EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000003795 (Gene tree)
Gene ID: -
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 4422 bases
Position: chrGeneScaffold_2977:2559-6980
Accession: 19440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000003352	SBDS	PF01172.18	3.4e-33	1	1
ENSCHOP00000003352	SBDS_C	PF09377.10	5.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000003806	SBDS-201	750	-	ENSCHOP00000003352	249 (aa)	-	UPI0001F9EB49

Gene Model

Click here to download ENSCHOG00000003795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000003795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000003795	SBDS	100	94.400	ENSG00000126524	SBDS	97	100.000	Homo_sapiens
ENSCHOG00000003795	SBDS	99	78.313	ENSAPOG00000014285	sbds	100	78.313	Acanthochromis_polyacanthus
ENSCHOG00000003795	SBDS	100	94.000	ENSAMEG00000018167	SBDS	100	94.000	Ailuropoda_melanoleuca
ENSCHOG00000003795	SBDS	99	77.778	ENSACIG00000007308	sbds	100	77.778	Amphilophus_citrinellus
ENSCHOG00000003795	SBDS	99	78.313	ENSAOCG00000016770	sbds	100	78.313	Amphiprion_ocellaris
ENSCHOG00000003795	SBDS	99	78.715	ENSAPEG00000015897	sbds	100	78.715	Amphiprion_percula
ENSCHOG00000003795	SBDS	99	78.715	ENSATEG00000006901	sbds	100	78.715	Anabas_testudineus
ENSCHOG00000003795	SBDS	83	92.754	ENSANAG00000037501	-	100	92.754	Aotus_nancymaae
ENSCHOG00000003795	SBDS	92	87.446	ENSANAG00000024342	-	97	87.446	Aotus_nancymaae
ENSCHOG00000003795	SBDS	99	79.116	ENSACLG00000018750	sbds	100	79.116	Astatotilapia_calliptera
ENSCHOG00000003795	SBDS	100	79.600	ENSAMXG00000005361	sbds	100	79.600	Astyanax_mexicanus
ENSCHOG00000003795	SBDS	100	93.600	ENSBTAG00000004051	SBDS	100	93.600	Bos_taurus
ENSCHOG00000003795	SBDS	98	53.659	WBGene00021063	sbds-1	97	53.659	Caenorhabditis_elegans
ENSCHOG00000003795	SBDS	100	93.200	ENSCJAG00000041007	SBDS	100	93.200	Callithrix_jacchus
ENSCHOG00000003795	SBDS	100	91.270	ENSCAFG00000010797	SBDS	100	91.270	Canis_familiaris
ENSCHOG00000003795	SBDS	100	93.600	ENSCAFG00020005357	SBDS	100	93.600	Canis_lupus_dingo
ENSCHOG00000003795	SBDS	100	94.400	ENSCHIG00000026854	SBDS	100	94.400	Capra_hircus
ENSCHOG00000003795	SBDS	100	94.400	ENSTSYG00000033822	SBDS	100	94.400	Carlito_syrichta
ENSCHOG00000003795	SBDS	65	90.854	ENSCAPG00000006634	SBDS	100	90.854	Cavia_aperea
ENSCHOG00000003795	SBDS	100	94.000	ENSCPOG00000036143	SBDS	100	94.000	Cavia_porcellus
ENSCHOG00000003795	SBDS	100	94.000	ENSCCAG00000020671	SBDS	100	94.000	Cebus_capucinus
ENSCHOG00000003795	SBDS	100	94.400	ENSCATG00000039026	SBDS	100	94.400	Cercocebus_atys
ENSCHOG00000003795	SBDS	99	68.016	ENSCLAG00000002113	-	99	68.016	Chinchilla_lanigera
ENSCHOG00000003795	SBDS	100	93.600	ENSCLAG00000005721	-	100	93.600	Chinchilla_lanigera
