EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000002188 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 3307 bases
Position: chrscaffold_116664:926-4232
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000001936	Exo_endo_phos	PF03372.23	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000002198	-	1818	-	ENSCHOP00000001936	605 (aa)	-	UPI0001F9E6F9

Gene Model

Click here to download ENSCHOG00000002188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000002188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000002188	-	60	100.000	ENSCHOG00000012173	-	88	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000002188	-	89	95.616	ENSG00000174840	PDE12	89	95.616	Homo_sapiens
ENSCHOG00000002188	-	83	66.033	ENSAPOG00000018806	pde12	85	66.033	Acanthochromis_polyacanthus
ENSCHOG00000002188	-	89	94.521	ENSAMEG00000011802	PDE12	90	94.505	Ailuropoda_melanoleuca
ENSCHOG00000002188	-	83	65.229	ENSACIG00000014918	pde12	84	64.960	Amphilophus_citrinellus
ENSCHOG00000002188	-	83	64.946	ENSAOCG00000016376	pde12	84	64.946	Amphiprion_ocellaris
ENSCHOG00000002188	-	83	64.946	ENSAPEG00000000756	pde12	84	64.946	Amphiprion_percula
ENSCHOG00000002188	-	87	64.850	ENSATEG00000003072	pde12	90	64.850	Anabas_testudineus
ENSCHOG00000002188	-	87	71.823	ENSACAG00000003067	PDE12	90	71.823	Anolis_carolinensis
ENSCHOG00000002188	-	89	94.795	ENSANAG00000011815	PDE12	89	94.795	Aotus_nancymaae
ENSCHOG00000002188	-	83	63.859	ENSACLG00000010127	pde12	85	64.033	Astatotilapia_calliptera
ENSCHOG00000002188	-	84	67.120	ENSAMXG00000020765	pde12	83	67.120	Astyanax_mexicanus
ENSCHOG00000002188	-	89	94.795	ENSBTAG00000015563	PDE12	89	94.795	Bos_taurus
ENSCHOG00000002188	-	52	31.343	WBGene00011268	pde-12	52	31.343	Caenorhabditis_elegans
ENSCHOG00000002188	-	89	95.616	ENSCJAG00000019905	PDE12	89	95.616	Callithrix_jacchus
ENSCHOG00000002188	-	89	94.521	ENSCAFG00000007792	PDE12	89	94.521	Canis_familiaris
ENSCHOG00000002188	-	89	94.521	ENSCAFG00020006692	PDE12	89	94.521	Canis_lupus_dingo
ENSCHOG00000002188	-	89	95.342	ENSCHIG00000014202	PDE12	89	95.342	Capra_hircus
ENSCHOG00000002188	-	89	95.890	ENSTSYG00000025750	PDE12	89	95.890	Carlito_syrichta
ENSCHOG00000002188	-	89	92.877	ENSCPOG00000001620	PDE12	89	92.877	Cavia_porcellus
ENSCHOG00000002188	-	89	83.523	ENSCCAG00000031290	PDE12	88	99.115	Cebus_capucinus
ENSCHOG00000002188	-	89	95.890	ENSCATG00000044539	PDE12	89	95.890	Cercocebus_atys
ENSCHOG00000002188	-	89	90.137	ENSCLAG00000004864	PDE12	89	90.137	Chinchilla_lanigera
ENSCHOG00000002188	-	89	95.342	ENSCSAG00000012275	PDE12	89	95.342	Chlorocebus_sabaeus
ENSCHOG00000002188	-	88	80.978	ENSCPBG00000012353	PDE12	81	80.978	Chrysemys_picta_bellii
ENSCHOG00000002188	-	60	42.782	ENSCING00000006903	-	82	42.782	Ciona_intestinalis
ENSCHOG00000002188	-	89	95.890	ENSCANG00000038723	PDE12	89	95.890	Colobus_angolensis_palliatus
ENSCHOG00000002188	-	89	93.151	ENSCGRG00001021836	Pde12	89	93.151	Cricetulus_griseus_chok1gshd
ENSCHOG00000002188	-	89	93.151	ENSCGRG00000012319	Pde12	89	93.151	Cricetulus_griseus_crigri
ENSCHOG00000002188	-	83	62.398	ENSCSEG00000018538	pde12	88	62.398	Cynoglossus_semilaevis
