EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000003208 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 26215 bases
Position: chrGeneScaffold_5287:1068-27282
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000002848	RRM_1	PF00076.22	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000003225	SAFB-201	2565	-	ENSCHOP00000002848	854 (aa)	-	UPI0001F9E8E5

Gene Model

Click here to download ENSCHOG00000003208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000003208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000003208	SAFB	77	68.000	ENSCHOG00000010684	SAFB2	95	67.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000003208	SAFB	93	92.857	ENSG00000160633	SAFB	100	90.909	Homo_sapiens
ENSCHOG00000003208	SAFB	87	39.547	ENSAPOG00000022508	safb	59	33.391	Acanthochromis_polyacanthus
ENSCHOG00000003208	SAFB	93	92.857	ENSAMEG00000012254	SAFB	87	92.857	Ailuropoda_melanoleuca
ENSCHOG00000003208	SAFB	87	36.268	ENSACIG00000006247	safb	71	54.545	Amphilophus_citrinellus
ENSCHOG00000003208	SAFB	87	39.021	ENSAOCG00000006308	safb	63	33.099	Amphiprion_ocellaris
ENSCHOG00000003208	SAFB	87	39.147	ENSAPEG00000023342	safb	59	33.160	Amphiprion_percula
ENSCHOG00000003208	SAFB	87	36.398	ENSATEG00000004998	safb	60	33.622	Anabas_testudineus
ENSCHOG00000003208	SAFB	88	59.001	ENSAPLG00000005780	-	88	57.708	Anas_platyrhynchos
ENSCHOG00000003208	SAFB	88	56.477	ENSAPLG00000006355	-	91	56.494	Anas_platyrhynchos
ENSCHOG00000003208	SAFB	62	65.143	ENSACAG00000016893	-	87	46.200	Anolis_carolinensis
ENSCHOG00000003208	SAFB	93	92.857	ENSANAG00000028821	SAFB	86	92.857	Aotus_nancymaae
ENSCHOG00000003208	SAFB	63	41.711	ENSACLG00000001926	safb	58	32.496	Astatotilapia_calliptera
ENSCHOG00000003208	SAFB	93	81.217	ENSBTAG00000007875	SAFB	87	81.117	Bos_taurus
ENSCHOG00000003208	SAFB	82	77.425	ENSCJAG00000017081	SAFB	88	92.857	Callithrix_jacchus
ENSCHOG00000003208	SAFB	93	92.857	ENSCAFG00000018803	SAFB	75	92.857	Canis_familiaris
ENSCHOG00000003208	SAFB	93	92.857	ENSCAFG00020018943	SAFB	86	92.857	Canis_lupus_dingo
ENSCHOG00000003208	SAFB	93	80.556	ENSCHIG00000007262	SAFB	87	79.920	Capra_hircus
ENSCHOG00000003208	SAFB	54	80.488	ENSTSYG00000001851	-	90	80.488	Carlito_syrichta
ENSCHOG00000003208	SAFB	85	88.095	ENSCAPG00000012121	SAFB	83	83.333	Cavia_aperea
ENSCHOG00000003208	SAFB	93	88.095	ENSCPOG00000026322	SAFB	87	83.333	Cavia_porcellus
ENSCHOG00000003208	SAFB	93	92.857	ENSCCAG00000020193	SAFB	86	92.857	Cebus_capucinus
ENSCHOG00000003208	SAFB	93	92.857	ENSCATG00000029994	SAFB	86	92.857	Cercocebus_atys
ENSCHOG00000003208	SAFB	93	95.238	ENSCLAG00000007734	SAFB	87	95.238	Chinchilla_lanigera
ENSCHOG00000003208	SAFB	93	92.857	ENSCSAG00000009949	SAFB	86	92.857	Chlorocebus_sabaeus
ENSCHOG00000003208	SAFB	81	55.149	ENSCPBG00000010936	-	82	55.707	Chrysemys_picta_bellii