ENSCHOG00000003795	SBDS	100	94.400	ENSCSAG00000018275	SBDS	100	94.400	Chlorocebus_sabaeus
ENSCHOG00000003795	SBDS	100	84.800	ENSCPBG00000014893	SBDS	100	84.800	Chrysemys_picta_bellii
ENSCHOG00000003795	SBDS	99	63.600	ENSCSAVG00000011811	-	100	63.600	Ciona_savignyi
ENSCHOG00000003795	SBDS	100	94.000	ENSCANG00000032368	SBDS	100	94.000	Colobus_angolensis_palliatus
ENSCHOG00000003795	SBDS	65	88.415	ENSCGRG00001019886	Sbds	100	88.415	Cricetulus_griseus_chok1gshd
ENSCHOG00000003795	SBDS	83	90.821	ENSCGRG00000009211	Sbds	100	90.821	Cricetulus_griseus_crigri
ENSCHOG00000003795	SBDS	99	76.707	ENSCSEG00000005798	sbds	100	76.707	Cynoglossus_semilaevis
ENSCHOG00000003795	SBDS	99	76.707	ENSCVAG00000001053	sbds	100	76.707	Cyprinodon_variegatus
ENSCHOG00000003795	SBDS	100	79.600	ENSDARG00000027803	sbds	100	79.600	Danio_rerio
ENSCHOG00000003795	SBDS	100	94.000	ENSDNOG00000041174	SBDS	100	94.000	Dasypus_novemcinctus
ENSCHOG00000003795	SBDS	100	91.600	ENSDORG00000026218	Sbds	100	91.600	Dipodomys_ordii
ENSCHOG00000003795	SBDS	90	55.263	FBgn0035714	CG8549	99	55.823	Drosophila_melanogaster
ENSCHOG00000003795	SBDS	93	54.506	ENSEBUG00000015780	sbds	100	54.506	Eptatretus_burgeri
ENSCHOG00000003795	SBDS	100	94.800	ENSEASG00005008821	SBDS	100	94.800	Equus_asinus_asinus
ENSCHOG00000003795	SBDS	100	94.800	ENSECAG00000008202	SBDS	100	94.800	Equus_caballus
ENSCHOG00000003795	SBDS	83	70.192	ENSEEUG00000004768	SBDS	100	70.192	Erinaceus_europaeus
ENSCHOG00000003795	SBDS	100	77.200	ENSELUG00000008382	sbds	100	77.200	Esox_lucius
ENSCHOG00000003795	SBDS	100	94.400	ENSFCAG00000022142	SBDS	100	94.400	Felis_catus
ENSCHOG00000003795	SBDS	100	84.400	ENSFALG00000013808	SBDS	100	84.400	Ficedula_albicollis
ENSCHOG00000003795	SBDS	100	94.000	ENSFDAG00000018947	-	100	94.000	Fukomys_damarensis
ENSCHOG00000003795	SBDS	99	73.896	ENSFHEG00000000708	sbds	100	73.896	Fundulus_heteroclitus
ENSCHOG00000003795	SBDS	100	79.200	ENSGMOG00000018356	sbds	99	79.200	Gadus_morhua
ENSCHOG00000003795	SBDS	100	84.400	ENSGALG00000027989	SBDS	100	84.400	Gallus_gallus
ENSCHOG00000003795	SBDS	92	73.043	ENSGAFG00000014204	sbds	100	73.043	Gambusia_affinis
ENSCHOG00000003795	SBDS	99	77.510	ENSGACG00000012697	sbds	100	77.510	Gasterosteus_aculeatus
ENSCHOG00000003795	SBDS	86	84.112	ENSGAGG00000022402	SBDS	100	84.112	Gopherus_agassizii
ENSCHOG00000003795	SBDS	96	74.689	ENSGGOG00000040023	-	92	74.689	Gorilla_gorilla
ENSCHOG00000003795	SBDS	99	79.116	ENSHBUG00000002660	sbds	100	79.116	Haplochromis_burtoni
ENSCHOG00000003795	SBDS	100	92.400	ENSHGLG00000009671	SBDS	100	92.400	Heterocephalus_glaber_female
ENSCHOG00000003795	SBDS	100	92.400	ENSHGLG00100011332	SBDS	100	92.400	Heterocephalus_glaber_male
ENSCHOG00000003795	SBDS	99	76.707	ENSHCOG00000018606	sbds	100	76.707	Hippocampus_comes