ENSCHOG00000002188	-	83	50.136	ENSCVAG00000003624	pde12	82	50.273	Cyprinodon_variegatus
ENSCHOG00000002188	-	83	63.115	ENSDARG00000030964	pde12	84	63.115	Danio_rerio
ENSCHOG00000002188	-	89	95.890	ENSDNOG00000048413	PDE12	88	95.890	Dasypus_novemcinctus
ENSCHOG00000002188	-	89	94.247	ENSDORG00000004313	Pde12	89	94.247	Dipodomys_ordii
ENSCHOG00000002188	-	60	38.360	FBgn0051759	CG31759	67	38.360	Drosophila_melanogaster
ENSCHOG00000002188	-	53	57.812	ENSEBUG00000004803	pde12	60	57.364	Eptatretus_burgeri
ENSCHOG00000002188	-	89	95.890	ENSEASG00005000644	PDE12	89	95.890	Equus_asinus_asinus
ENSCHOG00000002188	-	89	96.164	ENSECAG00000005326	PDE12	89	96.164	Equus_caballus
ENSCHOG00000002188	-	57	91.908	ENSEEUG00000010406	-	57	91.908	Erinaceus_europaeus
ENSCHOG00000002188	-	83	66.485	ENSELUG00000014391	pde12	83	66.485	Esox_lucius
ENSCHOG00000002188	-	89	94.247	ENSFCAG00000031696	PDE12	89	94.247	Felis_catus
ENSCHOG00000002188	-	68	79.133	ENSFALG00000008401	PDE12	87	79.133	Ficedula_albicollis
ENSCHOG00000002188	-	89	94.521	ENSFDAG00000021278	PDE12	89	94.521	Fukomys_damarensis
ENSCHOG00000002188	-	82	63.142	ENSFHEG00000018967	pde12	74	63.142	Fundulus_heteroclitus
ENSCHOG00000002188	-	83	60.598	ENSGMOG00000018041	pde12	88	60.598	Gadus_morhua
ENSCHOG00000002188	-	89	77.174	ENSGALG00000052355	PDE12	85	77.174	Gallus_gallus
ENSCHOG00000002188	-	83	62.772	ENSGAFG00000002045	pde12	83	62.943	Gambusia_affinis
ENSCHOG00000002188	-	88	63.315	ENSGACG00000003914	pde12	89	63.488	Gasterosteus_aculeatus
ENSCHOG00000002188	-	88	81.250	ENSGAGG00000010266	PDE12	82	81.250	Gopherus_agassizii
ENSCHOG00000002188	-	89	95.616	ENSGGOG00000003312	PDE12	89	95.616	Gorilla_gorilla
ENSCHOG00000002188	-	83	64.130	ENSHBUG00000023370	pde12	84	64.130	Haplochromis_burtoni
ENSCHOG00000002188	-	89	92.877	ENSHGLG00000005661	PDE12	89	92.877	Heterocephalus_glaber_female
ENSCHOG00000002188	-	89	92.877	ENSHGLG00100001136	PDE12	89	92.877	Heterocephalus_glaber_male
ENSCHOG00000002188	-	83	60.160	ENSHCOG00000013749	pde12	84	60.160	Hippocampus_comes
ENSCHOG00000002188	-	83	67.302	ENSIPUG00000007123	Pde12	84	67.302	Ictalurus_punctatus
ENSCHOG00000002188	-	89	95.616	ENSSTOG00000007861	PDE12	89	95.616	Ictidomys_tridecemlineatus
ENSCHOG00000002188	-	89	92.877	ENSJJAG00000006038	Pde12	88	92.877	Jaculus_jaculus
ENSCHOG00000002188	-	86	66.667	ENSKMAG00000018523	pde12	85	66.848	Kryptolebias_marmoratus
ENSCHOG00000002188	-	83	65.761	ENSLBEG00000026775	pde12	87	65.940	Labrus_bergylta
ENSCHOG00000002188	-	83	65.217	ENSLBEG00000009762	PDE12	87	65.395	Labrus_bergylta
ENSCHOG00000002188	-	83	76.022	ENSLACG00000015492	PDE12	84	76.022	Latimeria_chalumnae
ENSCHOG00000002188	-	83	71.935	ENSLOCG00000013277	pde12	84	71.935	Lepisosteus_oculatus
ENSCHOG00000002188	-	81	94.795	ENSLAFG00000002821	PDE12	88	94.795	Loxodonta_africana
ENSCHOG00000002188	-	89	95.890	ENSMFAG00000030966	PDE12	89	95.890	Macaca_fascicularis
ENSCHOG00000002188	-	89	95.890	ENSMMUG00000004052	PDE12	89	95.890	Macaca_mulatta
ENSCHOG00000002188	-	89	95.890	ENSMNEG00000030068	PDE12	89	95.890	Macaca_nemestrina
ENSCHOG00000002188	-	89	95.890	ENSMLEG00000036137	PDE12	89	95.890	Mandrillus_leucophaeus
