EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000003510 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 3652 bases
Position: chrscaffold_28623:9471-13122
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000003116	zf-RanBP	PF00641.18	9.7e-34	1	4
ENSCHOP00000003116	zf-RanBP	PF00641.18	9.7e-34	2	4
ENSCHOP00000003116	zf-RanBP	PF00641.18	9.7e-34	3	4
ENSCHOP00000003116	zf-RanBP	PF00641.18	9.7e-34	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000003526	-	3561	-	ENSCHOP00000003116	1187 (aa)	-	UPI0001F9ED09

Gene Model

Click here to download ENSCHOG00000003510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000003510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000003510	-	100	95.394	ENSCHOG00000008316	-	100	95.394
ENSCHOG00000003510	-	72	95.678	ENSCHOG00000009608	-	100	95.678
ENSCHOG00000003510	-	68	82.175	ENSCHOG00000013388	-	100	82.175
ENSCHOG00000003510	-	91	96.245	ENSCHOG00000007137	-	100	96.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000003510	-	99	60.280	ENSG00000124789	NUP153	87	60.467	Homo_sapiens
ENSCHOG00000003510	-	62	38.528	ENSAPOG00000019495	nup153	58	37.800	Acanthochromis_polyacanthus
ENSCHOG00000003510	-	95	55.669	ENSAMEG00000000721	NUP153	86	57.698	Ailuropoda_melanoleuca
ENSCHOG00000003510	-	62	40.239	ENSACIG00000010784	nup153	57	38.588	Amphilophus_citrinellus
ENSCHOG00000003510	-	62	40.000	ENSAOCG00000007098	nup153	85	34.612	Amphiprion_ocellaris
ENSCHOG00000003510	-	62	40.473	ENSAPEG00000012075	nup153	85	34.878	Amphiprion_percula
ENSCHOG00000003510	-	62	40.127	ENSATEG00000014134	nup153	85	40.633	Anabas_testudineus
ENSCHOG00000003510	-	99	41.308	ENSACAG00000004118	NUP153	89	41.577	Anolis_carolinensis
ENSCHOG00000003510	-	99	59.268	ENSANAG00000001808	NUP153	88	59.764	Aotus_nancymaae
ENSCHOG00000003510	-	62	40.407	ENSACLG00000016592	nup153	87	34.326	Astatotilapia_calliptera
ENSCHOG00000003510	-	58	36.822	ENSAMXG00000021025	nup153	86	33.063	Astyanax_mexicanus
ENSCHOG00000003510	-	99	57.964	ENSBTAG00000017128	NUP153	89	58.230	Bos_taurus
ENSCHOG00000003510	-	99	60.233	ENSCJAG00000006685	NUP153	87	60.342	Callithrix_jacchus
ENSCHOG00000003510	-	99	57.498	ENSCAFG00000010146	NUP153	94	58.544	Canis_familiaris
ENSCHOG00000003510	-	99	56.065	ENSCAFG00020010901	NUP153	87	58.664	Canis_lupus_dingo
ENSCHOG00000003510	-	99	58.152	ENSCHIG00000023764	NUP153	87	58.540	Capra_hircus
ENSCHOG00000003510	-	99	59.066	ENSTSYG00000001251	NUP153	87	59.533	Carlito_syrichta
ENSCHOG00000003510	-	69	62.040	ENSCPOG00000004007	NUP153	86	57.132	Cavia_porcellus
ENSCHOG00000003510	-	99	59.102	ENSCCAG00000024038	NUP153	92	59.086	Cebus_capucinus
ENSCHOG00000003510	-	99	60.125	ENSCATG00000041429	NUP153	87	60.311	Cercocebus_atys
ENSCHOG00000003510	-	99	58.745	ENSCLAG00000001915	NUP153	87	58.777	Chinchilla_lanigera
ENSCHOG00000003510	-	99	59.782	ENSCSAG00000007624	NUP153	87	59.626	Chlorocebus_sabaeus
ENSCHOG00000003510	-	99	46.945	ENSCPBG00000008333	NUP153	87	47.132	Chrysemys_picta_bellii
ENSCHOG00000003510	-	99	60.280	ENSCANG00000033390	NUP153	90	60.157	Colobus_angolensis_palliatus