ENSCHOG00000003795	SBDS	100	80.800	ENSIPUG00000006536	sbds	100	80.800	Ictalurus_punctatus
ENSCHOG00000003795	SBDS	100	89.200	ENSJJAG00000012033	-	100	89.200	Jaculus_jaculus
ENSCHOG00000003795	SBDS	100	69.841	ENSJJAG00000003934	-	100	70.238	Jaculus_jaculus
ENSCHOG00000003795	SBDS	99	78.715	ENSKMAG00000018542	sbds	100	78.715	Kryptolebias_marmoratus
ENSCHOG00000003795	SBDS	99	76.305	ENSLBEG00000016687	sbds	100	76.305	Labrus_bergylta
ENSCHOG00000003795	SBDS	100	65.748	ENSLACG00000018916	SBDS	100	65.748	Latimeria_chalumnae
ENSCHOG00000003795	SBDS	100	82.800	ENSLOCG00000004073	sbds	100	82.800	Lepisosteus_oculatus
ENSCHOG00000003795	SBDS	100	92.800	ENSLAFG00000008763	SBDS	100	92.800	Loxodonta_africana
ENSCHOG00000003795	SBDS	100	94.400	ENSMFAG00000032620	SBDS	100	94.400	Macaca_fascicularis
ENSCHOG00000003795	SBDS	100	94.400	ENSMMUG00000045653	SBDS	100	94.400	Macaca_mulatta
ENSCHOG00000003795	SBDS	100	94.400	ENSMNEG00000031523	SBDS	100	94.400	Macaca_nemestrina
ENSCHOG00000003795	SBDS	100	71.654	ENSMLEG00000036826	SBDS	100	71.654	Mandrillus_leucophaeus
ENSCHOG00000003795	SBDS	99	78.715	ENSMAMG00000016062	sbds	100	78.715	Mastacembelus_armatus
ENSCHOG00000003795	SBDS	99	79.116	ENSMZEG00005024385	sbds	100	79.116	Maylandia_zebra
ENSCHOG00000003795	SBDS	100	84.400	ENSMGAG00000002119	SBDS	100	84.400	Meleagris_gallopavo
ENSCHOG00000003795	SBDS	99	72.691	ENSMAUG00000022214	-	100	72.691	Mesocricetus_auratus
ENSCHOG00000003795	SBDS	100	94.400	ENSMICG00000014366	SBDS	100	94.400	Microcebus_murinus
ENSCHOG00000003795	SBDS	100	93.200	ENSMOCG00000011739	Sbds	100	93.200	Microtus_ochrogaster
ENSCHOG00000003795	SBDS	99	69.200	ENSMMOG00000005061	sbds	100	68.800	Mola_mola
ENSCHOG00000003795	SBDS	100	91.600	ENSMODG00000006644	SBDS	100	91.600	Monodelphis_domestica
ENSCHOG00000003795	SBDS	99	78.313	ENSMALG00000010219	sbds	100	78.313	Monopterus_albus
ENSCHOG00000003795	SBDS	100	93.200	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSCHOG00000003795	SBDS	100	92.800	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSCHOG00000003795	SBDS	100	92.800	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSCHOG00000003795	SBDS	100	92.800	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSCHOG00000003795	SBDS	67	85.714	ENSMPUG00000016192	SBDS	97	85.714	Mustela_putorius_furo
ENSCHOG00000003795	SBDS	73	90.659	ENSMLUG00000013575	SBDS	100	90.659	Myotis_lucifugus
ENSCHOG00000003795	SBDS	100	93.200	ENSNGAG00000012093	Sbds	100	93.200	Nannospalax_galili
ENSCHOG00000003795	SBDS	99	79.116	ENSNBRG00000017027	sbds	100	79.116	Neolamprologus_brichardi
ENSCHOG00000003795	SBDS	100	94.400	ENSNLEG00000013288	SBDS	100	94.400	Nomascus_leucogenys
ENSCHOG00000003795	SBDS	100	91.200	ENSOPRG00000008721	SBDS	100	91.200	Ochotona_princeps