ENSCHOG00000003208	SAFB	81	60.345	ENSCPBG00000010928	-	82	59.222	Chrysemys_picta_bellii
ENSCHOG00000003208	SAFB	86	98.000	ENSCANG00000004774	-	84	97.917	Colobus_angolensis_palliatus
ENSCHOG00000003208	SAFB	93	88.095	ENSCANG00000019754	-	86	88.095	Colobus_angolensis_palliatus
ENSCHOG00000003208	SAFB	93	97.619	ENSCGRG00001002254	Safb	87	97.619	Cricetulus_griseus_chok1gshd
ENSCHOG00000003208	SAFB	86	97.619	ENSCGRG00000011529	Safb	83	97.619	Cricetulus_griseus_crigri
ENSCHOG00000003208	SAFB	87	37.450	ENSCSEG00000019870	safb	60	32.369	Cynoglossus_semilaevis
ENSCHOG00000003208	SAFB	87	35.859	ENSDARG00000020467	safb	52	34.698	Danio_rerio
ENSCHOG00000003208	SAFB	93	90.244	ENSDNOG00000015746	SAFB	95	84.347	Dasypus_novemcinctus
ENSCHOG00000003208	SAFB	93	92.857	ENSDORG00000016200	Safb	86	92.857	Dipodomys_ordii
ENSCHOG00000003208	SAFB	64	92.308	ENSETEG00000018679	SAFB	63	91.429	Echinops_telfairi
ENSCHOG00000003208	SAFB	93	92.857	ENSEASG00005023019	SAFB	87	92.857	Equus_asinus_asinus
ENSCHOG00000003208	SAFB	93	92.857	ENSECAG00000018659	SAFB	77	92.857	Equus_caballus
ENSCHOG00000003208	SAFB	87	36.329	ENSELUG00000022327	safb	62	33.860	Esox_lucius
ENSCHOG00000003208	SAFB	93	92.857	ENSFCAG00000011835	SAFB	86	92.857	Felis_catus
ENSCHOG00000003208	SAFB	93	58.607	ENSFALG00000013882	-	75	56.785	Ficedula_albicollis
ENSCHOG00000003208	SAFB	81	55.571	ENSFALG00000013881	-	83	56.676	Ficedula_albicollis
ENSCHOG00000003208	SAFB	92	94.000	ENSFDAG00000020306	SAFB	83	93.750	Fukomys_damarensis
ENSCHOG00000003208	SAFB	88	58.739	ENSGALG00000013365	-	82	57.916	Gallus_gallus
ENSCHOG00000003208	SAFB	88	55.056	ENSGALG00000001948	-	82	55.569	Gallus_gallus
ENSCHOG00000003208	SAFB	88	37.719	ENSGACG00000011385	safb	60	31.716	Gasterosteus_aculeatus
ENSCHOG00000003208	SAFB	88	54.115	ENSGAGG00000008424	-	86	53.875	Gopherus_agassizii
ENSCHOG00000003208	SAFB	66	57.193	ENSGAGG00000017702	-	84	55.986	Gopherus_agassizii
ENSCHOG00000003208	SAFB	93	92.857	ENSGGOG00000015109	SAFB	86	92.857	Gorilla_gorilla
ENSCHOG00000003208	SAFB	87	34.868	ENSHBUG00000009218	safb	62	32.675	Haplochromis_burtoni
ENSCHOG00000003208	SAFB	93	92.857	ENSHGLG00000015883	SAFB	87	92.857	Heterocephalus_glaber_female
ENSCHOG00000003208	SAFB	87	92.857	ENSHGLG00100004228	SAFB	74	92.857	Heterocephalus_glaber_male
ENSCHOG00000003208	SAFB	93	97.619	ENSSTOG00000002783	SAFB	93	97.619	Ictidomys_tridecemlineatus
ENSCHOG00000003208	SAFB	93	97.619	ENSJJAG00000009021	Safb	87	97.619	Jaculus_jaculus
ENSCHOG00000003208	SAFB	87	36.789	ENSLBEG00000006015	safb	59	33.569	Labrus_bergylta
ENSCHOG00000003208	SAFB	64	42.388	ENSLACG00000018090	SAFB	55	45.577	Latimeria_chalumnae
ENSCHOG00000003208	SAFB	88	39.591	ENSLOCG00000003613	safb	82	61.261	Lepisosteus_oculatus
