EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000001846 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 5896 bases
Position: chrGeneScaffold_3054:9841-15736
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000001628	LSM	PF01423.22	3.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000001854	SNRPN-201	801	-	ENSCHOP00000001628	266 (aa)	-	UPI0001F9E79D

Gene Model

Click here to download ENSCHOG00000001846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000001846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000001846	SNRPN	88	98.718	ENSG00000128739	SNRPN	98	98.718	Homo_sapiens
ENSCHOG00000001846	SNRPN	91	95.851	ENSAMEG00000007034	SNRPN	99	95.851	Ailuropoda_melanoleuca
ENSCHOG00000001846	SNRPN	88	98.718	ENSANAG00000034241	SNRPN	98	98.718	Aotus_nancymaae
ENSCHOG00000001846	SNRPN	88	98.291	ENSBTAG00000008251	SNRPN	99	98.190	Bos_taurus
ENSCHOG00000001846	SNRPN	88	98.718	ENSCJAG00000003759	-	98	98.718	Callithrix_jacchus
ENSCHOG00000001846	SNRPN	83	98.198	ENSCJAG00000042622	-	93	98.198	Callithrix_jacchus
ENSCHOG00000001846	SNRPN	88	98.291	ENSCAFG00000010127	SNRPN	98	98.291	Canis_familiaris
ENSCHOG00000001846	SNRPN	88	98.291	ENSCAFG00020024075	SNRPN	98	98.291	Canis_lupus_dingo
ENSCHOG00000001846	SNRPN	88	98.291	ENSCHIG00000017477	SNRPN	98	98.291	Capra_hircus
ENSCHOG00000001846	SNRPN	88	98.718	ENSTSYG00000005248	SNRPN	98	98.718	Carlito_syrichta
ENSCHOG00000001846	SNRPN	88	98.718	ENSCAPG00000003047	SNRPN	98	98.718	Cavia_aperea
ENSCHOG00000001846	SNRPN	88	98.718	ENSCPOG00000020270	SNRPN	98	98.718	Cavia_porcellus
ENSCHOG00000001846	SNRPN	88	98.718	ENSCCAG00000024231	SNRPN	98	98.718	Cebus_capucinus
ENSCHOG00000001846	SNRPN	88	98.718	ENSCATG00000032518	SNRPN	98	98.718	Cercocebus_atys
ENSCHOG00000001846	SNRPN	88	98.718	ENSCLAG00000011376	SNRPN	98	98.718	Chinchilla_lanigera
ENSCHOG00000001846	SNRPN	88	98.718	ENSCSAG00000006406	SNRPN	98	98.718	Chlorocebus_sabaeus
ENSCHOG00000001846	SNRPN	88	98.718	ENSCANG00000041156	SNRPN	98	98.718	Colobus_angolensis_palliatus
ENSCHOG00000001846	SNRPN	88	98.291	ENSCGRG00001004136	Snrpn	98	98.291	Cricetulus_griseus_chok1gshd
ENSCHOG00000001846	SNRPN	88	98.291	ENSCGRG00000001621	Snrpn	98	98.291	Cricetulus_griseus_crigri
ENSCHOG00000001846	SNRPN	63	92.216	ENSCVAG00000014193	SNRPN	67	92.593	Cyprinodon_variegatus
ENSCHOG00000001846	SNRPN	88	97.863	ENSDNOG00000037060	SNRPN	96	97.863	Dasypus_novemcinctus
ENSCHOG00000001846	SNRPN	88	99.145	ENSDORG00000004527	Snrpn	98	99.145	Dipodomys_ordii
ENSCHOG00000001846	SNRPN	88	98.291	ENSEASG00005017871	SNRPN	98	98.291	Equus_asinus_asinus
ENSCHOG00000001846	SNRPN	88	98.291	ENSECAG00000018148	SNRPN	98	98.291	Equus_caballus
ENSCHOG00000001846	SNRPN	88	97.863	ENSEEUG00000007440	-	98	97.863	Erinaceus_europaeus
ENSCHOG00000001846	SNRPN	88	98.291	ENSFCAG00000022298	-	98	98.291	Felis_catus
ENSCHOG00000001846	SNRPN	88	99.145	ENSFDAG00000016578	-	99	98.723	Fukomys_damarensis
ENSCHOG00000001846	SNRPN	69	85.792	ENSFDAG00000010528	-	86	85.792	Fukomys_damarensis
