nannospalax_galili
ENSCHOG00000001744	PRDM4	86	97.273	ENSNLEG00000006748	PRDM4	76	97.273	Nomascus_leucogenys
ENSCHOG00000001744	PRDM4	67	95.283	ENSMEUG00000004495	PRDM4	60	95.283	Notamacropus_eugenii
ENSCHOG00000001744	PRDM4	70	97.170	ENSOPRG00000010192	PRDM4	55	97.170	Ochotona_princeps
ENSCHOG00000001744	PRDM4	83	92.661	ENSODEG00000014750	PRDM4	71	92.661	Octodon_degus
ENSCHOG00000001744	PRDM4	83	96.364	ENSOANG00000005526	PRDM4	71	96.364	Ornithorhynchus_anatinus
ENSCHOG00000001744	PRDM4	75	98.113	ENSOCUG00000012859	PRDM4	64	98.113	Oryctolagus_cuniculus
ENSCHOG00000001744	PRDM4	85	98.113	ENSOGAG00000011945	PRDM4	76	98.113	Otolemur_garnettii
ENSCHOG00000001744	PRDM4	86	96.364	ENSOARG00000017955	PRDM4	71	96.364	Ovis_aries
ENSCHOG00000001744	PRDM4	86	98.182	ENSPPAG00000038438	PRDM4	76	98.182	Pan_paniscus
ENSCHOG00000001744	PRDM4	86	96.364	ENSPPRG00000004144	PRDM4	76	96.364	Panthera_pardus
ENSCHOG00000001744	PRDM4	86	96.364	ENSPTIG00000005847	PRDM4	76	96.364	Panthera_tigris_altaica
ENSCHOG00000001744	PRDM4	86	98.182	ENSPTRG00000005400	PRDM4	76	98.182	Pan_troglodytes
ENSCHOG00000001744	PRDM4	86	98.182	ENSPANG00000022084	PRDM4	71	98.182	Papio_anubis
ENSCHOG00000001744	PRDM4	66	80.374	ENSPKIG00000000875	prdm4	62	80.374	Paramormyrops_kingsleyae
ENSCHOG00000001744	PRDM4	82	92.453	ENSPSIG00000012066	PRDM4	87	92.453	Pelodiscus_sinensis
ENSCHOG00000001744	PRDM4	85	96.226	ENSPEMG00000014598	Prdm4	71	96.226	Peromyscus_maniculatus_bairdii
ENSCHOG00000001744	PRDM4	83	93.636	ENSPCIG00000009471	PRDM4	72	93.636	Phascolarctos_cinereus
ENSCHOG00000001744	PRDM4	86	98.182	ENSPPYG00000004913	PRDM4	76	98.182	Pongo_abelii
ENSCHOG00000001744	PRDM4	74	91.667	ENSPCAG00000009987	PRDM4	63	91.667	Procavia_capensis
ENSCHOG00000001744	PRDM4	86	98.182	ENSPCOG00000021060	PRDM4	76	98.182	Propithecus_coquereli
ENSCHOG00000001744	PRDM4	86	96.364	ENSPVAG00000001596	PRDM4	76	96.364	Pteropus_vampyrus
ENSCHOG00000001744	PRDM4	85	96.226	ENSRNOG00000004962	Prdm4	71	96.226	Rattus_norvegicus
ENSCHOG00000001744	PRDM4	86	98.182	ENSRBIG00000035488	PRDM4	71	98.182	Rhinopithecus_bieti
ENSCHOG00000001744	PRDM4	86	98.182	ENSRROG00000012779	PRDM4	71	98.182	Rhinopithecus_roxellana
ENSCHOG00000001744	PRDM4	86	98.182	ENSSBOG00000000403	PRDM4	76	98.182	Saimiri_boliviensis_boliviensis
ENSCHOG00000001744	PRDM4	66	79.630	ENSSFOG00015023358	prdm4	62	79.439	Scleropages_formosus
ENSCHOG00000001744	PRDM4	86	97.273	ENSSSCG00000000160	PRDM4	77	97.273	Sus_scrofa
ENSCHOG00000001744	PRDM4	85	94.393	ENSTGUG00000010962	-	71	94.393	Taeniopygia_guttata
ENSCHOG00000001744	PRDM4	86	97.273	ENSTTRG00000011056	PRDM4	71	97.273	Tursiops_truncatus
ENSCHOG00000001744	PRDM4	86	97.273	ENSUAMG00000022796	PRDM4	76	97.273	Ursus_americanus
ENSCHOG00000001744	PRDM4	86	97.273	ENSUMAG00000017231	PRDM4	76	97.273	Ursus_maritimus
ENSCHOG00000001744	PRDM4	85	96.226	ENSVPAG00000002215	PRDM4	77	96.226	Vicugna_pacos
ENSCHOG00000001744	PRDM4	86	97.273	ENSVVUG00000023397	PRDM4	71	97.273	Vulpes_vulpes