EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000001878 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 45723 bases
Position: chrGeneScaffold_1463:32526-78248
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000001662	CPSF_A	PF03178.15	6.4e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000001892	SF3B3-201	3588	-	ENSCHOP00000001662	1195 (aa)	-	UPI0001F9E84C

Gene Model

Click here to download ENSCHOG00000001878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000001878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000001878	SF3B3	90	92.835	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSCHOG00000001878	SF3B3	86	89.720	ENSAPOG00000006172	sf3b3	88	89.720	Acanthochromis_polyacanthus
ENSCHOG00000001878	SF3B3	90	91.975	ENSAMEG00000002187	SF3B3	90	91.975	Ailuropoda_melanoleuca
ENSCHOG00000001878	SF3B3	82	88.839	ENSACIG00000016487	sf3b3	89	88.839	Amphilophus_citrinellus
ENSCHOG00000001878	SF3B3	90	89.720	ENSAOCG00000007158	sf3b3	90	89.720	Amphiprion_ocellaris
ENSCHOG00000001878	SF3B3	90	89.720	ENSAPEG00000022786	sf3b3	90	89.720	Amphiprion_percula
ENSCHOG00000001878	SF3B3	90	89.720	ENSATEG00000013708	sf3b3	90	89.720	Anabas_testudineus
ENSCHOG00000001878	SF3B3	71	88.785	ENSAPLG00000004996	SF3B3	88	88.785	Anas_platyrhynchos
ENSCHOG00000001878	SF3B3	90	92.212	ENSACAG00000001817	SF3B3	90	92.212	Anolis_carolinensis
ENSCHOG00000001878	SF3B3	90	92.835	ENSANAG00000028001	SF3B3	99	94.904	Aotus_nancymaae
ENSCHOG00000001878	SF3B3	86	89.720	ENSACLG00000022555	sf3b3	89	88.839	Astatotilapia_calliptera
ENSCHOG00000001878	SF3B3	90	89.408	ENSAMXG00000003410	sf3b3	90	89.408	Astyanax_mexicanus
ENSCHOG00000001878	SF3B3	90	92.835	ENSBTAG00000010627	SF3B3	90	92.835	Bos_taurus
ENSCHOG00000001878	SF3B3	90	65.217	WBGene00019323	teg-4	90	65.217	Caenorhabditis_elegans
ENSCHOG00000001878	SF3B3	90	92.835	ENSCJAG00000014773	SF3B3	90	92.835	Callithrix_jacchus
ENSCHOG00000001878	SF3B3	90	92.835	ENSCAFG00000020151	SF3B3	90	92.835	Canis_familiaris
ENSCHOG00000001878	SF3B3	90	92.835	ENSCAFG00020020912	SF3B3	90	92.835	Canis_lupus_dingo
ENSCHOG00000001878	SF3B3	90	92.835	ENSCHIG00000019822	SF3B3	90	92.835	Capra_hircus
ENSCHOG00000001878	SF3B3	90	92.835	ENSTSYG00000007910	SF3B3	90	92.835	Carlito_syrichta
ENSCHOG00000001878	SF3B3	79	90.654	ENSCAPG00000001484	SF3B3	86	90.654	Cavia_aperea
ENSCHOG00000001878	SF3B3	90	92.835	ENSCPOG00000000586	SF3B3	90	92.835	Cavia_porcellus
ENSCHOG00000001878	SF3B3	90	92.835	ENSCCAG00000017736	SF3B3	90	92.835	Cebus_capucinus
ENSCHOG00000001878	SF3B3	90	92.835	ENSCATG00000036562	SF3B3	97	94.904	Cercocebus_atys
ENSCHOG00000001878	SF3B3	90	92.835	ENSCLAG00000003921	SF3B3	90	92.835	Chinchilla_lanigera