ENSCHOG00000001846	SNRPN	64	76.023	ENSGMOG00000018161	SNRPN	71	75.309	Gadus_morhua
ENSCHOG00000001846	SNRPN	88	98.718	ENSGGOG00000003988	SNRPN	98	98.718	Gorilla_gorilla
ENSCHOG00000001846	SNRPN	81	73.488	ENSGGOG00000024469	-	69	84.672	Gorilla_gorilla
ENSCHOG00000001846	SNRPN	88	84.188	ENSHGLG00000002327	-	85	84.058	Heterocephalus_glaber_female
ENSCHOG00000001846	SNRPN	78	89.855	ENSHGLG00000019812	-	86	90.338	Heterocephalus_glaber_female
ENSCHOG00000001846	SNRPN	79	79.904	ENSHGLG00000020936	-	85	78.744	Heterocephalus_glaber_female
ENSCHOG00000001846	SNRPN	88	98.718	ENSHGLG00000011924	SNRPN	98	98.718	Heterocephalus_glaber_female
ENSCHOG00000001846	SNRPN	88	98.718	ENSHGLG00100016559	SNRPN	98	98.718	Heterocephalus_glaber_male
ENSCHOG00000001846	SNRPN	88	81.624	ENSHGLG00100004881	-	85	82.126	Heterocephalus_glaber_male
ENSCHOG00000001846	SNRPN	78	89.855	ENSHGLG00100021056	-	86	90.338	Heterocephalus_glaber_male
ENSCHOG00000001846	SNRPN	88	98.718	ENSSTOG00000001339	SNRPN	98	98.718	Ictidomys_tridecemlineatus
ENSCHOG00000001846	SNRPN	88	99.145	ENSLAFG00000009458	SNRPN	98	99.145	Loxodonta_africana
ENSCHOG00000001846	SNRPN	88	98.718	ENSMFAG00000042235	SNRPN	98	98.718	Macaca_fascicularis
ENSCHOG00000001846	SNRPN	88	98.718	ENSMMUG00000023139	SNURF	98	98.718	Macaca_mulatta
ENSCHOG00000001846	SNRPN	88	98.718	ENSMNEG00000031291	SNRPN	98	98.718	Macaca_nemestrina
ENSCHOG00000001846	SNRPN	88	98.718	ENSMLEG00000038837	SNRPN	98	98.718	Mandrillus_leucophaeus
ENSCHOG00000001846	SNRPN	88	98.718	ENSMAUG00000000051	Snrpn	98	98.718	Mesocricetus_auratus
ENSCHOG00000001846	SNRPN	88	98.718	ENSMICG00000042356	SNRPN	98	98.718	Microcebus_murinus
ENSCHOG00000001846	SNRPN	88	98.718	ENSMOCG00000015350	Snrpn	100	98.298	Microtus_ochrogaster
ENSCHOG00000001846	SNRPN	88	98.718	MGP_CAROLIEiJ_G0029815	Snrpn	98	98.718	Mus_caroli
ENSCHOG00000001846	SNRPN	88	98.718	ENSMUSG00000102252	Snrpn	98	98.718	Mus_musculus
ENSCHOG00000001846	SNRPN	88	98.718	MGP_PahariEiJ_G0013040	Snrpn	98	98.718	Mus_pahari
ENSCHOG00000001846	SNRPN	88	98.718	MGP_SPRETEiJ_G0030918	Snrpn	98	98.718	Mus_spretus
ENSCHOG00000001846	SNRPN	88	98.291	ENSMPUG00000014638	-	98	98.291	Mustela_putorius_furo
ENSCHOG00000001846	SNRPN	74	53.030	ENSMPUG00000007115	-	60	74.419	Mustela_putorius_furo
ENSCHOG00000001846	SNRPN	77	60.784	ENSMLUG00000025849	-	72	62.821	Myotis_lucifugus
ENSCHOG00000001846	SNRPN	88	98.718	ENSMLUG00000023361	-	96	98.718	Myotis_lucifugus
ENSCHOG00000001846	SNRPN	86	62.281	ENSMLUG00000024428	-	62	70.370	Myotis_lucifugus
ENSCHOG00000001846	SNRPN	88	98.718	ENSNGAG00000000181	Snrpn	98	98.718	Nannospalax_galili
ENSCHOG00000001846	SNRPN	88	82.051	ENSNLEG00000001376	SNRPN	97	82.051	Nomascus_leucogenys
ENSCHOG00000001846	SNRPN	88	98.718	ENSODEG00000020110	-	98	98.718	Octodon_degus
ENSCHOG00000001846	SNRPN	88	95.726	ENSODEG00000019708	-	87	99.517	Octodon_degus
ENSCHOG00000001846	SNRPN	88	99.145	ENSODEG00000013478	-	98	99.145	Octodon_degus
