EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000003273 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 50897 bases
Position: chrGeneScaffold_4307:11768-62664
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000002906	SHQ1	PF04925.15	2.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000003293	-	1002	-	ENSCHOP00000002906	334 (aa)	-	UPI0001F9EF82

Gene Model

Click here to download ENSCHOG00000003273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000003273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000003273	-	99	75.731	ENSG00000144736	SHQ1	100	48.182	Homo_sapiens
ENSCHOG00000003273	-	84	68.333	ENSAPOG00000000397	shq1	55	51.156	Acanthochromis_polyacanthus
ENSCHOG00000003273	-	100	75.362	ENSAMEG00000015140	SHQ1	60	75.362	Ailuropoda_melanoleuca
ENSCHOG00000003273	-	99	51.754	ENSACIG00000021249	shq1	56	51.754	Amphilophus_citrinellus
ENSCHOG00000003273	-	84	70.000	ENSAOCG00000023311	shq1	55	52.312	Amphiprion_ocellaris
ENSCHOG00000003273	-	84	70.000	ENSAPEG00000021686	shq1	55	51.445	Amphiprion_percula
ENSCHOG00000003273	-	100	55.233	ENSAPLG00000013926	SHQ1	68	55.233	Anas_platyrhynchos
ENSCHOG00000003273	-	99	73.392	ENSANAG00000029241	SHQ1	60	73.392	Aotus_nancymaae
ENSCHOG00000003273	-	98	52.239	ENSANAG00000030500	-	56	52.239	Aotus_nancymaae
ENSCHOG00000003273	-	84	95.000	ENSBTAG00000005436	SHQ1	50	95.000	Bos_taurus
ENSCHOG00000003273	-	99	72.515	ENSCJAG00000015131	SHQ1	59	72.515	Callithrix_jacchus
ENSCHOG00000003273	-	100	74.493	ENSCAFG00000006434	SHQ1	60	74.493	Canis_familiaris
ENSCHOG00000003273	-	100	74.203	ENSCAFG00020016743	SHQ1	53	95.000	Canis_lupus_dingo
ENSCHOG00000003273	-	99	67.151	ENSTSYG00000014439	SHQ1	54	96.667	Carlito_syrichta
ENSCHOG00000003273	-	84	93.333	ENSCAPG00000009343	SHQ1	51	93.333	Cavia_aperea
ENSCHOG00000003273	-	84	95.000	ENSCPOG00000011443	SHQ1	50	95.000	Cavia_porcellus
ENSCHOG00000003273	-	99	73.684	ENSCATG00000041238	SHQ1	62	73.684	Cercocebus_atys
ENSCHOG00000003273	-	100	72.464	ENSCLAG00000004206	SHQ1	50	96.667	Chinchilla_lanigera
ENSCHOG00000003273	-	88	70.297	ENSCSAG00000011514	SHQ1	62	70.297	Chlorocebus_sabaeus
ENSCHOG00000003273	-	99	37.791	ENSCING00000008013	-	73	37.791	Ciona_intestinalis
ENSCHOG00000003273	-	100	36.994	ENSCSAVG00000002332	-	76	36.994	Ciona_savignyi
ENSCHOG00000003273	-	99	73.977	ENSCANG00000039295	SHQ1	60	73.977	Colobus_angolensis_palliatus
ENSCHOG00000003273	-	100	71.304	ENSCGRG00001012583	Shq1	61	71.304	Cricetulus_griseus_chok1gshd
ENSCHOG00000003273	-	100	71.304	ENSCGRG00000009849	Shq1	61	71.304	Cricetulus_griseus_crigri
ENSCHOG00000003273	-	99	49.275	ENSCSEG00000007829	shq1	54	51.014	Cynoglossus_semilaevis
ENSCHOG00000003273	-	99	50.867	ENSCVAG00000020049	shq1	58	50.867	Cyprinodon_variegatus
ENSCHOG00000003273	-	100	74.493	ENSDNOG00000033937	SHQ1	50	96.667	Dasypus_novemcinctus
ENSCHOG00000003273	-	84	96.667	ENSETEG00000005766	SHQ1	51	96.667	Echinops_telfairi
