EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000003318 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 13073 bases
Position: chrGeneScaffold_5862:8828-21900
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000002937	La	PF05383.17	4.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000003330	LARP6-201	1434	-	ENSCHOP00000002937	477 (aa)	-	UPI0001F9EA63

Gene Model

Click here to download ENSCHOG00000003318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000003318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000003318	LARP6	100	93.096	ENSG00000166173	LARP6	100	100.000	Homo_sapiens
ENSCHOG00000003318	LARP6	98	57.025	ENSAPOG00000021773	larp6a	63	59.101	Acanthochromis_polyacanthus
ENSCHOG00000003318	LARP6	90	89.953	ENSAMEG00000008897	LARP6	100	89.953	Ailuropoda_melanoleuca
ENSCHOG00000003318	LARP6	98	57.645	ENSACIG00000005166	larp6a	86	59.101	Amphilophus_citrinellus
ENSCHOG00000003318	LARP6	98	57.025	ENSAOCG00000002284	larp6a	63	59.101	Amphiprion_ocellaris
ENSCHOG00000003318	LARP6	98	57.025	ENSAPEG00000008077	larp6a	84	59.101	Amphiprion_percula
ENSCHOG00000003318	LARP6	98	56.818	ENSATEG00000004018	larp6a	62	58.202	Anabas_testudineus
ENSCHOG00000003318	LARP6	88	70.142	ENSAPLG00000009914	LARP6	99	70.142	Anas_platyrhynchos
ENSCHOG00000003318	LARP6	87	67.548	ENSACAG00000008613	LARP6	98	67.548	Anolis_carolinensis
ENSCHOG00000003318	LARP6	100	93.096	ENSANAG00000024860	LARP6	97	93.096	Aotus_nancymaae
ENSCHOG00000003318	LARP6	98	57.231	ENSACLG00000018561	larp6a	61	58.202	Astatotilapia_calliptera
ENSCHOG00000003318	LARP6	85	42.298	ENSAMXG00000036816	-	92	41.320	Astyanax_mexicanus
ENSCHOG00000003318	LARP6	90	57.111	ENSAMXG00000029387	larp6a	67	57.942	Astyanax_mexicanus
ENSCHOG00000003318	LARP6	100	91.423	ENSBTAG00000003915	LARP6	97	91.423	Bos_taurus
ENSCHOG00000003318	LARP6	100	92.259	ENSCJAG00000046236	-	97	92.259	Callithrix_jacchus
ENSCHOG00000003318	LARP6	100	92.887	ENSCJAG00000018642	-	97	92.887	Callithrix_jacchus
ENSCHOG00000003318	LARP6	89	90.330	ENSCAFG00000017616	LARP6	99	90.330	Canis_familiaris
ENSCHOG00000003318	LARP6	100	88.912	ENSCAFG00020007296	LARP6	98	89.958	Canis_lupus_dingo
ENSCHOG00000003318	LARP6	100	91.423	ENSCHIG00000013742	LARP6	97	91.423	Capra_hircus
ENSCHOG00000003318	LARP6	89	90.330	ENSTSYG00000028124	LARP6	87	90.330	Carlito_syrichta
ENSCHOG00000003318	LARP6	89	89.882	ENSCAPG00000015452	LARP6	100	89.882	Cavia_aperea
ENSCHOG00000003318	LARP6	100	89.727	ENSCPOG00000022687	LARP6	97	89.727	Cavia_porcellus
ENSCHOG00000003318	LARP6	100	92.887	ENSCCAG00000036320	LARP6	97	92.887	Cebus_capucinus