ENSCHOG00000001846	SNRPN	88	82.051	ENSODEG00000016065	-	87	86.473	Octodon_degus
ENSCHOG00000001846	SNRPN	88	98.298	ENSOCUG00000003532	-	98	98.298	Oryctolagus_cuniculus
ENSCHOG00000001846	SNRPN	64	91.813	ENSORLG00020007490	SNRPN	67	93.210	Oryzias_latipes_hni
ENSCHOG00000001846	SNRPN	64	91.813	ENSORLG00015003332	SNRPN	67	93.210	Oryzias_latipes_hsok
ENSCHOG00000001846	SNRPN	64	92.398	ENSOMEG00000002066	SNRPN	67	93.827	Oryzias_melastigma
ENSCHOG00000001846	SNRPN	88	98.718	ENSOGAG00000007392	SNRPN	98	98.718	Otolemur_garnettii
ENSCHOG00000001846	SNRPN	88	98.291	ENSOARG00000009080	SNRPN	98	98.291	Ovis_aries
ENSCHOG00000001846	SNRPN	87	69.099	ENSPPAG00000034049	-	65	80.986	Pan_paniscus
ENSCHOG00000001846	SNRPN	88	98.718	ENSPPAG00000027650	SNRPN	98	98.718	Pan_paniscus
ENSCHOG00000001846	SNRPN	88	98.291	ENSPPRG00000019878	-	98	98.291	Panthera_pardus
ENSCHOG00000001846	SNRPN	77	63.902	ENSPPRG00000006957	-	73	71.523	Panthera_pardus
ENSCHOG00000001846	SNRPN	88	97.863	ENSPTIG00000004537	SNRPN	98	97.863	Panthera_tigris_altaica
ENSCHOG00000001846	SNRPN	88	98.718	ENSPTRG00000006826	SNRPN	98	98.718	Pan_troglodytes
ENSCHOG00000001846	SNRPN	87	69.528	ENSPTRG00000052400	-	65	81.690	Pan_troglodytes
ENSCHOG00000001846	SNRPN	88	98.718	ENSPANG00000020142	SNRPN	98	98.718	Papio_anubis
ENSCHOG00000001846	SNRPN	78	85.024	ENSPEMG00000013920	-	85	85.507	Peromyscus_maniculatus_bairdii
ENSCHOG00000001846	SNRPN	88	98.718	ENSPEMG00000012911	-	98	98.718	Peromyscus_maniculatus_bairdii
ENSCHOG00000001846	SNRPN	78	94.712	ENSPEMG00000020979	-	86	94.686	Peromyscus_maniculatus_bairdii
ENSCHOG00000001846	SNRPN	67	96.610	ENSPCIG00000004699	-	66	94.203	Phascolarctos_cinereus
ENSCHOG00000001846	SNRPN	63	92.216	ENSPMEG00000020674	SNRPN	68	93.125	Poecilia_mexicana
ENSCHOG00000001846	SNRPN	88	98.718	ENSPPYG00000006269	SNURF	98	98.718	Pongo_abelii
ENSCHOG00000001846	SNRPN	88	98.718	ENSPCOG00000014231	SNRPN	98	98.718	Propithecus_coquereli
ENSCHOG00000001846	SNRPN	88	98.718	ENSRNOG00000059764	Snrpn	98	98.718	Rattus_norvegicus
ENSCHOG00000001846	SNRPN	88	98.718	ENSRBIG00000041765	SNRPN	98	98.718	Rhinopithecus_bieti
ENSCHOG00000001846	SNRPN	88	98.718	ENSRROG00000035157	SNRPN	98	98.718	Rhinopithecus_roxellana
ENSCHOG00000001846	SNRPN	88	98.718	ENSSBOG00000000110	-	98	98.718	Saimiri_boliviensis_boliviensis
ENSCHOG00000001846	SNRPN	88	97.436	ENSSBOG00000024929	-	98	97.436	Saimiri_boliviensis_boliviensis
ENSCHOG00000001846	SNRPN	67	96.610	ENSSHAG00000010257	-	85	94.203	Sarcophilus_harrisii
ENSCHOG00000001846	SNRPN	88	76.923	ENSSARG00000000072	SNRPN	98	76.923	Sorex_araneus
ENSCHOG00000001846	SNRPN	88	98.718	ENSSSCG00000028124	SNRPN	100	98.707	Sus_scrofa
ENSCHOG00000001846	SNRPN	95	93.411	ENSTTRG00000010966	SNRPN	95	93.411	Tursiops_truncatus
ENSCHOG00000001846	SNRPN	84	97.768	ENSUAMG00000016284	SNRPN	78	97.768	Ursus_americanus
ENSCHOG00000001846	SNRPN	88	98.291	ENSUMAG00000025589	SNRPN	98	98.291	Ursus_maritimus
ENSCHOG00000001846	SNRPN	84	98.206	ENSVVUG00000017971	SNRPN	91	98.206	Vulpes_vulpes