EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000002379 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 2097 bases
Position: chrscaffold_126322:2959-5055
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000002110	RRM_1	PF00076.22	9.1e-19	1	1
ENSCHOP00000002110	RRM_3	PF08777.11	1.4e-29	1	1
ENSCHOP00000002110	La	PF05383.17	5.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000002395	-	1719	-	ENSCHOP00000002110	572 (aa)	-	UPI0001F9E977

Gene Model

Click here to download ENSCHOG00000002379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000002379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000002379	-	93	82.189	ENSCHOG00000008967	-	100	82.004

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000002379	-	100	85.395	ENSG00000174720	LARP7	100	92.248	Homo_sapiens
ENSCHOG00000002379	-	99	52.073	ENSAPOG00000014570	larp7	95	53.076	Acanthochromis_polyacanthus
ENSCHOG00000002379	-	100	85.911	ENSAMEG00000015642	LARP7	100	85.739	Ailuropoda_melanoleuca
ENSCHOG00000002379	-	99	53.322	ENSACIG00000023850	larp7	99	52.539	Amphilophus_citrinellus
ENSCHOG00000002379	-	95	53.240	ENSAOCG00000016160	larp7	95	53.203	Amphiprion_ocellaris
ENSCHOG00000002379	-	95	53.887	ENSAPEG00000021823	larp7	95	53.203	Amphiprion_percula
ENSCHOG00000002379	-	98	55.035	ENSATEG00000016238	larp7	95	56.239	Anabas_testudineus
ENSCHOG00000002379	-	99	69.000	ENSAPLG00000012887	LARP7	99	68.667	Anas_platyrhynchos
ENSCHOG00000002379	-	99	68.136	ENSACAG00000010662	LARP7	95	66.441	Anolis_carolinensis
ENSCHOG00000002379	-	100	68.995	ENSANAG00000022318	-	100	68.966	Aotus_nancymaae
ENSCHOG00000002379	-	100	83.390	ENSANAG00000031139	-	100	83.219	Aotus_nancymaae
ENSCHOG00000002379	-	99	53.345	ENSACLG00000023184	larp7	95	53.888	Astatotilapia_calliptera
ENSCHOG00000002379	-	100	82.038	ENSBTAG00000009632	LARP7	97	82.586	Bos_taurus
ENSCHOG00000002379	-	100	84.880	ENSCJAG00000003711	LARP7	100	84.708	Callithrix_jacchus
ENSCHOG00000002379	-	100	83.761	ENSCAFG00000011715	LARP7	100	83.590	Canis_familiaris
ENSCHOG00000002379	-	100	85.026	ENSCAFG00020017225	LARP7	100	84.854	Canis_lupus_dingo
ENSCHOG00000002379	-	100	70.017	ENSCHIG00000013971	-	95	80.247	Capra_hircus
ENSCHOG00000002379	-	100	83.448	ENSCHIG00000014163	-	100	83.276	Capra_hircus
ENSCHOG00000002379	-	95	77.495	ENSTSYG00000035188	-	98	77.314	Carlito_syrichta
ENSCHOG00000002379	-	94	85.110	ENSTSYG00000006769	-	100	84.375	Carlito_syrichta
ENSCHOG00000002379	-	100	71.577	ENSCAPG00000009328	LARP7	100	70.588	Cavia_aperea
ENSCHOG00000002379	-	100	79.931	ENSCPOG00000011830	LARP7	100	78.893	Cavia_porcellus
ENSCHOG00000002379	-	100	84.589	ENSCCAG00000026787	-	100	84.418	Cebus_capucinus
ENSCHOG00000002379	-	95	77.049	ENSCCAG00000023563	-	100	77.049	Cebus_capucinus
ENSCHOG00000002379	-	100	85.370	ENSCATG00000043535	LARP7	100	85.198	Cercocebus_atys
ENSCHOG00000002379	-	96	84.087	ENSCLAG00000005894	LARP7	100	82.872	Chinchilla_lanigera
ENSCHOG00000002379	-	100	85.542	ENSCSAG00000003810	LARP7	100	85.370	Chlorocebus_sabaeus
ENSCHOG00000002379	-	100	69.347	ENSCPBG00000004919	LARP7	100	69.347	Chrysemys_picta_bellii