ENSCHOG00000003510	-	99	56.016	ENSCGRG00001021016	Nup153	86	56.552	Cricetulus_griseus_chok1gshd
ENSCHOG00000003510	-	99	56.016	ENSCGRG00000009244	Nup153	89	56.552	Cricetulus_griseus_crigri
ENSCHOG00000003510	-	62	39.340	ENSCSEG00000017912	nup153	84	34.105	Cynoglossus_semilaevis
ENSCHOG00000003510	-	99	61.634	ENSDNOG00000001153	NUP153	87	61.946	Dasypus_novemcinctus
ENSCHOG00000003510	-	69	65.094	ENSDORG00000001736	Nup153	87	59.550	Dipodomys_ordii
ENSCHOG00000003510	-	76	47.477	ENSETEG00000010324	-	63	48.224	Echinops_telfairi
ENSCHOG00000003510	-	99	59.611	ENSEASG00005009945	NUP153	88	59.533	Equus_asinus_asinus
ENSCHOG00000003510	-	99	59.455	ENSECAG00000016010	NUP153	87	59.455	Equus_caballus
ENSCHOG00000003510	-	78	62.085	ENSEEUG00000010183	NUP153	67	62.085	Erinaceus_europaeus
ENSCHOG00000003510	-	63	39.015	ENSELUG00000019108	nup153	58	38.330	Esox_lucius
ENSCHOG00000003510	-	99	56.512	ENSFCAG00000011583	NUP153	87	57.242	Felis_catus
ENSCHOG00000003510	-	99	42.257	ENSFALG00000013388	NUP153	91	42.624	Ficedula_albicollis
ENSCHOG00000003510	-	59	38.852	ENSGMOG00000010422	nup153	60	36.895	Gadus_morhua
ENSCHOG00000003510	-	99	45.270	ENSGALG00000012720	NUP153	86	45.817	Gallus_gallus
ENSCHOG00000003510	-	62	39.697	ENSGAFG00000010927	nup153	71	36.322	Gambusia_affinis
ENSCHOG00000003510	-	65	39.588	ENSGACG00000005389	nup153	85	39.524	Gasterosteus_aculeatus
ENSCHOG00000003510	-	98	45.672	ENSGAGG00000022386	NUP153	87	47.018	Gopherus_agassizii
ENSCHOG00000003510	-	99	60.047	ENSGGOG00000014261	NUP153	86	60.236	Gorilla_gorilla
ENSCHOG00000003510	-	62	40.127	ENSHBUG00000002944	nup153	85	33.831	Haplochromis_burtoni
ENSCHOG00000003510	-	99	53.082	ENSHGLG00000007924	NUP153	86	57.722	Heterocephalus_glaber_female
ENSCHOG00000003510	-	99	53.082	ENSHGLG00100001529	NUP153	86	57.722	Heterocephalus_glaber_male
ENSCHOG00000003510	-	62	39.433	ENSHCOG00000019361	nup153	56	37.385	Hippocampus_comes
ENSCHOG00000003510	-	99	59.651	ENSSTOG00000005807	NUP153	88	59.921	Ictidomys_tridecemlineatus
ENSCHOG00000003510	-	99	54.190	ENSJJAG00000016760	Nup153	86	55.121	Jaculus_jaculus
ENSCHOG00000003510	-	62	38.861	ENSKMAG00000006344	nup153	58	38.695	Kryptolebias_marmoratus
ENSCHOG00000003510	-	68	37.326	ENSLACG00000006480	NUP153	89	34.812	Latimeria_chalumnae
ENSCHOG00000003510	-	67	42.014	ENSLOCG00000008267	nup153	86	38.380	Lepisosteus_oculatus
ENSCHOG00000003510	-	99	56.438	ENSLAFG00000015905	NUP153	86	59.783	Loxodonta_africana
ENSCHOG00000003510	-	99	60.202	ENSMFAG00000045732	NUP153	87	60.311	Macaca_fascicularis
ENSCHOG00000003510	-	99	60.125	ENSMMUG00000001993	NUP153	87	60.311	Macaca_mulatta
ENSCHOG00000003510	-	99	60.202	ENSMNEG00000038011	NUP153	87	60.389	Macaca_nemestrina
ENSCHOG00000003510	-	99	60.125	ENSMLEG00000030776	NUP153	89	59.892	Mandrillus_leucophaeus
ENSCHOG00000003510	-	62	39.700	ENSMAMG00000013184	nup153	50	40.503	Mastacembelus_armatus
ENSCHOG00000003510	-	62	39.947	ENSMZEG00005004371	nup153	85	33.537	Maylandia_zebra
ENSCHOG00000003510	-	99	44.253	ENSMGAG00000003139	NUP153	88	44.366	Meleagris_gallopavo