ENSCHOG00000001878	SF3B3	90	92.835	ENSCSAG00000004371	SF3B3	90	92.835	Chlorocebus_sabaeus
ENSCHOG00000001878	SF3B3	90	93.146	ENSCPBG00000015853	SF3B3	90	93.146	Chrysemys_picta_bellii
ENSCHOG00000001878	SF3B3	90	80.685	ENSCING00000001342	-	90	80.685	Ciona_intestinalis
ENSCHOG00000001878	SF3B3	90	79.128	ENSCSAVG00000011454	-	90	79.128	Ciona_savignyi
ENSCHOG00000001878	SF3B3	90	92.835	ENSCANG00000042920	SF3B3	90	92.835	Colobus_angolensis_palliatus
ENSCHOG00000001878	SF3B3	90	92.835	ENSCGRG00001015908	Sf3b3	90	92.835	Cricetulus_griseus_chok1gshd
ENSCHOG00000001878	SF3B3	90	92.835	ENSCGRG00000010180	Sf3b3	90	92.835	Cricetulus_griseus_crigri
ENSCHOG00000001878	SF3B3	72	89.408	ENSCSEG00000014192	sf3b3	87	89.408	Cynoglossus_semilaevis
ENSCHOG00000001878	SF3B3	90	88.474	ENSCVAG00000010459	sf3b3	90	88.474	Cyprinodon_variegatus
ENSCHOG00000001878	SF3B3	90	89.408	ENSDARG00000103553	sf3b3	90	89.408	Danio_rerio
ENSCHOG00000001878	SF3B3	75	89.276	ENSDNOG00000043626	SF3B3	88	89.276	Dasypus_novemcinctus
ENSCHOG00000001878	SF3B3	90	92.835	ENSDORG00000014176	Sf3b3	90	92.835	Dipodomys_ordii
ENSCHOG00000001878	SF3B3	86	78.193	FBgn0035162	Sf3b3	85	78.193	Drosophila_melanogaster
ENSCHOG00000001878	SF3B3	72	90.295	ENSETEG00000002729	SF3B3	72	90.295	Echinops_telfairi
ENSCHOG00000001878	SF3B3	90	86.293	ENSEBUG00000006117	sf3b3	91	86.293	Eptatretus_burgeri
ENSCHOG00000001878	SF3B3	90	92.835	ENSEASG00005013376	SF3B3	90	92.835	Equus_asinus_asinus
ENSCHOG00000001878	SF3B3	90	92.835	ENSECAG00000014053	SF3B3	90	92.835	Equus_caballus
ENSCHOG00000001878	SF3B3	81	97.075	ENSEEUG00000015611	SF3B3	82	97.075	Erinaceus_europaeus
ENSCHOG00000001878	SF3B3	57	30.939	ENSELUG00000023868	ddb1	60	30.939	Esox_lucius
ENSCHOG00000001878	SF3B3	90	89.720	ENSELUG00000015417	sf3b3	90	89.720	Esox_lucius
ENSCHOG00000001878	SF3B3	90	92.835	ENSFCAG00000009487	SF3B3	90	92.835	Felis_catus
ENSCHOG00000001878	SF3B3	90	92.212	ENSFALG00000007372	SF3B3	90	92.212	Ficedula_albicollis
ENSCHOG00000001878	SF3B3	90	92.835	ENSFDAG00000002608	SF3B3	90	92.835	Fukomys_damarensis
ENSCHOG00000001878	SF3B3	90	89.097	ENSFHEG00000017824	sf3b3	90	89.097	Fundulus_heteroclitus
ENSCHOG00000001878	SF3B3	90	88.785	ENSGMOG00000008139	sf3b3	90	88.785	Gadus_morhua
ENSCHOG00000001878	SF3B3	90	92.523	ENSGALG00000002531	SF3B3	90	92.523	Gallus_gallus
ENSCHOG00000001878	SF3B3	90	89.097	ENSGAFG00000015206	sf3b3	90	89.097	Gambusia_affinis
ENSCHOG00000001878	SF3B3	90	89.720	ENSGACG00000002646	sf3b3	90	89.720	Gasterosteus_aculeatus
ENSCHOG00000001878	SF3B3	86	93.146	ENSGAGG00000006746	SF3B3	87	93.146	Gopherus_agassizii
ENSCHOG00000001878	SF3B3	90	92.835	ENSGGOG00000003246	SF3B3	99	94.904	Gorilla_gorilla