ENSCHOG00000003273	-	66	48.035	ENSEBUG00000005445	shq1	51	48.035	Eptatretus_burgeri
ENSCHOG00000003273	-	84	95.000	ENSEASG00005002237	SHQ1	50	95.000	Equus_asinus_asinus
ENSCHOG00000003273	-	100	70.725	ENSEEUG00000010568	SHQ1	51	91.667	Erinaceus_europaeus
ENSCHOG00000003273	-	99	50.000	ENSELUG00000003476	shq1	70	46.726	Esox_lucius
ENSCHOG00000003273	-	100	74.783	ENSFCAG00000012781	SHQ1	60	74.783	Felis_catus
ENSCHOG00000003273	-	84	71.667	ENSFALG00000013428	SHQ1	56	57.310	Ficedula_albicollis
ENSCHOG00000003273	-	100	45.954	ENSGMOG00000007350	shq1	87	46.667	Gadus_morhua
ENSCHOG00000003273	-	84	63.793	ENSGACG00000011797	shq1	87	49.565	Gasterosteus_aculeatus
ENSCHOG00000003273	-	99	74.854	ENSGGOG00000034818	SHQ1	62	74.854	Gorilla_gorilla
ENSCHOG00000003273	-	84	68.333	ENSHCOG00000010799	shq1	57	50.000	Hippocampus_comes
ENSCHOG00000003273	-	84	88.333	ENSSTOG00000010043	SHQ1	53	88.333	Ictidomys_tridecemlineatus
ENSCHOG00000003273	-	84	91.667	ENSJJAG00000017611	Shq1	51	91.667	Jaculus_jaculus
ENSCHOG00000003273	-	100	57.434	ENSLOCG00000009970	shq1	50	71.186	Lepisosteus_oculatus
ENSCHOG00000003273	-	99	73.684	ENSMFAG00000039148	SHQ1	62	73.684	Macaca_fascicularis
ENSCHOG00000003273	-	81	68.000	ENSMFAG00000037396	-	51	68.000	Macaca_fascicularis
ENSCHOG00000003273	-	81	68.000	ENSMMUG00000021761	-	51	68.000	Macaca_mulatta
ENSCHOG00000003273	-	99	73.392	ENSMMUG00000009571	SHQ1	62	73.392	Macaca_mulatta
ENSCHOG00000003273	-	99	73.684	ENSMNEG00000032667	SHQ1	59	73.684	Macaca_nemestrina
ENSCHOG00000003273	-	99	73.684	ENSMLEG00000038493	SHQ1	59	73.684	Mandrillus_leucophaeus
ENSCHOG00000003273	-	100	71.884	ENSMAUG00000022030	Shq1	52	95.000	Mesocricetus_auratus
ENSCHOG00000003273	-	84	96.667	ENSMICG00000009224	SHQ1	54	96.667	Microcebus_murinus
ENSCHOG00000003273	-	100	71.304	ENSMOCG00000017836	Shq1	61	71.304	Microtus_ochrogaster
ENSCHOG00000003273	-	84	84.483	ENSMODG00000003926	SHQ1	52	84.483	Monodelphis_domestica
ENSCHOG00000003273	-	100	69.855	MGP_CAROLIEiJ_G0028689	Shq1	61	69.855	Mus_caroli
ENSCHOG00000003273	-	100	70.145	ENSMUSG00000035378	Shq1	51	92.500	Mus_musculus
ENSCHOG00000003273	-	100	71.014	MGP_PahariEiJ_G0022440	Shq1	61	71.014	Mus_pahari
ENSCHOG00000003273	-	100	70.145	MGP_SPRETEiJ_G0029717	Shq1	61	70.145	Mus_spretus
ENSCHOG00000003273	-	100	70.893	ENSMLUG00000013539	SHQ1	66	70.605	Myotis_lucifugus
ENSCHOG00000003273	-	100	57.225	ENSNGAG00000023317	Shq1	59	56.812	Nannospalax_galili
ENSCHOG00000003273	-	99	75.731	ENSNLEG00000002731	SHQ1	62	75.731	Nomascus_leucogenys
ENSCHOG00000003273	-	94	62.112	ENSMEUG00000009350	-	60	62.112	Notamacropus_eugenii
ENSCHOG00000003273	-	60	84.906	ENSOPRG00000013963	-	58	84.906	Ochotona_princeps
ENSCHOG00000003273	-	84	91.667	ENSODEG00000009192	SHQ1	54	91.667	Octodon_degus
ENSCHOG00000003273	-	100	71.014	ENSOCUG00000016695	SHQ1	50	95.000	Oryctolagus_cuniculus
