EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000002426 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 34890 bases
Position: chrGeneScaffold_5271:39556-74445
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000002155	Nop52	PF05997.12	1.9e-44	1	2
ENSCHOP00000002155	Nop52	PF05997.12	1.9e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000002443	-	1716	-	ENSCHOP00000002155	572 (aa)	-	UPI0001F9EA35

Gene Model

Click here to download ENSCHOG00000002426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000002426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000002426	-	54	45.897	ENSG00000160214	RRP1	78	65.714	Homo_sapiens
ENSCHOG00000002426	-	87	49.349	ENSG00000160208	RRP1B	80	48.697	Homo_sapiens
ENSCHOG00000002426	-	55	43.881	ENSAMEG00000011448	RRP1	74	44.282	Ailuropoda_melanoleuca
ENSCHOG00000002426	-	55	41.284	ENSAOCG00000017894	-	73	41.284	Amphiprion_ocellaris
ENSCHOG00000002426	-	63	65.365	ENSANAG00000034889	RRP1B	50	65.365	Aotus_nancymaae
ENSCHOG00000002426	-	54	44.377	ENSANAG00000037815	RRP1	75	46.246	Aotus_nancymaae
ENSCHOG00000002426	-	65	59.148	ENSBTAG00000017418	RRP1B	54	59.148	Bos_taurus
ENSCHOG00000002426	-	87	48.529	ENSCJAG00000017077	RRP1B	50	64.675	Callithrix_jacchus
ENSCHOG00000002426	-	54	44.713	ENSCJAG00000043205	RRP1	67	44.713	Callithrix_jacchus
ENSCHOG00000002426	-	55	42.398	ENSCAFG00000010646	RRP1	74	42.690	Canis_familiaris
ENSCHOG00000002426	-	55	42.398	ENSCAFG00020018979	RRP1	74	42.690	Canis_lupus_dingo
ENSCHOG00000002426	-	63	63.117	ENSCAFG00020018901	RRP1B	53	63.117	Canis_lupus_dingo
ENSCHOG00000002426	-	65	60.804	ENSCHIG00000021519	RRP1B	54	60.804	Capra_hircus
ENSCHOG00000002426	-	53	42.991	ENSTSYG00000012831	RRP1	70	42.991	Carlito_syrichta
ENSCHOG00000002426	-	55	60.000	ENSCPOG00000002396	RRP1B	54	54.430	Cavia_porcellus
ENSCHOG00000002426	-	55	43.114	ENSCPOG00000038986	RRP1	74	43.072	Cavia_porcellus
ENSCHOG00000002426	-	54	45.345	ENSCCAG00000029828	RRP1	71	45.345	Cebus_capucinus
ENSCHOG00000002426	-	63	64.935	ENSCCAG00000029384	RRP1B	58	64.935	Cebus_capucinus
ENSCHOG00000002426	-	87	49.349	ENSCATG00000017423	RRP1B	80	48.860	Cercocebus_atys
ENSCHOG00000002426	-	54	45.342	ENSCATG00000015632	RRP1	71	45.921	Cercocebus_atys
ENSCHOG00000002426	-	55	43.333	ENSCLAG00000011639	RRP1	74	43.333	Chinchilla_lanigera
ENSCHOG00000002426	-	53	45.988	ENSCSAG00000007936	RRP1	98	45.988	Chlorocebus_sabaeus
ENSCHOG00000002426	-	87	48.856	ENSCSAG00000007961	RRP1B	50	64.935	Chlorocebus_sabaeus
ENSCHOG00000002426	-	53	31.013	ENSCING00000003304	-	70	31.013	Ciona_intestinalis
ENSCHOG00000002426	-	87	49.431	ENSCANG00000040952	RRP1B	80	48.943	Colobus_angolensis_palliatus