ENSCHOG00000001878	SF3B3	77	86.391	ENSHBUG00000005960	sf3b3	88	87.079	Haplochromis_burtoni
ENSCHOG00000001878	SF3B3	90	92.835	ENSHGLG00000010135	SF3B3	90	92.835	Heterocephalus_glaber_female
ENSCHOG00000001878	SF3B3	90	92.835	ENSHGLG00100011148	SF3B3	89	92.835	Heterocephalus_glaber_male
ENSCHOG00000001878	SF3B3	90	89.097	ENSHCOG00000011981	sf3b3	90	89.097	Hippocampus_comes
ENSCHOG00000001878	SF3B3	90	89.408	ENSIPUG00000020435	sf3b3	90	89.408	Ictalurus_punctatus
ENSCHOG00000001878	SF3B3	90	92.835	ENSSTOG00000007065	SF3B3	90	92.835	Ictidomys_tridecemlineatus
ENSCHOG00000001878	SF3B3	90	92.835	ENSJJAG00000003948	Sf3b3	90	92.835	Jaculus_jaculus
ENSCHOG00000001878	SF3B3	90	89.097	ENSKMAG00000004066	sf3b3	90	89.097	Kryptolebias_marmoratus
ENSCHOG00000001878	SF3B3	90	88.785	ENSLBEG00000018302	sf3b3	90	88.785	Labrus_bergylta
ENSCHOG00000001878	SF3B3	88	90.333	ENSLACG00000012501	SF3B3	90	90.333	Latimeria_chalumnae
ENSCHOG00000001878	SF3B3	90	90.654	ENSLOCG00000007566	sf3b3	90	90.654	Lepisosteus_oculatus
ENSCHOG00000001878	SF3B3	90	92.835	ENSLAFG00000012219	SF3B3	90	92.835	Loxodonta_africana
ENSCHOG00000001878	SF3B3	90	92.835	ENSMFAG00000045487	SF3B3	97	94.904	Macaca_fascicularis
ENSCHOG00000001878	SF3B3	90	92.835	ENSMMUG00000017812	SF3B3	90	92.835	Macaca_mulatta
ENSCHOG00000001878	SF3B3	90	92.835	ENSMNEG00000033385	SF3B3	90	92.835	Macaca_nemestrina
ENSCHOG00000001878	SF3B3	90	89.276	ENSMLEG00000043891	SF3B3	97	94.904	Mandrillus_leucophaeus
ENSCHOG00000001878	SF3B3	90	90.031	ENSMAMG00000016837	sf3b3	90	90.031	Mastacembelus_armatus
ENSCHOG00000001878	SF3B3	78	87.027	ENSMZEG00005026015	sf3b3	88	87.027	Maylandia_zebra
ENSCHOG00000001878	SF3B3	90	89.720	ENSMZEG00005010836	sf3b3	90	89.720	Maylandia_zebra
ENSCHOG00000001878	SF3B3	90	92.523	ENSMGAG00000001597	SF3B3	90	92.523	Meleagris_gallopavo
ENSCHOG00000001878	SF3B3	72	86.348	ENSMAUG00000013618	Sf3b3	86	86.348	Mesocricetus_auratus
ENSCHOG00000001878	SF3B3	90	92.835	ENSMICG00000001363	SF3B3	90	92.835	Microcebus_murinus
ENSCHOG00000001878	SF3B3	90	92.835	ENSMOCG00000006108	Sf3b3	90	92.835	Microtus_ochrogaster
ENSCHOG00000001878	SF3B3	78	87.027	ENSMMOG00000002598	sf3b3	86	87.027	Mola_mola
ENSCHOG00000001878	SF3B3	90	89.276	ENSMODG00000014363	SF3B3	90	89.276	Monodelphis_domestica
ENSCHOG00000001878	SF3B3	90	90.343	ENSMALG00000008014	sf3b3	90	90.343	Monopterus_albus
ENSCHOG00000001878	SF3B3	90	92.835	MGP_CAROLIEiJ_G0031563	Sf3b3	90	92.835	Mus_caroli
ENSCHOG00000001878	SF3B3	90	92.835	ENSMUSG00000033732	Sf3b3	90	92.835	Mus_musculus
ENSCHOG00000001878	SF3B3	90	92.835	MGP_SPRETEiJ_G0032681	Sf3b3	90	92.835	Mus_spretus
ENSCHOG00000001878	SF3B3	90	92.835	ENSMPUG00000010277	SF3B3	90	92.835	Mustela_putorius_furo