ENSCHOG00000003273	-	84	66.667	ENSORLG00000023538	shq1	51	66.667	Oryzias_latipes
ENSCHOG00000003273	-	84	66.667	ENSORLG00020003697	shq1	51	66.667	Oryzias_latipes_hni
ENSCHOG00000003273	-	84	65.000	ENSORLG00015021040	shq1	51	65.000	Oryzias_latipes_hsok
ENSCHOG00000003273	-	84	68.333	ENSOMEG00000001225	shq1	51	68.333	Oryzias_melastigma
ENSCHOG00000003273	-	84	95.000	ENSOGAG00000003898	SHQ1	51	95.000	Otolemur_garnettii
ENSCHOG00000003273	-	100	71.143	ENSOARG00000009547	SHQ1	50	93.333	Ovis_aries
ENSCHOG00000003273	-	99	75.439	ENSPPAG00000027714	SHQ1	62	75.439	Pan_paniscus
ENSCHOG00000003273	-	100	74.783	ENSPPRG00000004769	SHQ1	60	74.783	Panthera_pardus
ENSCHOG00000003273	-	100	67.826	ENSPTIG00000011478	SHQ1	58	67.826	Panthera_tigris_altaica
ENSCHOG00000003273	-	99	75.439	ENSPTRG00000015106	SHQ1	62	75.439	Pan_troglodytes
ENSCHOG00000003273	-	99	74.269	ENSPANG00000002881	SHQ1	62	74.269	Papio_anubis
ENSCHOG00000003273	-	99	47.813	ENSPKIG00000021517	shq1	60	47.813	Paramormyrops_kingsleyae
ENSCHOG00000003273	-	99	45.797	ENSPMGG00000008838	shq1	57	45.797	Periophthalmus_magnuspinnatus
ENSCHOG00000003273	-	100	71.014	ENSPEMG00000000251	Shq1	61	71.014	Peromyscus_maniculatus_bairdii
ENSCHOG00000003273	-	84	71.667	ENSPMAG00000005372	shq1	65	71.667	Petromyzon_marinus
ENSCHOG00000003273	-	84	65.000	ENSPFOG00000003118	shq1	63	50.000	Poecilia_formosa
ENSCHOG00000003273	-	66	58.696	ENSPMEG00000011076	shq1	56	58.696	Poecilia_mexicana
ENSCHOG00000003273	-	99	49.565	ENSPREG00000000591	shq1	65	49.565	Poecilia_reticulata
ENSCHOG00000003273	-	99	75.146	ENSPPYG00000013717	SHQ1	59	75.146	Pongo_abelii
ENSCHOG00000003273	-	84	96.667	ENSPCAG00000009035	SHQ1	51	96.667	Procavia_capensis
ENSCHOG00000003273	-	84	95.000	ENSPCOG00000008415	SHQ1	50	95.000	Propithecus_coquereli
ENSCHOG00000003273	-	84	93.333	ENSPVAG00000017392	SHQ1	51	93.333	Pteropus_vampyrus
ENSCHOG00000003273	-	100	71.594	ENSRNOG00000005433	Shq1	60	68.627	Rattus_norvegicus
ENSCHOG00000003273	-	99	66.472	ENSRBIG00000026280	SHQ1	62	66.472	Rhinopithecus_bieti
ENSCHOG00000003273	-	99	73.977	ENSRROG00000034126	SHQ1	60	73.977	Rhinopithecus_roxellana
ENSCHOG00000003273	-	84	82.759	ENSSHAG00000015077	SHQ1	51	82.759	Sarcophilus_harrisii
ENSCHOG00000003273	-	84	66.667	ENSSFOG00015016241	shq1	61	51.744	Scleropages_formosus
ENSCHOG00000003273	-	99	51.734	ENSSMAG00000016151	shq1	56	51.734	Scophthalmus_maximus
ENSCHOG00000003273	-	100	71.014	ENSSSCG00000011518	SHQ1	50	93.333	Sus_scrofa
ENSCHOG00000003273	-	84	73.333	ENSTGUG00000009933	SHQ1	51	73.333	Taeniopygia_guttata
ENSCHOG00000003273	-	99	44.798	ENSTNIG00000007354	shq1	63	65.000	Tetraodon_nigroviridis
ENSCHOG00000003273	-	84	95.000	ENSTTRG00000005320	SHQ1	50	95.000	Tursiops_truncatus
ENSCHOG00000003273	-	100	71.304	ENSUMAG00000024031	SHQ1	58	71.304	Ursus_maritimus
ENSCHOG00000003273	-	100	74.203	ENSVVUG00000013906	SHQ1	60	74.203	Vulpes_vulpes