ENSCHOG00000003318	LARP6	100	93.096	ENSCATG00000042432	LARP6	97	93.096	Cercocebus_atys
ENSCHOG00000003318	LARP6	100	91.632	ENSCLAG00000007893	LARP6	97	91.632	Chinchilla_lanigera
ENSCHOG00000003318	LARP6	100	93.305	ENSCSAG00000013672	LARP6	97	93.305	Chlorocebus_sabaeus
ENSCHOG00000003318	LARP6	92	69.794	ENSCPBG00000010771	LARP6	85	69.794	Chrysemys_picta_bellii
ENSCHOG00000003318	LARP6	89	93.144	ENSCANG00000025833	LARP6	99	93.144	Colobus_angolensis_palliatus
ENSCHOG00000003318	LARP6	100	89.121	ENSCGRG00001024472	Larp6	97	89.121	Cricetulus_griseus_chok1gshd
ENSCHOG00000003318	LARP6	100	89.121	ENSCGRG00000004527	Larp6	97	89.121	Cricetulus_griseus_crigri
ENSCHOG00000003318	LARP6	98	56.936	ENSCSEG00000011196	larp6a	65	58.333	Cynoglossus_semilaevis
ENSCHOG00000003318	LARP6	90	58.744	ENSCVAG00000009605	larp6a	65	58.744	Cyprinodon_variegatus
ENSCHOG00000003318	LARP6	90	57.143	ENSDARG00000005355	larp6a	96	59.670	Danio_rerio
ENSCHOG00000003318	LARP6	100	93.501	ENSDNOG00000042993	LARP6	97	93.082	Dasypus_novemcinctus
ENSCHOG00000003318	LARP6	99	79.541	ENSDORG00000023910	Larp6	97	78.914	Dipodomys_ordii
ENSCHOG00000003318	LARP6	78	89.516	ENSETEG00000020390	LARP6	75	89.113	Echinops_telfairi
ENSCHOG00000003318	LARP6	100	93.515	ENSEASG00005005490	LARP6	71	93.515	Equus_asinus_asinus
ENSCHOG00000003318	LARP6	100	93.305	ENSECAG00000014190	LARP6	97	93.305	Equus_caballus
ENSCHOG00000003318	LARP6	90	57.942	ENSELUG00000007341	larp6a	64	57.494	Esox_lucius
ENSCHOG00000003318	LARP6	100	90.795	ENSFCAG00000001361	LARP6	97	90.795	Felis_catus
ENSCHOG00000003318	LARP6	99	64.226	ENSFALG00000012389	LARP6	99	64.435	Ficedula_albicollis
ENSCHOG00000003318	LARP6	92	90.227	ENSFDAG00000019994	LARP6	86	90.227	Fukomys_damarensis
ENSCHOG00000003318	LARP6	90	58.744	ENSFHEG00000010312	larp6a	63	58.072	Fundulus_heteroclitus
ENSCHOG00000003318	LARP6	91	69.476	ENSGALG00000004046	LARP6	89	69.476	Gallus_gallus
ENSCHOG00000003318	LARP6	90	58.744	ENSGAFG00000009426	larp6a	65	58.744	Gambusia_affinis
ENSCHOG00000003318	LARP6	88	58.810	ENSGACG00000014622	larp6a	97	57.895	Gasterosteus_aculeatus
ENSCHOG00000003318	LARP6	83	70.633	ENSGAGG00000010802	LARP6	58	70.633	Gopherus_agassizii
ENSCHOG00000003318	LARP6	89	93.144	ENSGGOG00000024151	LARP6	99	93.144	Gorilla_gorilla
ENSCHOG00000003318	LARP6	98	57.231	ENSHBUG00000021014	larp6a	61	58.202	Haplochromis_burtoni
ENSCHOG00000003318	LARP6	100	90.208	ENSHGLG00000015112	LARP6	97	90.397	Heterocephalus_glaber_female
ENSCHOG00000003318	LARP6	89	91.745	ENSHGLG00100013159	LARP6	99	91.745	Heterocephalus_glaber_male
ENSCHOG00000003318	LARP6	98	55.943	ENSHCOG00000001241	larp6a	84	58.333	Hippocampus_comes