ENSCHOG00000002426	-	55	43.235	ENSCGRG00001011920	Rrp1	76	43.235	Cricetulus_griseus_chok1gshd
ENSCHOG00000002426	-	55	61.607	ENSCGRG00001010889	-	51	56.364	Cricetulus_griseus_chok1gshd
ENSCHOG00000002426	-	55	61.012	ENSCGRG00001023882	-	62	83.099	Cricetulus_griseus_chok1gshd
ENSCHOG00000002426	-	55	43.235	ENSCGRG00000008915	Rrp1	76	43.235	Cricetulus_griseus_crigri
ENSCHOG00000002426	-	55	42.042	ENSCSEG00000020711	-	63	42.042	Cynoglossus_semilaevis
ENSCHOG00000002426	-	55	39.264	ENSCVAG00000017568	-	85	39.264	Cyprinodon_variegatus
ENSCHOG00000002426	-	54	41.791	ENSDNOG00000019880	RRP1	81	38.265	Dasypus_novemcinctus
ENSCHOG00000002426	-	65	65.327	ENSDNOG00000032774	RRP1B	52	65.327	Dasypus_novemcinctus
ENSCHOG00000002426	-	53	51.863	ENSETEG00000002963	-	72	54.098	Echinops_telfairi
ENSCHOG00000002426	-	54	43.072	ENSEASG00005001673	RRP1	75	43.844	Equus_asinus_asinus
ENSCHOG00000002426	-	81	64.662	ENSEASG00005001687	RRP1B	52	64.662	Equus_asinus_asinus
ENSCHOG00000002426	-	54	42.169	ENSECAG00000015703	RRP1	74	43.544	Equus_caballus
ENSCHOG00000002426	-	82	64.662	ENSECAG00000018018	RRP1B	52	64.662	Equus_caballus
ENSCHOG00000002426	-	55	40.443	ENSELUG00000015885	-	89	39.941	Esox_lucius
ENSCHOG00000002426	-	54	44.136	ENSFCAG00000008434	RRP1	72	44.136	Felis_catus
ENSCHOG00000002426	-	55	43.119	ENSFDAG00000013728	RRP1	74	43.119	Fukomys_damarensis
ENSCHOG00000002426	-	67	46.633	ENSGALG00000035696	RRP1B	52	46.059	Gallus_gallus
ENSCHOG00000002426	-	54	39.506	ENSGACG00000001438	rrp1	51	39.506	Gasterosteus_aculeatus
ENSCHOG00000002426	-	87	49.346	ENSGGOG00000012069	RRP1B	80	48.203	Gorilla_gorilla
ENSCHOG00000002426	-	54	44.880	ENSGGOG00000000173	RRP1	71	44.880	Gorilla_gorilla
ENSCHOG00000002426	-	55	44.548	ENSHGLG00000017085	RRP1	70	45.062	Heterocephalus_glaber_female
ENSCHOG00000002426	-	53	67.378	ENSSTOG00000011790	RRP1B	53	62.338	Ictidomys_tridecemlineatus
ENSCHOG00000002426	-	54	45.652	ENSSTOG00000011116	RRP1	74	45.652	Ictidomys_tridecemlineatus
ENSCHOG00000002426	-	54	56.433	ENSJJAG00000021279	Rrp1b	53	50.985	Jaculus_jaculus
ENSCHOG00000002426	-	55	44.648	ENSJJAG00000018886	Rrp1	75	44.648	Jaculus_jaculus
ENSCHOG00000002426	-	55	38.793	ENSKMAG00000005539	rrp1	51	39.655	Kryptolebias_marmoratus
ENSCHOG00000002426	-	53	36.765	ENSLBEG00000021417	RRP1	86	38.416	Labrus_bergylta
ENSCHOG00000002426	-	54	43.452	ENSLAFG00000022901	RRP1	75	43.452	Loxodonta_africana
ENSCHOG00000002426	-	55	64.740	ENSLAFG00000000766	RRP1B	80	64.740	Loxodonta_africana
ENSCHOG00000002426	-	54	45.921	ENSMFAG00000003202	RRP1	71	45.921	Macaca_fascicularis