ENSCHOG00000002379	-	100	85.223	ENSCANG00000031482	LARP7	99	85.223	Colobus_angolensis_palliatus
ENSCHOG00000002379	-	90	71.128	ENSCGRG00001012747	-	99	71.128	Cricetulus_griseus_chok1gshd
ENSCHOG00000002379	-	100	81.034	ENSCGRG00001025050	-	100	80.517	Cricetulus_griseus_chok1gshd
ENSCHOG00000002379	-	96	72.744	ENSCGRG00000007642	-	99	72.744	Cricetulus_griseus_crigri
ENSCHOG00000002379	-	95	73.646	ENSCGRG00000001141	-	100	73.285	Cricetulus_griseus_crigri
ENSCHOG00000002379	-	98	54.035	ENSCSEG00000009088	larp7	95	53.874	Cynoglossus_semilaevis
ENSCHOG00000002379	-	97	54.674	ENSCVAG00000016852	larp7	80	73.770	Cyprinodon_variegatus
ENSCHOG00000002379	-	97	55.117	ENSDARG00000017315	larp7	94	52.888	Danio_rerio
ENSCHOG00000002379	-	100	89.022	ENSDNOG00000013761	LARP7	100	89.537	Dasypus_novemcinctus
ENSCHOG00000002379	-	96	84.448	ENSDORG00000008896	-	99	83.074	Dipodomys_ordii
ENSCHOG00000002379	-	100	81.142	ENSETEG00000011692	LARP7	100	80.729	Echinops_telfairi
ENSCHOG00000002379	-	100	86.426	ENSEASG00005005592	LARP7	100	86.254	Equus_asinus_asinus
ENSCHOG00000002379	-	100	86.942	ENSECAG00000000834	LARP7	100	86.770	Equus_caballus
ENSCHOG00000002379	-	95	81.636	ENSEEUG00000012824	LARP7	100	81.636	Erinaceus_europaeus
ENSCHOG00000002379	-	95	55.714	ENSELUG00000015341	larp7	89	75.410	Esox_lucius
ENSCHOG00000002379	-	100	86.403	ENSFCAG00000031966	LARP7	100	86.059	Felis_catus
ENSCHOG00000002379	-	99	70.270	ENSFALG00000000972	LARP7	97	68.581	Ficedula_albicollis
ENSCHOG00000002379	-	100	82.639	ENSFDAG00000014048	-	100	82.465	Fukomys_damarensis
ENSCHOG00000002379	-	100	76.430	ENSFDAG00000011855	-	100	76.950	Fukomys_damarensis
ENSCHOG00000002379	-	99	67.905	ENSGALG00000012048	LARP7	99	67.003	Gallus_gallus
ENSCHOG00000002379	-	97	53.229	ENSGAFG00000015400	larp7	95	54.265	Gambusia_affinis
ENSCHOG00000002379	-	97	51.024	ENSGACG00000019618	larp7	80	71.038	Gasterosteus_aculeatus
ENSCHOG00000002379	-	98	69.336	ENSGAGG00000024520	LARP7	97	69.336	Gopherus_agassizii
ENSCHOG00000002379	-	100	85.223	ENSGGOG00000023567	-	100	85.052	Gorilla_gorilla
ENSCHOG00000002379	-	87	82.376	ENSGGOG00000006438	-	97	82.178	Gorilla_gorilla
ENSCHOG00000002379	-	99	53.516	ENSHBUG00000019223	larp7	95	54.069	Haplochromis_burtoni
ENSCHOG00000002379	-	100	82.788	ENSHGLG00000002716	LARP7	100	82.616	Heterocephalus_glaber_female
ENSCHOG00000002379	-	100	82.788	ENSHGLG00100000332	LARP7	100	82.616	Heterocephalus_glaber_male
ENSCHOG00000002379	-	97	54.116	ENSIPUG00000019886	larp7	95	54.464	Ictalurus_punctatus
ENSCHOG00000002379	-	100	85.000	ENSSTOG00000011789	LARP7	100	85.690	Ictidomys_tridecemlineatus
ENSCHOG00000002379	-	100	83.621	ENSJJAG00000000257	-	100	82.759	Jaculus_jaculus
ENSCHOG00000002379	-	97	53.521	ENSKMAG00000005057	larp7	95	54.479	Kryptolebias_marmoratus
ENSCHOG00000002379	-	98	53.114	ENSLBEG00000020062	larp7	95	52.613	Labrus_bergylta
ENSCHOG00000002379	-	98	58.923	ENSLACG00000013744	LARP7	98	58.418	Latimeria_chalumnae
ENSCHOG00000002379	-	100	88.336	ENSLAFG00000015769	LARP7	100	87.993	Loxodonta_africana