ENSCHOG00000003318	LARP6	87	39.524	ENSIPUG00000002828	-	94	38.592	Ictalurus_punctatus
ENSCHOG00000003318	LARP6	87	58.352	ENSIPUG00000010187	larp6	65	59.122	Ictalurus_punctatus
ENSCHOG00000003318	LARP6	96	92.191	ENSSTOG00000024279	LARP6	98	92.274	Ictidomys_tridecemlineatus
ENSCHOG00000003318	LARP6	99	87.815	ENSJJAG00000011013	Larp6	98	87.815	Jaculus_jaculus
ENSCHOG00000003318	LARP6	90	59.955	ENSKMAG00000001702	larp6a	60	59.955	Kryptolebias_marmoratus
ENSCHOG00000003318	LARP6	98	54.733	ENSLBEG00000000170	larp6a	84	56.600	Labrus_bergylta
ENSCHOG00000003318	LARP6	99	63.389	ENSLACG00000018706	LARP6	89	63.389	Latimeria_chalumnae
ENSCHOG00000003318	LARP6	91	39.462	ENSLACG00000002786	-	97	43.735	Latimeria_chalumnae
ENSCHOG00000003318	LARP6	86	44.418	ENSLOCG00000008547	-	81	42.518	Lepisosteus_oculatus
ENSCHOG00000003318	LARP6	99	58.300	ENSLOCG00000014592	larp6a	66	60.706	Lepisosteus_oculatus
ENSCHOG00000003318	LARP6	94	91.499	ENSLAFG00000016343	LARP6	100	91.499	Loxodonta_africana
ENSCHOG00000003318	LARP6	94	93.333	ENSMFAG00000035507	LARP6	100	93.333	Macaca_fascicularis
ENSCHOG00000003318	LARP6	99	91.789	ENSMMUG00000004429	LARP6	98	91.579	Macaca_mulatta
ENSCHOG00000003318	LARP6	100	93.096	ENSMNEG00000045335	LARP6	97	93.096	Macaca_nemestrina
ENSCHOG00000003318	LARP6	89	93.144	ENSMLEG00000038587	LARP6	99	93.144	Mandrillus_leucophaeus
ENSCHOG00000003318	LARP6	98	56.996	ENSMAMG00000005261	larp6a	62	58.389	Mastacembelus_armatus
ENSCHOG00000003318	LARP6	98	57.231	ENSMZEG00005005774	larp6a	61	58.202	Maylandia_zebra
ENSCHOG00000003318	LARP6	88	70.309	ENSMGAG00000005077	LARP6	99	70.309	Meleagris_gallopavo
ENSCHOG00000003318	LARP6	100	88.494	ENSMAUG00000018486	Larp6	97	88.494	Mesocricetus_auratus
ENSCHOG00000003318	LARP6	100	90.776	ENSMICG00000011234	LARP6	97	90.776	Microcebus_murinus
ENSCHOG00000003318	LARP6	100	88.703	ENSMOCG00000010492	Larp6	97	88.703	Microtus_ochrogaster
ENSCHOG00000003318	LARP6	98	57.971	ENSMMOG00000016284	larp6a	85	60.135	Mola_mola
ENSCHOG00000003318	LARP6	99	74.948	ENSMODG00000009034	LARP6	93	74.739	Monodelphis_domestica
ENSCHOG00000003318	LARP6	98	57.645	ENSMALG00000014439	larp6a	84	59.326	Monopterus_albus
ENSCHOG00000003318	LARP6	99	88.889	MGP_CAROLIEiJ_G0032314	Larp6	97	88.889	Mus_caroli
ENSCHOG00000003318	LARP6	100	89.121	ENSMUSG00000034839	Larp6	97	89.308	Mus_musculus
ENSCHOG00000003318	LARP6	100	88.703	MGP_PahariEiJ_G0015180	Larp6	97	88.703	Mus_pahari
ENSCHOG00000003318	LARP6	99	88.679	MGP_SPRETEiJ_G0033452	Larp6	97	88.679	Mus_spretus
ENSCHOG00000003318	LARP6	90	90.187	ENSMPUG00000017086	LARP6	100	90.187	Mustela_putorius_furo