ENSCHOG00000002188	-	83	65.217	ENSMAMG00000014415	pde12	84	65.217	Mastacembelus_armatus
ENSCHOG00000002188	-	83	64.130	ENSMZEG00005016132	pde12	85	64.305	Maylandia_zebra
ENSCHOG00000002188	-	83	60.054	ENSMZEG00005028202	-	89	60.218	Maylandia_zebra
ENSCHOG00000002188	-	52	78.683	ENSMGAG00000006449	PDE12	99	78.683	Meleagris_gallopavo
ENSCHOG00000002188	-	89	92.877	ENSMAUG00000000442	Pde12	87	92.877	Mesocricetus_auratus
ENSCHOG00000002188	-	89	93.699	ENSMICG00000005723	PDE12	89	93.699	Microcebus_murinus
ENSCHOG00000002188	-	89	92.877	ENSMOCG00000020734	Pde12	89	92.877	Microtus_ochrogaster
ENSCHOG00000002188	-	83	63.488	ENSMMOG00000013636	pde12	83	63.488	Mola_mola
ENSCHOG00000002188	-	89	77.657	ENSMODG00000000155	PDE12	88	77.657	Monodelphis_domestica
ENSCHOG00000002188	-	83	63.315	ENSMALG00000022647	pde12	87	63.315	Monopterus_albus
ENSCHOG00000002188	-	89	92.603	MGP_CAROLIEiJ_G0019032	Pde12	89	92.603	Mus_caroli
ENSCHOG00000002188	-	89	92.055	ENSMUSG00000043702	Pde12	89	92.055	Mus_musculus
ENSCHOG00000002188	-	89	92.329	MGP_PahariEiJ_G0030049	Pde12	89	92.329	Mus_pahari
ENSCHOG00000002188	-	89	92.055	MGP_SPRETEiJ_G0019916	Pde12	89	92.055	Mus_spretus
ENSCHOG00000002188	-	89	95.342	ENSMPUG00000016869	PDE12	89	95.342	Mustela_putorius_furo
ENSCHOG00000002188	-	89	94.795	ENSMLUG00000026487	PDE12	89	94.795	Myotis_lucifugus
ENSCHOG00000002188	-	89	91.507	ENSNGAG00000001228	Pde12	89	91.507	Nannospalax_galili
ENSCHOG00000002188	-	75	64.353	ENSNBRG00000015769	pde12	55	64.353	Neolamprologus_brichardi
ENSCHOG00000002188	-	89	92.412	ENSNLEG00000034833	-	89	92.412	Nomascus_leucogenys
ENSCHOG00000002188	-	89	95.616	ENSNLEG00000007269	-	89	95.616	Nomascus_leucogenys
ENSCHOG00000002188	-	82	80.597	ENSMEUG00000006786	PDE12	86	81.884	Notamacropus_eugenii
ENSCHOG00000002188	-	89	92.603	ENSOPRG00000015273	PDE12	88	92.603	Ochotona_princeps
ENSCHOG00000002188	-	89	94.247	ENSODEG00000006268	PDE12	89	94.247	Octodon_degus
ENSCHOG00000002188	-	83	64.130	ENSONIG00000004293	pde12	89	64.305	Oreochromis_niloticus
ENSCHOG00000002188	-	78	82.229	ENSOANG00000012885	PDE12	86	82.229	Ornithorhynchus_anatinus
ENSCHOG00000002188	-	89	93.699	ENSOCUG00000000823	PDE12	89	93.699	Oryctolagus_cuniculus
ENSCHOG00000002188	-	83	64.305	ENSORLG00000017444	pde12	84	64.305	Oryzias_latipes
ENSCHOG00000002188	-	83	64.033	ENSORLG00020010469	pde12	84	64.033	Oryzias_latipes_hni
ENSCHOG00000002188	-	83	64.033	ENSORLG00015004093	pde12	84	64.033	Oryzias_latipes_hsok
ENSCHOG00000002188	-	83	62.670	ENSOMEG00000020900	pde12	84	62.670	Oryzias_melastigma
ENSCHOG00000002188	-	89	95.068	ENSOGAG00000024093	PDE12	89	95.068	Otolemur_garnettii
ENSCHOG00000002188	-	79	95.342	ENSOARG00000013642	PDE12	88	95.342	Ovis_aries
ENSCHOG00000002188	-	89	94.521	ENSPPAG00000034712	PDE12	89	94.521	Pan_paniscus
ENSCHOG00000002188	-	89	93.973	ENSPPRG00000011738	PDE12	89	93.973	Panthera_pardus
ENSCHOG00000002188	-	73	93.973	ENSPTIG00000019166	PDE12	80	100.000	Panthera_tigris_altaica
ENSCHOG00000002188	-	89	95.068	ENSPTRG00000030221	PDE12	89	95.068	Pan_troglodytes
ENSCHOG00000002188	-	89	95.616	ENSPANG00000007324	PDE12	89	95.616	Papio_anubis