ENSCHOG00000002426	-	87	49.349	ENSMFAG00000039152	RRP1B	80	48.860	Macaca_fascicularis
ENSCHOG00000002426	-	54	45.345	ENSMMUG00000012304	RRP1	71	45.758	Macaca_mulatta
ENSCHOG00000002426	-	100	46.734	ENSMMUG00000000104	RRP1B	91	46.299	Macaca_mulatta
ENSCHOG00000002426	-	87	49.511	ENSMNEG00000034269	RRP1B	80	49.023	Macaca_nemestrina
ENSCHOG00000002426	-	54	45.619	ENSMNEG00000031210	RRP1	71	45.619	Macaca_nemestrina
ENSCHOG00000002426	-	87	44.137	ENSMLEG00000040044	RRP1B	78	45.534	Mandrillus_leucophaeus
ENSCHOG00000002426	-	67	46.750	ENSMGAG00000014591	RRP1B	52	46.192	Meleagris_gallopavo
ENSCHOG00000002426	-	54	59.639	ENSMAUG00000021508	Rrp1b	50	54.124	Mesocricetus_auratus
ENSCHOG00000002426	-	63	65.195	ENSMICG00000004686	RRP1B	52	65.195	Microcebus_murinus
ENSCHOG00000002426	-	54	42.433	ENSMICG00000004700	RRP1	75	42.433	Microcebus_murinus
ENSCHOG00000002426	-	55	57.270	ENSMOCG00000001117	Rrp1b	51	53.213	Microtus_ochrogaster
ENSCHOG00000002426	-	54	34.146	ENSMMOG00000019175	rrp1	84	35.494	Mola_mola
ENSCHOG00000002426	-	55	47.774	ENSMODG00000021036	-	63	40.839	Monodelphis_domestica
ENSCHOG00000002426	-	55	66.369	ENSMODG00000021033	RRP1B	51	61.538	Monodelphis_domestica
ENSCHOG00000002426	-	55	39.941	ENSMALG00000010310	rrp1	87	39.941	Monopterus_albus
ENSCHOG00000002426	-	55	56.548	MGP_CAROLIEiJ_G0021376	Rrp1b	60	77.465	Mus_caroli
ENSCHOG00000002426	-	55	57.143	ENSMUSG00000058392	Rrp1b	60	78.873	Mus_musculus
ENSCHOG00000002426	-	55	58.036	MGP_PahariEiJ_G0023695	Rrp1b	60	78.873	Mus_pahari
ENSCHOG00000002426	-	55	57.440	MGP_SPRETEiJ_G0022290	Rrp1b	60	78.873	Mus_spretus
ENSCHOG00000002426	-	53	55.864	ENSMPUG00000009810	RRP1B	52	55.864	Mustela_putorius_furo
ENSCHOG00000002426	-	65	63.568	ENSMLUG00000007738	RRP1B	53	63.568	Myotis_lucifugus
ENSCHOG00000002426	-	63	56.104	ENSNGAG00000021073	Rrp1b	50	56.104	Nannospalax_galili
ENSCHOG00000002426	-	54	44.880	ENSNLEG00000034734	RRP1	71	44.880	Nomascus_leucogenys
ENSCHOG00000002426	-	63	65.195	ENSNLEG00000001490	RRP1B	52	65.195	Nomascus_leucogenys
ENSCHOG00000002426	-	53	39.739	ENSOPRG00000001319	RRP1	89	38.608	Ochotona_princeps
ENSCHOG00000002426	-	53	46.440	ENSOANG00000006472	-	84	46.061	Ornithorhynchus_anatinus
ENSCHOG00000002426	-	55	64.970	ENSOGAG00000009872	RRP1B	50	64.970	Otolemur_garnettii
ENSCHOG00000002426	-	55	43.109	ENSOGAG00000006105	RRP1	76	43.402	Otolemur_garnettii
ENSCHOG00000002426	-	58	57.183	ENSOARG00000011314	RRP1B	51	57.183	Ovis_aries
ENSCHOG00000002426	-	54	45.897	ENSPPAG00000029050	RRP1	71	45.897	Pan_paniscus
ENSCHOG00000002426	-	80	46.060	ENSPPAG00000035319	RRP1B	78	45.280	Pan_paniscus