ENSCHOG00000003208	SAFB	89	81.176	ENSLAFG00000003840	SAFB	83	79.501	Loxodonta_africana
ENSCHOG00000003208	SAFB	93	92.857	ENSMFAG00000003885	SAFB	86	92.857	Macaca_fascicularis
ENSCHOG00000003208	SAFB	93	92.857	ENSMMUG00000017970	SAFB	86	92.857	Macaca_mulatta
ENSCHOG00000003208	SAFB	93	92.857	ENSMNEG00000035637	SAFB	86	92.857	Macaca_nemestrina
ENSCHOG00000003208	SAFB	93	92.857	ENSMLEG00000038637	SAFB	87	92.857	Mandrillus_leucophaeus
ENSCHOG00000003208	SAFB	87	36.902	ENSMZEG00005009120	safb	60	33.160	Maylandia_zebra
ENSCHOG00000003208	SAFB	89	53.117	ENSMGAG00000001051	-	92	52.350	Meleagris_gallopavo
ENSCHOG00000003208	SAFB	88	59.001	ENSMGAG00000001101	-	85	57.652	Meleagris_gallopavo
ENSCHOG00000003208	SAFB	50	97.619	ENSMAUG00000005013	Safb	87	97.619	Mesocricetus_auratus
ENSCHOG00000003208	SAFB	84	70.139	ENSMICG00000046795	-	90	69.722	Microcebus_murinus
ENSCHOG00000003208	SAFB	93	90.476	ENSMICG00000008739	-	86	90.476	Microcebus_murinus
ENSCHOG00000003208	SAFB	93	97.619	ENSMOCG00000014040	Safb	87	97.619	Microtus_ochrogaster
ENSCHOG00000003208	SAFB	89	66.452	ENSMODG00000001236	SAFB	82	66.710	Monodelphis_domestica
ENSCHOG00000003208	SAFB	87	36.248	ENSMALG00000020330	safb	64	31.986	Monopterus_albus
ENSCHOG00000003208	SAFB	93	95.238	MGP_CAROLIEiJ_G0021780	Safb	87	95.238	Mus_caroli
ENSCHOG00000003208	SAFB	93	95.238	ENSMUSG00000071054	Safb	87	95.238	Mus_musculus
ENSCHOG00000003208	SAFB	93	95.238	MGP_PahariEiJ_G0020769	Safb	87	95.238	Mus_pahari
ENSCHOG00000003208	SAFB	93	92.857	ENSMPUG00000006123	SAFB	81	92.857	Mustela_putorius_furo
ENSCHOG00000003208	SAFB	93	90.476	ENSMLUG00000001081	SAFB	86	90.476	Myotis_lucifugus
ENSCHOG00000003208	SAFB	100	68.487	ENSNGAG00000019882	Safb	87	97.619	Nannospalax_galili
ENSCHOG00000003208	SAFB	79	100.000	ENSNLEG00000013551	SAFB	85	83.001	Nomascus_leucogenys
ENSCHOG00000003208	SAFB	89	73.781	ENSOPRG00000011561	-	93	75.232	Ochotona_princeps
ENSCHOG00000003208	SAFB	93	95.238	ENSODEG00000014838	SAFB	87	95.238	Octodon_degus
ENSCHOG00000003208	SAFB	88	36.490	ENSONIG00000002318	safb	60	32.632	Oreochromis_niloticus
ENSCHOG00000003208	SAFB	86	97.619	ENSOCUG00000014628	SAFB	64	97.619	Oryctolagus_cuniculus
ENSCHOG00000003208	SAFB	87	36.111	ENSORLG00020000404	safb	60	30.866	Oryzias_latipes_hni
ENSCHOG00000003208	SAFB	93	88.095	ENSOGAG00000027769	SAFB	87	88.095	Otolemur_garnettii
ENSCHOG00000003208	SAFB	84	73.222	ENSOARG00000007856	-	100	72.943	Ovis_aries
ENSCHOG00000003208	SAFB	93	76.455	ENSOARG00000007662	-	87	75.665	Ovis_aries
ENSCHOG00000003208	SAFB	93	92.857	ENSPPAG00000035129	SAFB	86	92.857	Pan_paniscus
ENSCHOG00000003208	SAFB	93	92.857	ENSPPRG00000017197	SAFB	86	92.857	Panthera_pardus
ENSCHOG00000003208	SAFB	93	92.857	ENSPTRG00000010335	SAFB	86	92.857	Pan_troglodytes