ENSCHOG00000001878	SF3B3	90	92.523	ENSMLUG00000014607	SF3B3	90	92.523	Myotis_lucifugus
ENSCHOG00000001878	SF3B3	90	92.835	ENSNGAG00000021903	Sf3b3	90	92.835	Nannospalax_galili
ENSCHOG00000001878	SF3B3	67	97.619	ENSNBRG00000007197	sf3b3	83	97.619	Neolamprologus_brichardi
ENSCHOG00000001878	SF3B3	90	90.654	ENSNLEG00000016127	SF3B3	99	94.904	Nomascus_leucogenys
ENSCHOG00000001878	SF3B3	82	95.515	ENSMEUG00000004479	SF3B3	84	95.515	Notamacropus_eugenii
ENSCHOG00000001878	SF3B3	88	89.276	ENSOPRG00000009847	SF3B3	90	89.276	Ochotona_princeps
ENSCHOG00000001878	SF3B3	90	92.835	ENSODEG00000014154	SF3B3	90	92.835	Octodon_degus
ENSCHOG00000001878	SF3B3	90	90.031	ENSONIG00000011198	sf3b3	90	90.031	Oreochromis_niloticus
ENSCHOG00000001878	SF3B3	90	92.835	ENSOANG00000001161	-	90	92.835	Ornithorhynchus_anatinus
ENSCHOG00000001878	SF3B3	90	92.835	ENSOCUG00000004139	SF3B3	90	92.835	Oryctolagus_cuniculus
ENSCHOG00000001878	SF3B3	90	89.097	ENSORLG00000013472	sf3b3	90	89.097	Oryzias_latipes
ENSCHOG00000001878	SF3B3	90	89.097	ENSORLG00020017473	sf3b3	90	89.097	Oryzias_latipes_hni
ENSCHOG00000001878	SF3B3	90	89.097	ENSORLG00015007710	sf3b3	90	89.097	Oryzias_latipes_hsok
ENSCHOG00000001878	SF3B3	90	89.408	ENSOMEG00000014483	sf3b3	90	89.408	Oryzias_melastigma
ENSCHOG00000001878	SF3B3	90	91.975	ENSOGAG00000016051	SF3B3	90	91.975	Otolemur_garnettii
ENSCHOG00000001878	SF3B3	90	92.835	ENSOARG00000004816	SF3B3	90	92.835	Ovis_aries
ENSCHOG00000001878	SF3B3	90	92.835	ENSPPAG00000026807	SF3B3	99	94.904	Pan_paniscus
ENSCHOG00000001878	SF3B3	90	92.835	ENSPPRG00000001686	SF3B3	90	92.835	Panthera_pardus
ENSCHOG00000001878	SF3B3	79	89.005	ENSPTIG00000020382	SF3B3	88	89.005	Panthera_tigris_altaica
ENSCHOG00000001878	SF3B3	90	92.835	ENSPTRG00000008308	SF3B3	99	94.904	Pan_troglodytes
ENSCHOG00000001878	SF3B3	90	92.835	ENSPANG00000024075	SF3B3	90	92.835	Papio_anubis
ENSCHOG00000001878	SF3B3	90	90.031	ENSPKIG00000002712	sf3b3	90	90.031	Paramormyrops_kingsleyae
ENSCHOG00000001878	SF3B3	79	89.005	ENSPSIG00000002232	SF3B3	89	89.005	Pelodiscus_sinensis
ENSCHOG00000001878	SF3B3	90	92.835	ENSPEMG00000008603	Sf3b3	90	92.835	Peromyscus_maniculatus_bairdii
ENSCHOG00000001878	SF3B3	90	88.162	ENSPMAG00000001793	sf3b3	90	88.162	Petromyzon_marinus
ENSCHOG00000001878	SF3B3	90	92.835	ENSPCIG00000014927	SF3B3	90	92.835	Phascolarctos_cinereus
ENSCHOG00000001878	SF3B3	90	88.785	ENSPFOG00000015516	sf3b3	90	88.785	Poecilia_formosa
ENSCHOG00000001878	SF3B3	90	88.785	ENSPLAG00000014330	sf3b3	90	88.785	Poecilia_latipinna
ENSCHOG00000001878	SF3B3	90	88.785	ENSPMEG00000019856	sf3b3	90	88.785	Poecilia_mexicana
ENSCHOG00000001878	SF3B3	70	88.785	ENSPREG00000019669	sf3b3	85	88.785	Poecilia_reticulata