ENSCHOG00000003318	LARP6	100	90.377	ENSMLUG00000010319	LARP6	97	90.377	Myotis_lucifugus
ENSCHOG00000003318	LARP6	100	88.494	ENSNGAG00000014238	Larp6	97	88.494	Nannospalax_galili
ENSCHOG00000003318	LARP6	98	57.526	ENSNBRG00000008120	larp6a	84	58.969	Neolamprologus_brichardi
ENSCHOG00000003318	LARP6	100	92.678	ENSNLEG00000013691	LARP6	97	92.259	Nomascus_leucogenys
ENSCHOG00000003318	LARP6	86	75.931	ENSMEUG00000002270	LARP6	96	65.828	Notamacropus_eugenii
ENSCHOG00000003318	LARP6	74	77.273	ENSOPRG00000004868	-	100	77.273	Ochotona_princeps
ENSCHOG00000003318	LARP6	99	88.372	ENSODEG00000015958	LARP6	96	88.372	Octodon_degus
ENSCHOG00000003318	LARP6	98	57.407	ENSONIG00000002901	larp6a	84	58.837	Oreochromis_niloticus
ENSCHOG00000003318	LARP6	89	81.412	ENSOCUG00000009306	LARP6	100	81.412	Oryctolagus_cuniculus
ENSCHOG00000003318	LARP6	98	57.438	ENSORLG00000014256	larp6a	86	59.326	Oryzias_latipes
ENSCHOG00000003318	LARP6	98	57.645	ENSORLG00020019657	larp6a	63	59.685	Oryzias_latipes_hni
ENSCHOG00000003318	LARP6	98	57.438	ENSORLG00015017915	larp6a	63	59.459	Oryzias_latipes_hsok
ENSCHOG00000003318	LARP6	98	58.058	ENSOMEG00000017049	larp6a	63	60.135	Oryzias_melastigma
ENSCHOG00000003318	LARP6	100	90.586	ENSOGAG00000000522	LARP6	97	91.004	Otolemur_garnettii
ENSCHOG00000003318	LARP6	90	90.421	ENSOARG00000018750	LARP6	99	90.421	Ovis_aries
ENSCHOG00000003318	LARP6	89	93.144	ENSPPAG00000031247	LARP6	99	93.144	Pan_paniscus
ENSCHOG00000003318	LARP6	100	90.586	ENSPPRG00000011282	LARP6	97	90.586	Panthera_pardus
ENSCHOG00000003318	LARP6	89	91.017	ENSPTIG00000015318	LARP6	86	91.017	Panthera_tigris_altaica
ENSCHOG00000003318	LARP6	100	93.096	ENSPTRG00000007234	LARP6	97	93.096	Pan_troglodytes
ENSCHOG00000003318	LARP6	100	93.096	ENSPANG00000016362	LARP6	97	93.096	Papio_anubis
ENSCHOG00000003318	LARP6	98	56.646	ENSPKIG00000004511	LARP6	67	57.734	Paramormyrops_kingsleyae
ENSCHOG00000003318	LARP6	98	57.500	ENSPKIG00000020103	larp6a	85	58.797	Paramormyrops_kingsleyae
ENSCHOG00000003318	LARP6	65	79.439	ENSPSIG00000009071	LARP6	92	73.729	Pelodiscus_sinensis
ENSCHOG00000003318	LARP6	98	57.557	ENSPMGG00000006958	larp6a	86	58.784	Periophthalmus_magnuspinnatus
ENSCHOG00000003318	LARP6	99	88.679	ENSPEMG00000012909	Larp6	97	88.679	Peromyscus_maniculatus_bairdii
ENSCHOG00000003318	LARP6	99	75.833	ENSPCIG00000020765	LARP6	93	75.625	Phascolarctos_cinereus
ENSCHOG00000003318	LARP6	90	59.375	ENSPFOG00000014175	larp6a	84	59.375	Poecilia_formosa
ENSCHOG00000003318	LARP6	90	59.417	ENSPLAG00000011105	larp6a	62	59.417	Poecilia_latipinna
ENSCHOG00000003318	LARP6	90	59.193	ENSPMEG00000011085	larp6a	63	59.193	Poecilia_mexicana