ENSCHOG00000003208	SAFB	93	92.857	ENSPANG00000007770	SAFB	86	92.857	Papio_anubis
ENSCHOG00000003208	SAFB	88	36.658	ENSPKIG00000009902	safb	69	54.630	Paramormyrops_kingsleyae
ENSCHOG00000003208	SAFB	88	56.555	ENSPSIG00000011679	-	87	56.186	Pelodiscus_sinensis
ENSCHOG00000003208	SAFB	93	97.619	ENSPEMG00000020428	Safb	87	97.619	Peromyscus_maniculatus_bairdii
ENSCHOG00000003208	SAFB	56	76.941	ENSPCIG00000009504	-	88	76.728	Phascolarctos_cinereus
ENSCHOG00000003208	SAFB	87	33.940	ENSPFOG00000007745	safb	59	32.406	Poecilia_formosa
ENSCHOG00000003208	SAFB	100	78.571	ENSPPYG00000009428	SAFB	87	92.857	Pongo_abelii
ENSCHOG00000003208	SAFB	93	87.179	ENSPCAG00000006475	SAFB	86	85.714	Procavia_capensis
ENSCHOG00000003208	SAFB	84	100.000	ENSPCOG00000014090	SAFB	86	90.476	Propithecus_coquereli
ENSCHOG00000003208	SAFB	89	95.238	ENSPVAG00000004913	SAFB	83	95.238	Pteropus_vampyrus
ENSCHOG00000003208	SAFB	91	96.000	ENSRNOG00000050543	Safb	87	95.238	Rattus_norvegicus
ENSCHOG00000003208	SAFB	93	92.857	ENSRBIG00000042509	SAFB	87	92.857	Rhinopithecus_bieti
ENSCHOG00000003208	SAFB	93	92.857	ENSRROG00000029278	SAFB	86	92.857	Rhinopithecus_roxellana
ENSCHOG00000003208	SAFB	93	92.857	ENSSBOG00000026291	SAFB	86	92.857	Saimiri_boliviensis_boliviensis
ENSCHOG00000003208	SAFB	88	40.847	ENSSFOG00015008156	safb	65	59.259	Scleropages_formosus
ENSCHOG00000003208	SAFB	87	35.741	ENSSMAG00000009316	safb	52	35.306	Scophthalmus_maximus
ENSCHOG00000003208	SAFB	87	37.004	ENSSDUG00000009652	safb	63	32.168	Seriola_dumerili
ENSCHOG00000003208	SAFB	87	39.055	ENSSLDG00000001670	safb	59	33.447	Seriola_lalandi_dorsalis
ENSCHOG00000003208	SAFB	100	71.028	ENSSARG00000010475	SAFB	93	92.857	Sorex_araneus
ENSCHOG00000003208	SAFB	81	55.495	ENSSPUG00000009820	-	90	57.629	Sphenodon_punctatus
ENSCHOG00000003208	SAFB	81	54.232	ENSSPUG00000009747	-	86	52.817	Sphenodon_punctatus
ENSCHOG00000003208	SAFB	87	37.288	ENSSPAG00000015682	safb	63	32.981	Stegastes_partitus
ENSCHOG00000003208	SAFB	93	95.238	ENSSSCG00000013522	SAFB	82	95.238	Sus_scrofa
ENSCHOG00000003208	SAFB	88	55.841	ENSTGUG00000000489	-	88	56.331	Taeniopygia_guttata
ENSCHOG00000003208	SAFB	88	57.480	ENSTGUG00000000502	-	85	55.585	Taeniopygia_guttata
ENSCHOG00000003208	SAFB	87	38.924	ENSTNIG00000015470	safb	58	34.064	Tetraodon_nigroviridis
ENSCHOG00000003208	SAFB	85	85.714	ENSTTRG00000013588	SAFB	79	85.714	Tursiops_truncatus
ENSCHOG00000003208	SAFB	76	90.476	ENSUAMG00000024543	SAFB	82	90.476	Ursus_americanus
ENSCHOG00000003208	SAFB	81	90.476	ENSUMAG00000009734	SAFB	74	94.444	Ursus_maritimus
ENSCHOG00000003208	SAFB	68	97.436	ENSVPAG00000012043	SAFB	68	97.143	Vicugna_pacos
ENSCHOG00000003208	SAFB	93	92.857	ENSVVUG00000013720	SAFB	75	92.857	Vulpes_vulpes
ENSCHOG00000003208	SAFB	64	42.342	ENSXETG00000008755	safb	63	41.831	Xenopus_tropicalis