ENSCHOG00000001878	SF3B3	90	89.147	ENSPPYG00000007539	SF3B3	89	89.147	Pongo_abelii
ENSCHOG00000001878	SF3B3	75	100.000	ENSPCAG00000002623	SF3B3	75	100.000	Procavia_capensis
ENSCHOG00000001878	SF3B3	76	96.709	ENSPCOG00000026582	SF3B3	91	96.709	Propithecus_coquereli
ENSCHOG00000001878	SF3B3	90	92.835	ENSPVAG00000000684	SF3B3	90	92.835	Pteropus_vampyrus
ENSCHOG00000001878	SF3B3	90	89.720	ENSPNYG00000003528	sf3b3	90	89.720	Pundamilia_nyererei
ENSCHOG00000001878	SF3B3	90	90.343	ENSPNAG00000015419	sf3b3	90	90.343	Pygocentrus_nattereri
ENSCHOG00000001878	SF3B3	90	92.835	ENSRNOG00000017724	Sf3b3	90	92.835	Rattus_norvegicus
ENSCHOG00000001878	SF3B3	90	92.835	ENSRBIG00000021904	SF3B3	90	92.835	Rhinopithecus_bieti
ENSCHOG00000001878	SF3B3	90	92.835	ENSRROG00000045703	SF3B3	97	94.904	Rhinopithecus_roxellana
ENSCHOG00000001878	SF3B3	90	92.835	ENSSBOG00000029156	SF3B3	99	94.904	Saimiri_boliviensis_boliviensis
ENSCHOG00000001878	SF3B3	90	92.835	ENSSHAG00000000372	SF3B3	90	92.835	Sarcophilus_harrisii
ENSCHOG00000001878	SF3B3	90	89.720	ENSSFOG00015012877	sf3b3	90	89.720	Scleropages_formosus
ENSCHOG00000001878	SF3B3	90	89.097	ENSSMAG00000014386	sf3b3	90	89.097	Scophthalmus_maximus
ENSCHOG00000001878	SF3B3	90	90.031	ENSSDUG00000021201	sf3b3	90	90.031	Seriola_dumerili
ENSCHOG00000001878	SF3B3	90	90.031	ENSSLDG00000017532	sf3b3	90	90.031	Seriola_lalandi_dorsalis
ENSCHOG00000001878	SF3B3	83	100.000	ENSSARG00000006917	SF3B3	83	100.000	Sorex_araneus
ENSCHOG00000001878	SF3B3	90	92.523	ENSSPUG00000006253	SF3B3	90	92.523	Sphenodon_punctatus
ENSCHOG00000001878	SF3B3	90	83.075	ENSSPAG00000003125	sf3b3	89	83.075	Stegastes_partitus
ENSCHOG00000001878	SF3B3	90	92.835	ENSSSCG00000025323	SF3B3	90	92.835	Sus_scrofa
ENSCHOG00000001878	SF3B3	90	92.212	ENSTGUG00000006082	SF3B3	90	92.212	Taeniopygia_guttata
ENSCHOG00000001878	SF3B3	79	89.097	ENSTNIG00000004857	sf3b3	89	89.097	Tetraodon_nigroviridis
ENSCHOG00000001878	SF3B3	73	98.485	ENSTBEG00000002946	SF3B3	78	98.485	Tupaia_belangeri
ENSCHOG00000001878	SF3B3	90	92.835	ENSTTRG00000005855	SF3B3	90	92.835	Tursiops_truncatus
ENSCHOG00000001878	SF3B3	90	92.835	ENSUAMG00000006780	SF3B3	90	92.835	Ursus_americanus
ENSCHOG00000001878	SF3B3	90	92.835	ENSUMAG00000017757	SF3B3	90	92.835	Ursus_maritimus
ENSCHOG00000001878	SF3B3	70	100.000	ENSVPAG00000003202	SF3B3	71	100.000	Vicugna_pacos
ENSCHOG00000001878	SF3B3	90	92.835	ENSVVUG00000017922	SF3B3	90	92.835	Vulpes_vulpes
ENSCHOG00000001878	SF3B3	90	90.654	ENSXETG00000032869	SF3B3	90	90.654	Xenopus_tropicalis
ENSCHOG00000001878	SF3B3	70	89.097	ENSXCOG00000013628	sf3b3	86	89.097	Xiphophorus_couchianus
ENSCHOG00000001878	SF3B3	90	89.097	ENSXMAG00000006334	sf3b3	90	89.097	Xiphophorus_maculatus