ENSCHOG00000003318	LARP6	90	58.969	ENSPREG00000008067	larp6a	63	58.969	Poecilia_reticulata
ENSCHOG00000003318	LARP6	100	92.887	ENSPPYG00000006604	LARP6	97	92.887	Pongo_abelii
ENSCHOG00000003318	LARP6	67	89.820	ENSPCAG00000014197	LARP6	76	89.820	Procavia_capensis
ENSCHOG00000003318	LARP6	100	91.213	ENSPCOG00000022934	LARP6	97	91.213	Propithecus_coquereli
ENSCHOG00000003318	LARP6	100	91.632	ENSPVAG00000005618	LARP6	97	91.632	Pteropus_vampyrus
ENSCHOG00000003318	LARP6	98	57.320	ENSPNYG00000009835	larp6a	84	58.520	Pundamilia_nyererei
ENSCHOG00000003318	LARP6	90	57.047	ENSPNAG00000017966	larp6a	72	57.942	Pygocentrus_nattereri
ENSCHOG00000003318	LARP6	100	88.075	ENSRNOG00000012438	Larp6	97	88.075	Rattus_norvegicus
ENSCHOG00000003318	LARP6	100	90.208	ENSRBIG00000032902	LARP6	91	91.391	Rhinopithecus_bieti
ENSCHOG00000003318	LARP6	100	93.096	ENSRROG00000043074	LARP6	97	93.096	Rhinopithecus_roxellana
ENSCHOG00000003318	LARP6	89	92.908	ENSSBOG00000024190	LARP6	99	92.908	Saimiri_boliviensis_boliviensis
ENSCHOG00000003318	LARP6	90	74.766	ENSSHAG00000018495	LARP6	100	74.766	Sarcophilus_harrisii
ENSCHOG00000003318	LARP6	87	61.124	ENSSFOG00015023268	larp6a	82	62.061	Scleropages_formosus
ENSCHOG00000003318	LARP6	98	53.459	ENSSFOG00015002254	LARP6	80	55.660	Scleropages_formosus
ENSCHOG00000003318	LARP6	98	56.729	ENSSMAG00000009953	larp6a	62	58.108	Scophthalmus_maximus
ENSCHOG00000003318	LARP6	98	57.320	ENSSDUG00000007438	larp6a	62	58.744	Seriola_dumerili
ENSCHOG00000003318	LARP6	98	57.320	ENSSLDG00000016647	larp6a	62	58.744	Seriola_lalandi_dorsalis
ENSCHOG00000003318	LARP6	88	70.142	ENSSPUG00000011312	LARP6	99	70.142	Sphenodon_punctatus
ENSCHOG00000003318	LARP6	98	57.025	ENSSPAG00000020502	larp6a	62	59.101	Stegastes_partitus
ENSCHOG00000003318	LARP6	100	91.632	ENSSSCG00000004974	LARP6	97	91.632	Sus_scrofa
ENSCHOG00000003318	LARP6	88	69.121	ENSTGUG00000005808	LARP6	99	69.121	Taeniopygia_guttata
ENSCHOG00000003318	LARP6	98	56.468	ENSTRUG00000003151	larp6a	65	59.111	Takifugu_rubripes
ENSCHOG00000003318	LARP6	98	55.509	ENSTNIG00000011926	larp6a	88	56.787	Tetraodon_nigroviridis
ENSCHOG00000003318	LARP6	89	89.412	ENSTBEG00000015077	LARP6	100	89.412	Tupaia_belangeri
ENSCHOG00000003318	LARP6	99	81.818	ENSUAMG00000010467	LARP6	89	84.735	Ursus_americanus
ENSCHOG00000003318	LARP6	94	86.889	ENSVVUG00000015227	LARP6	99	86.889	Vulpes_vulpes
ENSCHOG00000003318	LARP6	99	66.318	ENSXETG00000020340	larp6	88	69.178	Xenopus_tropicalis
ENSCHOG00000003318	LARP6	90	58.969	ENSXCOG00000012654	larp6a	89	58.969	Xiphophorus_couchianus
ENSCHOG00000003318	LARP6	90	58.969	ENSXMAG00000021015	larp6a	60	58.969	Xiphophorus_maculatus