ENSCHOG00000002379	-	100	85.370	ENSMFAG00000036506	LARP7	100	85.198	Macaca_fascicularis
ENSCHOG00000002379	-	100	85.198	ENSMMUG00000017911	LARP7	100	85.026	Macaca_mulatta
ENSCHOG00000002379	-	100	85.370	ENSMNEG00000034758	LARP7	100	85.198	Macaca_nemestrina
ENSCHOG00000002379	-	100	85.542	ENSMLEG00000026154	LARP7	100	85.370	Mandrillus_leucophaeus
ENSCHOG00000002379	-	99	53.345	ENSMZEG00005002084	larp7	95	53.888	Maylandia_zebra
ENSCHOG00000002379	-	99	67.692	ENSMGAG00000010947	LARP7	99	67.899	Meleagris_gallopavo
ENSCHOG00000002379	-	95	67.029	ENSMAUG00000005625	-	99	66.898	Mesocricetus_auratus
ENSCHOG00000002379	-	100	87.069	ENSMICG00000031035	LARP7	100	86.897	Microcebus_murinus
ENSCHOG00000002379	-	89	78.405	ENSMOCG00000015761	-	100	78.405	Microtus_ochrogaster
ENSCHOG00000002379	-	95	82.149	ENSMOCG00000012519	-	100	81.174	Microtus_ochrogaster
ENSCHOG00000002379	-	99	76.431	ENSMODG00000005669	LARP7	100	74.662	Monodelphis_domestica
ENSCHOG00000002379	-	95	80.254	MGP_CAROLIEiJ_G0025613	-	100	79.138	Mus_caroli
ENSCHOG00000002379	-	95	79.710	ENSMUSG00000027968	Larp7	100	82.143	Mus_musculus
ENSCHOG00000002379	-	100	79.793	MGP_PahariEiJ_G0027060	-	100	79.102	Mus_pahari
ENSCHOG00000002379	-	95	80.108	MGP_SPRETEiJ_G0026566	Larp7	100	79.174	Mus_spretus
ENSCHOG00000002379	-	100	86.034	ENSMPUG00000008331	-	100	85.862	Mustela_putorius_furo
ENSCHOG00000002379	-	95	82.537	ENSMPUG00000018052	-	100	82.904	Mustela_putorius_furo
ENSCHOG00000002379	-	86	78.088	ENSMLUG00000027214	LARP7	100	76.892	Myotis_lucifugus
ENSCHOG00000002379	-	100	79.381	ENSNGAG00000007368	-	100	79.038	Nannospalax_galili
ENSCHOG00000002379	-	100	85.026	ENSNLEG00000016354	LARP7	99	84.854	Nomascus_leucogenys
ENSCHOG00000002379	-	87	74.902	ENSMEUG00000004739	LARP7	100	73.333	Notamacropus_eugenii
ENSCHOG00000002379	-	88	86.466	ENSOPRG00000009594	-	88	86.466	Ochotona_princeps
ENSCHOG00000002379	-	91	81.664	ENSODEG00000011121	LARP7	98	79.783	Octodon_degus
ENSCHOG00000002379	-	95	54.301	ENSONIG00000008763	larp7	95	53.345	Oreochromis_niloticus
ENSCHOG00000002379	-	99	74.579	ENSOANG00000009298	LARP7	99	74.579	Ornithorhynchus_anatinus
ENSCHOG00000002379	-	100	83.448	ENSOCUG00000007073	LARP7	100	83.276	Oryctolagus_cuniculus
ENSCHOG00000002379	-	95	52.888	ENSORLG00000004978	larp7	94	53.069	Oryzias_latipes
ENSCHOG00000002379	-	95	53.069	ENSORLG00020013825	larp7	94	54.152	Oryzias_latipes_hni
ENSCHOG00000002379	-	97	53.641	ENSOMEG00000006920	larp7	95	52.823	Oryzias_melastigma
ENSCHOG00000002379	-	100	85.445	ENSOGAG00000001643	LARP7	100	85.274	Otolemur_garnettii
ENSCHOG00000002379	-	100	82.847	ENSOARG00000001809	LARP7	100	82.847	Ovis_aries
ENSCHOG00000002379	-	100	85.052	ENSPPAG00000038420	LARP7	99	84.364	Pan_paniscus
ENSCHOG00000002379	-	100	86.426	ENSPPRG00000023256	LARP7	100	86.082	Panthera_pardus
ENSCHOG00000002379	-	96	85.817	ENSPTIG00000021146	LARP7	97	85.458	Panthera_tigris_altaica
ENSCHOG00000002379	-	100	85.223	ENSPTRG00000016380	LARP7	100	85.052	Pan_troglodytes
ENSCHOG00000002379	-	100	85.395	ENSPANG00000006701	LARP7	99	85.223	Papio_anubis