ENSCHOG00000002188	-	83	65.395	ENSPKIG00000025354	pde12	85	65.395	Paramormyrops_kingsleyae
ENSCHOG00000002188	-	83	81.522	ENSPSIG00000004926	PDE12	82	81.522	Pelodiscus_sinensis
ENSCHOG00000002188	-	83	61.308	ENSPMGG00000006742	pde12	87	61.308	Periophthalmus_magnuspinnatus
ENSCHOG00000002188	-	78	93.425	ENSPEMG00000007259	Pde12	85	93.425	Peromyscus_maniculatus_bairdii
ENSCHOG00000002188	-	83	65.041	ENSPFOG00000011864	pde12	83	65.217	Poecilia_formosa
ENSCHOG00000002188	-	60	65.217	ENSPLAG00000023871	pde12	69	65.395	Poecilia_latipinna
ENSCHOG00000002188	-	83	65.217	ENSPMEG00000005674	pde12	84	65.395	Poecilia_mexicana
ENSCHOG00000002188	-	83	65.217	ENSPREG00000022831	pde12	84	65.395	Poecilia_reticulata
ENSCHOG00000002188	-	89	95.342	ENSPPYG00000013769	PDE12	89	95.342	Pongo_abelii
ENSCHOG00000002188	-	89	93.973	ENSPCOG00000026004	PDE12	89	93.973	Propithecus_coquereli
ENSCHOG00000002188	-	89	94.521	ENSPVAG00000008885	PDE12	89	94.521	Pteropus_vampyrus
ENSCHOG00000002188	-	83	64.402	ENSPNYG00000013258	pde12	84	64.578	Pundamilia_nyererei
ENSCHOG00000002188	-	83	70.300	ENSPNAG00000029032	pde12	85	70.300	Pygocentrus_nattereri
ENSCHOG00000002188	-	89	93.699	ENSRNOG00000059442	Pde12	89	93.699	Rattus_norvegicus
ENSCHOG00000002188	-	89	95.890	ENSRBIG00000040704	PDE12	89	95.890	Rhinopithecus_bieti
ENSCHOG00000002188	-	89	95.890	ENSRROG00000031279	PDE12	89	95.890	Rhinopithecus_roxellana
ENSCHOG00000002188	-	89	95.616	ENSSBOG00000023974	PDE12	89	95.616	Saimiri_boliviensis_boliviensis
ENSCHOG00000002188	-	78	64.179	ENSSFOG00015003468	pde12	86	64.179	Scleropages_formosus
ENSCHOG00000002188	-	83	63.859	ENSSMAG00000003258	pde12	86	63.859	Scophthalmus_maximus
ENSCHOG00000002188	-	83	64.578	ENSSDUG00000020470	pde12	84	64.578	Seriola_dumerili
ENSCHOG00000002188	-	83	65.395	ENSSLDG00000019833	pde12	85	65.395	Seriola_lalandi_dorsalis
ENSCHOG00000002188	-	89	93.151	ENSSARG00000007201	PDE12	89	93.151	Sorex_araneus
ENSCHOG00000002188	-	83	64.402	ENSSPAG00000014980	pde12	84	64.402	Stegastes_partitus
ENSCHOG00000002188	-	52	83.281	ENSSSCG00000034476	-	74	83.281	Sus_scrofa
ENSCHOG00000002188	-	89	95.068	ENSSSCG00000011465	-	89	95.068	Sus_scrofa
ENSCHOG00000002188	-	60	79.019	ENSTGUG00000007290	PDE12	99	79.019	Taeniopygia_guttata
ENSCHOG00000002188	-	87	64.033	ENSTRUG00000005159	pde12	84	64.033	Takifugu_rubripes
ENSCHOG00000002188	-	88	62.943	ENSTNIG00000017497	pde12	89	62.943	Tetraodon_nigroviridis
ENSCHOG00000002188	-	78	95.395	ENSTBEG00000008202	PDE12	79	95.395	Tupaia_belangeri
ENSCHOG00000002188	-	89	94.521	ENSTTRG00000014707	PDE12	89	94.521	Tursiops_truncatus
ENSCHOG00000002188	-	89	95.068	ENSUAMG00000020634	-	89	95.068	Ursus_americanus
ENSCHOG00000002188	-	62	92.694	ENSUAMG00000008368	-	83	92.694	Ursus_americanus
ENSCHOG00000002188	-	60	95.068	ENSUMAG00000021906	PDE12	84	95.068	Ursus_maritimus
ENSCHOG00000002188	-	89	94.521	ENSVVUG00000020335	PDE12	89	94.521	Vulpes_vulpes
ENSCHOG00000002188	-	84	62.295	ENSXETG00000008653	pde12	88	62.295	Xenopus_tropicalis
ENSCHOG00000002188	-	83	65.217	ENSXCOG00000000407	pde12	86	65.395	Xiphophorus_couchianus
ENSCHOG00000002188	-	83	65.217	ENSXMAG00000013370	pde12	84	65.395	Xiphophorus_maculatus