ENSCHOG00000003510	-	93	55.034	ENSMAUG00000007737	Nup153	84	55.452	Mesocricetus_auratus
ENSCHOG00000003510	-	99	60.374	ENSMICG00000006089	NUP153	87	60.296	Microcebus_murinus
ENSCHOG00000003510	-	99	56.059	ENSMOCG00000007623	Nup153	86	55.825	Microtus_ochrogaster
ENSCHOG00000003510	-	57	39.112	ENSMMOG00000019049	nup153	50	39.398	Mola_mola
ENSCHOG00000003510	-	69	55.674	ENSMODG00000010951	NUP153	88	50.232	Monodelphis_domestica
ENSCHOG00000003510	-	62	38.622	ENSMALG00000013995	nup153	85	34.046	Monopterus_albus
ENSCHOG00000003510	-	99	56.191	MGP_CAROLIEiJ_G0018483	Nup153	86	56.583	Mus_caroli
ENSCHOG00000003510	-	99	56.672	ENSMUSG00000021374	Nup153	87	65.000	Mus_musculus
ENSCHOG00000003510	-	99	56.583	MGP_PahariEiJ_G0019551	Nup153	86	56.818	Mus_pahari
ENSCHOG00000003510	-	99	56.627	MGP_SPRETEiJ_G0019363	Nup153	86	56.863	Mus_spretus
ENSCHOG00000003510	-	99	57.035	ENSMLUG00000004775	NUP153	87	56.732	Myotis_lucifugus
ENSCHOG00000003510	-	99	57.109	ENSNGAG00000013817	Nup153	86	57.109	Nannospalax_galili
ENSCHOG00000003510	-	62	39.286	ENSNBRG00000012456	nup153	85	33.664	Neolamprologus_brichardi
ENSCHOG00000003510	-	99	60.545	ENSNLEG00000001141	NUP153	87	60.731	Nomascus_leucogenys
ENSCHOG00000003510	-	86	58.163	ENSMEUG00000012874	NUP153	72	58.163	Notamacropus_eugenii
ENSCHOG00000003510	-	84	58.629	ENSOPRG00000006221	NUP153	71	59.338	Ochotona_princeps
ENSCHOG00000003510	-	99	53.411	ENSODEG00000005620	NUP153	90	53.458	Octodon_degus
ENSCHOG00000003510	-	62	39.547	ENSONIG00000002524	nup153	58	38.926	Oreochromis_niloticus
ENSCHOG00000003510	-	99	44.641	ENSOANG00000011858	NUP153	88	46.195	Ornithorhynchus_anatinus
ENSCHOG00000003510	-	99	56.586	ENSOCUG00000003064	NUP153	87	57.054	Oryctolagus_cuniculus
ENSCHOG00000003510	-	62	39.451	ENSORLG00000012674	nup153	91	33.807	Oryzias_latipes
ENSCHOG00000003510	-	62	39.152	ENSORLG00020006026	nup153	85	33.831	Oryzias_latipes_hni
ENSCHOG00000003510	-	62	39.401	ENSORLG00015013823	nup153	85	34.753	Oryzias_latipes_hsok
ENSCHOG00000003510	-	62	39.417	ENSOMEG00000012062	nup153	85	34.152	Oryzias_melastigma
ENSCHOG00000003510	-	99	58.055	ENSOGAG00000014899	NUP153	87	58.207	Otolemur_garnettii
ENSCHOG00000003510	-	99	57.870	ENSOARG00000011514	NUP153	88	57.903	Ovis_aries
ENSCHOG00000003510	-	99	60.202	ENSPPAG00000029729	NUP153	87	60.389	Pan_paniscus
ENSCHOG00000003510	-	99	56.589	ENSPPRG00000006160	NUP153	87	57.242	Panthera_pardus
ENSCHOG00000003510	-	99	56.124	ENSPTIG00000017212	NUP153	87	56.778	Panthera_tigris_altaica
ENSCHOG00000003510	-	99	60.280	ENSPTRG00000017752	NUP153	87	60.467	Pan_troglodytes
ENSCHOG00000003510	-	99	59.969	ENSPANG00000015139	NUP153	87	60.156	Papio_anubis
ENSCHOG00000003510	-	65	37.500	ENSPKIG00000001734	nup153	69	34.296	Paramormyrops_kingsleyae
ENSCHOG00000003510	-	99	46.267	ENSPSIG00000017226	NUP153	89	46.423	Pelodiscus_sinensis
ENSCHOG00000003510	-	61	38.542	ENSPMGG00000001716	nup153	59	38.567	Periophthalmus_magnuspinnatus
ENSCHOG00000003510	-	99	56.831	ENSPEMG00000020772	Nup153	86	56.708	Peromyscus_maniculatus_bairdii
ENSCHOG00000003510	-	59	32.850	ENSPMAG00000002487	-	84	32.850	Petromyzon_marinus