ENSCHOG00000002426	-	54	43.519	ENSPPRG00000010656	RRP1	73	44.785	Panthera_pardus
ENSCHOG00000002426	-	87	49.349	ENSPTRG00000013958	RRP1B	80	48.697	Pan_troglodytes
ENSCHOG00000002426	-	54	45.897	ENSPTRG00000013962	RRP1	71	45.897	Pan_troglodytes
ENSCHOG00000002426	-	87	49.349	ENSPANG00000011090	RRP1B	80	48.860	Papio_anubis
ENSCHOG00000002426	-	54	45.289	ENSPANG00000015097	RRP1	71	45.921	Papio_anubis
ENSCHOG00000002426	-	55	41.691	ENSPEMG00000018421	Rrp1	76	42.105	Peromyscus_maniculatus_bairdii
ENSCHOG00000002426	-	55	60.119	ENSPEMG00000022490	Rrp1b	51	55.155	Peromyscus_maniculatus_bairdii
ENSCHOG00000002426	-	63	61.198	ENSPCIG00000015513	RRP1B	53	61.979	Phascolarctos_cinereus
ENSCHOG00000002426	-	65	44.500	ENSPCIG00000015523	-	83	44.500	Phascolarctos_cinereus
ENSCHOG00000002426	-	87	49.349	ENSPPYG00000011470	RRP1B	80	48.697	Pongo_abelii
ENSCHOG00000002426	-	54	45.482	ENSPPYG00000011474	RRP1	71	45.482	Pongo_abelii
ENSCHOG00000002426	-	78	66.494	ENSPCOG00000017927	RRP1B	80	53.072	Propithecus_coquereli
ENSCHOG00000002426	-	54	43.363	ENSPCOG00000017706	RRP1	74	43.363	Propithecus_coquereli
ENSCHOG00000002426	-	64	55.181	ENSPVAG00000001436	RRP1B	51	55.181	Pteropus_vampyrus
ENSCHOG00000002426	-	55	59.226	ENSRNOG00000001194	Rrp1b	51	54.381	Rattus_norvegicus
ENSCHOG00000002426	-	54	45.289	ENSRBIG00000032082	RRP1	71	46.224	Rhinopithecus_bieti
ENSCHOG00000002426	-	54	45.289	ENSRROG00000039799	RRP1	71	46.224	Rhinopithecus_roxellana
ENSCHOG00000002426	-	87	49.674	ENSRROG00000031499	RRP1B	55	65.455	Rhinopithecus_roxellana
ENSCHOG00000002426	-	54	44.923	ENSSBOG00000034689	RRP1	71	44.923	Saimiri_boliviensis_boliviensis
ENSCHOG00000002426	-	55	66.071	ENSSHAG00000017789	RRP1B	50	61.979	Sarcophilus_harrisii
ENSCHOG00000002426	-	55	41.399	ENSSMAG00000016847	-	83	40.774	Scophthalmus_maximus
ENSCHOG00000002426	-	53	43.454	ENSSPUG00000002834	RRP1B	51	39.588	Sphenodon_punctatus
ENSCHOG00000002426	-	55	41.317	ENSSSCG00000037061	RRP1	75	42.308	Sus_scrofa
ENSCHOG00000002426	-	55	62.798	ENSSSCG00000021698	RRP1B	51	62.798	Sus_scrofa
ENSCHOG00000002426	-	54	37.725	ENSTRUG00000017592	rrp1	94	37.725	Takifugu_rubripes
ENSCHOG00000002426	-	54	37.386	ENSTNIG00000005053	rrp1	53	38.602	Tetraodon_nigroviridis
ENSCHOG00000002426	-	80	50.628	ENSTBEG00000000422	RRP1B	74	50.418	Tupaia_belangeri
ENSCHOG00000002426	-	63	64.935	ENSTTRG00000000723	RRP1B	52	64.935	Tursiops_truncatus
ENSCHOG00000002426	-	63	64.156	ENSUAMG00000026765	RRP1B	56	64.156	Ursus_americanus
ENSCHOG00000002426	-	56	59.710	ENSUMAG00000025510	RRP1B	66	59.710	Ursus_maritimus
ENSCHOG00000002426	-	53	40.453	ENSXETG00000013683	rrp1b	50	40.717	Xenopus_tropicalis