ENSCHOG00000003795	SBDS	99	68.273	ENSODEG00000000137	-	85	71.600	Octodon_degus
ENSCHOG00000003795	SBDS	100	83.600	ENSODEG00000019253	-	84	83.600	Octodon_degus
ENSCHOG00000003795	SBDS	99	75.000	ENSODEG00000001116	-	99	75.000	Octodon_degus
ENSCHOG00000003795	SBDS	99	78.313	ENSONIG00000005874	sbds	100	78.313	Oreochromis_niloticus
ENSCHOG00000003795	SBDS	83	86.473	ENSOANG00000007674	-	100	86.473	Ornithorhynchus_anatinus
ENSCHOG00000003795	SBDS	100	92.000	ENSOCUG00000003170	SBDS	100	92.000	Oryctolagus_cuniculus
ENSCHOG00000003795	SBDS	99	75.502	ENSORLG00000023489	sbds	100	75.502	Oryzias_latipes
ENSCHOG00000003795	SBDS	99	75.502	ENSORLG00020019282	sbds	100	75.502	Oryzias_latipes_hni
ENSCHOG00000003795	SBDS	99	75.502	ENSORLG00015008005	sbds	100	75.502	Oryzias_latipes_hsok
ENSCHOG00000003795	SBDS	99	76.305	ENSOMEG00000022747	sbds	100	76.305	Oryzias_melastigma
ENSCHOG00000003795	SBDS	100	94.000	ENSOGAG00000009011	-	100	94.000	Otolemur_garnettii
ENSCHOG00000003795	SBDS	100	78.400	ENSOGAG00000015036	-	100	78.400	Otolemur_garnettii
ENSCHOG00000003795	SBDS	100	94.400	ENSOARG00000010609	SBDS	100	94.400	Ovis_aries
ENSCHOG00000003795	SBDS	100	93.600	ENSPPAG00000043889	-	100	93.600	Pan_paniscus
ENSCHOG00000003795	SBDS	100	94.400	ENSPPRG00000002307	SBDS	100	94.400	Panthera_pardus
ENSCHOG00000003795	SBDS	100	94.400	ENSPTIG00000021308	SBDS	100	94.400	Panthera_tigris_altaica
ENSCHOG00000003795	SBDS	100	80.400	ENSPTRG00000050835	-	100	80.400	Pan_troglodytes
ENSCHOG00000003795	SBDS	100	80.000	ENSPTRG00000047744	-	100	80.000	Pan_troglodytes
ENSCHOG00000003795	SBDS	100	94.400	ENSPTRG00000019254	SBDS	100	94.400	Pan_troglodytes
ENSCHOG00000003795	SBDS	87	90.783	ENSPTRG00000048174	-	96	90.783	Pan_troglodytes
ENSCHOG00000003795	SBDS	100	94.000	ENSPANG00000004078	SBDS	100	94.000	Papio_anubis
ENSCHOG00000003795	SBDS	100	79.600	ENSPKIG00000006489	sbds	100	79.600	Paramormyrops_kingsleyae
ENSCHOG00000003795	SBDS	83	84.541	ENSPSIG00000014603	SBDS	99	84.541	Pelodiscus_sinensis
ENSCHOG00000003795	SBDS	99	77.510	ENSPMGG00000004246	sbds	100	77.510	Periophthalmus_magnuspinnatus
ENSCHOG00000003795	SBDS	100	92.800	ENSPEMG00000008728	Sbds	100	92.800	Peromyscus_maniculatus_bairdii
ENSCHOG00000003795	SBDS	100	90.400	ENSPCIG00000029718	SBDS	100	90.400	Phascolarctos_cinereus
ENSCHOG00000003795	SBDS	99	75.904	ENSPFOG00000015837	sbds	100	75.904	Poecilia_formosa
ENSCHOG00000003795	SBDS	99	75.904	ENSPLAG00000003641	sbds	100	75.904	Poecilia_latipinna
ENSCHOG00000003795	SBDS	99	75.904	ENSPMEG00000019483	sbds	100	75.904	Poecilia_mexicana
ENSCHOG00000003795	SBDS	99	75.904	ENSPREG00000018758	sbds	100	75.904	Poecilia_reticulata
ENSCHOG00000003795	SBDS	100	94.400	ENSPPYG00000017513	SBDS	100	94.400	Pongo_abelii