ENSCHOG00000002379	-	99	56.401	ENSPKIG00000023484	larp7	94	57.143	Paramormyrops_kingsleyae
ENSCHOG00000002379	-	97	68.118	ENSPSIG00000014419	LARP7	96	68.118	Pelodiscus_sinensis
ENSCHOG00000002379	-	95	81.216	ENSPEMG00000013978	-	100	79.727	Peromyscus_maniculatus_bairdii
ENSCHOG00000002379	-	100	74.749	ENSPCIG00000020284	LARP7	98	82.051	Phascolarctos_cinereus
ENSCHOG00000002379	-	99	52.971	ENSPFOG00000000265	larp7	95	54.332	Poecilia_formosa
ENSCHOG00000002379	-	99	52.641	ENSPLAG00000012181	larp7	95	54.332	Poecilia_latipinna
ENSCHOG00000002379	-	99	52.641	ENSPMEG00000007182	larp7	95	54.332	Poecilia_mexicana
ENSCHOG00000002379	-	99	52.941	ENSPREG00000019513	larp7	95	53.623	Poecilia_reticulata
ENSCHOG00000002379	-	100	85.223	ENSPPYG00000015010	LARP7	100	85.052	Pongo_abelii
ENSCHOG00000002379	-	58	96.154	ENSPCAG00000003373	-	68	96.154	Procavia_capensis
ENSCHOG00000002379	-	80	96.000	ENSPCOG00000023946	LARP7	90	96.000	Propithecus_coquereli
ENSCHOG00000002379	-	100	79.760	ENSPVAG00000000282	LARP7	100	79.346	Pteropus_vampyrus
ENSCHOG00000002379	-	95	53.439	ENSPNAG00000017554	larp7	95	52.212	Pygocentrus_nattereri
ENSCHOG00000002379	-	95	78.300	ENSRNOG00000048989	Larp7	100	77.625	Rattus_norvegicus
ENSCHOG00000002379	-	85	96.296	ENSRBIG00000031916	LARP7	99	96.296	Rhinopithecus_bieti
ENSCHOG00000002379	-	100	85.542	ENSRROG00000033414	LARP7	100	85.542	Rhinopithecus_roxellana
ENSCHOG00000002379	-	100	84.589	ENSSBOG00000030886	-	100	84.418	Saimiri_boliviensis_boliviensis
ENSCHOG00000002379	-	100	64.261	ENSSBOG00000022652	-	100	63.746	Saimiri_boliviensis_boliviensis
ENSCHOG00000002379	-	100	74.539	ENSSHAG00000008153	LARP7	100	72.941	Sarcophilus_harrisii
ENSCHOG00000002379	-	99	54.561	ENSSFOG00015019344	larp7	95	55.315	Scleropages_formosus
ENSCHOG00000002379	-	95	54.174	ENSSMAG00000011296	larp7	95	54.054	Scophthalmus_maximus
ENSCHOG00000002379	-	99	52.623	ENSSDUG00000007045	larp7	95	54.856	Seriola_dumerili
ENSCHOG00000002379	-	50	77.852	ENSSARG00000000190	-	99	75.728	Sorex_araneus
ENSCHOG00000002379	-	99	53.299	ENSSPAG00000016066	larp7	99	52.517	Stegastes_partitus
ENSCHOG00000002379	-	100	84.906	ENSSSCG00000009119	LARP7	100	84.563	Sus_scrofa
ENSCHOG00000002379	-	99	71.160	ENSTGUG00000001804	LARP7	99	71.160	Taeniopygia_guttata
ENSCHOG00000002379	-	95	47.283	ENSTNIG00000007183	larp7	95	46.739	Tetraodon_nigroviridis
ENSCHOG00000002379	-	100	76.166	ENSTBEG00000009188	LARP7	100	75.302	Tupaia_belangeri
ENSCHOG00000002379	-	90	82.792	ENSTTRG00000005233	LARP7	100	83.365	Tursiops_truncatus
ENSCHOG00000002379	-	100	85.911	ENSUAMG00000000836	LARP7	100	85.739	Ursus_americanus
ENSCHOG00000002379	-	99	85.366	ENSUMAG00000002263	LARP7	98	85.192	Ursus_maritimus
ENSCHOG00000002379	-	100	86.254	ENSVPAG00000010502	LARP7	100	86.254	Vicugna_pacos
ENSCHOG00000002379	-	100	85.370	ENSVVUG00000002274	LARP7	100	85.198	Vulpes_vulpes
ENSCHOG00000002379	-	99	60.570	ENSXETG00000024097	larp7	98	60.678	Xenopus_tropicalis
ENSCHOG00000002379	-	97	53.571	ENSXCOG00000004883	larp7	84	72.678	Xiphophorus_couchianus
ENSCHOG00000002379	-	99	52.901	ENSXMAG00000008479	larp7	95	53.902	Xiphophorus_maculatus