ENSCHOG00000003510	-	99	47.460	ENSPCIG00000029680	NUP153	87	50.499	Phascolarctos_cinereus
ENSCHOG00000003510	-	62	40.629	ENSPFOG00000013146	nup153	85	34.739	Poecilia_formosa
ENSCHOG00000003510	-	66	38.290	ENSPMEG00000021677	nup153	85	34.240	Poecilia_mexicana
ENSCHOG00000003510	-	66	38.771	ENSPREG00000007463	nup153	78	34.488	Poecilia_reticulata
ENSCHOG00000003510	-	99	57.989	ENSPPYG00000016259	NUP153	86	57.833	Pongo_abelii
ENSCHOG00000003510	-	76	71.429	ENSPCAG00000010444	NUP153	66	71.429	Procavia_capensis
ENSCHOG00000003510	-	99	58.034	ENSPCOG00000014488	NUP153	86	58.034	Propithecus_coquereli
ENSCHOG00000003510	-	98	57.506	ENSPVAG00000012632	NUP153	90	57.671	Pteropus_vampyrus
ENSCHOG00000003510	-	62	40.382	ENSPNYG00000011225	nup153	57	39.322	Pundamilia_nyererei
ENSCHOG00000003510	-	63	39.286	ENSPNAG00000024377	nup153	53	39.653	Pygocentrus_nattereri
ENSCHOG00000003510	-	99	55.668	ENSRNOG00000001456	Nup153	86	55.747	Rattus_norvegicus
ENSCHOG00000003510	-	99	59.311	ENSRBIG00000041878	NUP153	87	58.998	Rhinopithecus_bieti
ENSCHOG00000003510	-	99	60.094	ENSRROG00000029849	NUP153	88	59.782	Rhinopithecus_roxellana
ENSCHOG00000003510	-	99	60.467	ENSSBOG00000024532	NUP153	87	60.514	Saimiri_boliviensis_boliviensis
ENSCHOG00000003510	-	70	46.831	ENSSHAG00000016087	-	97	46.479	Sarcophilus_harrisii
ENSCHOG00000003510	-	60	39.920	ENSSFOG00015011040	nup153	52	39.951	Scleropages_formosus
ENSCHOG00000003510	-	62	38.910	ENSSMAG00000008418	nup153	54	38.621	Scophthalmus_maximus
ENSCHOG00000003510	-	62	39.559	ENSSDUG00000010779	nup153	57	38.799	Seriola_dumerili
ENSCHOG00000003510	-	62	39.355	ENSSLDG00000012692	nup153	70	35.436	Seriola_lalandi_dorsalis
ENSCHOG00000003510	-	99	51.684	ENSSARG00000013269	NUP153	89	51.605	Sorex_araneus
ENSCHOG00000003510	-	99	45.914	ENSSPUG00000016687	NUP153	86	46.298	Sphenodon_punctatus
ENSCHOG00000003510	-	62	38.356	ENSSPAG00000014945	nup153	57	37.196	Stegastes_partitus
ENSCHOG00000003510	-	99	59.502	ENSSSCG00000026034	NUP153	87	59.502	Sus_scrofa
ENSCHOG00000003510	-	99	41.654	ENSTGUG00000005917	NUP153	89	42.245	Taeniopygia_guttata
ENSCHOG00000003510	-	62	38.718	ENSTRUG00000010163	nup153	57	37.429	Takifugu_rubripes
ENSCHOG00000003510	-	62	38.783	ENSTNIG00000009182	nup153	52	38.938	Tetraodon_nigroviridis
ENSCHOG00000003510	-	67	59.701	ENSTBEG00000004161	NUP153	56	59.701	Tupaia_belangeri
ENSCHOG00000003510	-	94	56.040	ENSTTRG00000007060	NUP153	76	56.040	Tursiops_truncatus
ENSCHOG00000003510	-	63	51.625	ENSUAMG00000015215	NUP153	89	54.248	Ursus_americanus
ENSCHOG00000003510	-	99	55.789	ENSUMAG00000017135	NUP153	88	55.711	Ursus_maritimus
ENSCHOG00000003510	-	99	60.358	ENSVPAG00000002072	NUP153	87	60.233	Vicugna_pacos
ENSCHOG00000003510	-	99	53.917	ENSVVUG00000003265	NUP153	94	58.465	Vulpes_vulpes
ENSCHOG00000003510	-	99	36.834	ENSXETG00000014197	nup153	86	36.392	Xenopus_tropicalis
ENSCHOG00000003510	-	64	38.547	ENSXCOG00000020098	nup153	71	36.220	Xiphophorus_couchianus
ENSCHOG00000003510	-	83	35.018	ENSXMAG00000003437	nup153	71	36.182	Xiphophorus_maculatus