ENSCHOG00000003795	SBDS	100	94.400	ENSPCOG00000021098	SBDS	100	94.400	Propithecus_coquereli
ENSCHOG00000003795	SBDS	100	94.400	ENSPVAG00000009369	SBDS	100	94.400	Pteropus_vampyrus
ENSCHOG00000003795	SBDS	99	78.715	ENSPNYG00000022403	sbds	100	78.715	Pundamilia_nyererei
ENSCHOG00000003795	SBDS	100	80.800	ENSPNAG00000001120	sbds	100	80.800	Pygocentrus_nattereri
ENSCHOG00000003795	SBDS	100	92.800	ENSRNOG00000000888	Sbds	100	92.800	Rattus_norvegicus
ENSCHOG00000003795	SBDS	100	94.400	ENSRBIG00000035557	SBDS	100	94.400	Rhinopithecus_bieti
ENSCHOG00000003795	SBDS	100	77.108	ENSRROG00000041986	-	100	74.699	Rhinopithecus_roxellana
ENSCHOG00000003795	SBDS	100	94.400	ENSRROG00000040842	-	100	94.400	Rhinopithecus_roxellana
ENSCHOG00000003795	SBDS	96	41.633	YLR022C	-	96	40.891	Saccharomyces_cerevisiae
ENSCHOG00000003795	SBDS	93	93.103	ENSSBOG00000022460	SBDS	100	93.103	Saimiri_boliviensis_boliviensis
ENSCHOG00000003795	SBDS	100	78.000	ENSSHAG00000010263	SBDS	100	78.000	Sarcophilus_harrisii
ENSCHOG00000003795	SBDS	100	80.800	ENSSFOG00015001108	sbds	100	80.800	Scleropages_formosus
ENSCHOG00000003795	SBDS	99	79.116	ENSSMAG00000020506	sbds	100	79.116	Scophthalmus_maximus
ENSCHOG00000003795	SBDS	99	77.912	ENSSDUG00000001528	sbds	100	77.912	Seriola_dumerili
ENSCHOG00000003795	SBDS	99	78.313	ENSSLDG00000003659	sbds	100	78.313	Seriola_lalandi_dorsalis
ENSCHOG00000003795	SBDS	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSCHOG00000003795	SBDS	56	97.872	ENSSARG00000013132	-	92	97.872	Sorex_araneus
ENSCHOG00000003795	SBDS	100	82.400	ENSSPUG00000002699	SBDS	100	82.400	Sphenodon_punctatus
ENSCHOG00000003795	SBDS	99	78.313	ENSSPAG00000016419	sbds	100	70.800	Stegastes_partitus
ENSCHOG00000003795	SBDS	100	94.000	ENSSSCG00000007732	SBDS	100	94.000	Sus_scrofa
ENSCHOG00000003795	SBDS	66	81.818	ENSTGUG00000003426	SBDS	99	81.818	Taeniopygia_guttata
ENSCHOG00000003795	SBDS	99	78.715	ENSTRUG00000021443	sbds	100	78.715	Takifugu_rubripes
ENSCHOG00000003795	SBDS	99	77.510	ENSTNIG00000019000	sbds	100	77.510	Tetraodon_nigroviridis
ENSCHOG00000003795	SBDS	83	86.957	ENSTBEG00000001178	SBDS	100	86.957	Tupaia_belangeri
ENSCHOG00000003795	SBDS	100	83.600	ENSTTRG00000003921	SBDS	100	83.600	Tursiops_truncatus
ENSCHOG00000003795	SBDS	100	94.000	ENSUAMG00000001326	SBDS	100	94.000	Ursus_americanus
ENSCHOG00000003795	SBDS	100	94.000	ENSUMAG00000015353	SBDS	100	94.000	Ursus_maritimus
ENSCHOG00000003795	SBDS	100	93.600	ENSVVUG00000016478	SBDS	100	93.600	Vulpes_vulpes
ENSCHOG00000003795	SBDS	100	82.000	ENSXETG00000010093	sbds	100	82.000	Xenopus_tropicalis
ENSCHOG00000003795	SBDS	99	68.675	ENSXCOG00000010639	sbds	100	68.675	Xiphophorus_couchianus
ENSCHOG00000003795	SBDS	99	76.305	ENSXMAG00000006065	sbds	100	76.305	Xiphophorus_maculatus