EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000003805 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 123592 bases
Position: chrGeneScaffold_598:2930-126521
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000003369	S1	PF00575.23	6.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000003825	SRBD1-201	2976	-	ENSCHOP00000003369	991 (aa)	-	UPI0001F9EB99

Gene Model

Click here to download ENSCHOG00000003805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000003805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000003805	SRBD1	93	75.878	ENSG00000068784	SRBD1	93	75.878	Homo_sapiens
ENSCHOG00000003805	SRBD1	86	65.306	ENSAPOG00000005103	si:ch211-117n7.8	82	65.306	Acanthochromis_polyacanthus
ENSCHOG00000003805	SRBD1	87	94.268	ENSAMEG00000005993	SRBD1	87	94.268	Ailuropoda_melanoleuca
ENSCHOG00000003805	SRBD1	69	72.093	ENSACIG00000009875	si:ch211-117n7.8	83	72.093	Amphilophus_citrinellus
ENSCHOG00000003805	SRBD1	86	66.000	ENSAOCG00000024718	si:ch211-117n7.8	82	66.000	Amphiprion_ocellaris
ENSCHOG00000003805	SRBD1	82	64.000	ENSAPEG00000002645	si:ch211-117n7.8	84	64.000	Amphiprion_percula
ENSCHOG00000003805	SRBD1	70	69.388	ENSATEG00000010844	si:ch211-117n7.8	71	69.388	Anabas_testudineus
ENSCHOG00000003805	SRBD1	93	61.481	ENSAPLG00000006313	SRBD1	93	61.481	Anas_platyrhynchos
ENSCHOG00000003805	SRBD1	93	76.641	ENSANAG00000025573	SRBD1	93	76.641	Aotus_nancymaae
ENSCHOG00000003805	SRBD1	82	74.419	ENSACLG00000024219	si:ch211-117n7.8	81	74.419	Astatotilapia_calliptera
ENSCHOG00000003805	SRBD1	72	70.000	ENSAMXG00000004294	SRBD1	81	70.000	Astyanax_mexicanus
ENSCHOG00000003805	SRBD1	87	94.904	ENSBTAG00000007508	SRBD1	92	94.904	Bos_taurus
ENSCHOG00000003805	SRBD1	93	76.489	ENSCJAG00000000727	SRBD1	93	76.489	Callithrix_jacchus
ENSCHOG00000003805	SRBD1	87	94.118	ENSCAFG00000002554	SRBD1	87	94.118	Canis_familiaris
ENSCHOG00000003805	SRBD1	83	94.118	ENSCAFG00020026284	SRBD1	91	93.631	Canis_lupus_dingo
ENSCHOG00000003805	SRBD1	84	93.960	ENSCHIG00000016535	SRBD1	86	93.960	Capra_hircus
ENSCHOG00000003805	SRBD1	87	93.631	ENSTSYG00000012797	SRBD1	86	93.631	Carlito_syrichta
ENSCHOG00000003805	SRBD1	87	94.118	ENSCPOG00000004773	SRBD1	88	94.118	Cavia_porcellus
ENSCHOG00000003805	SRBD1	93	77.252	ENSCCAG00000025589	SRBD1	93	77.252	Cebus_capucinus
ENSCHOG00000003805	SRBD1	93	77.557	ENSCATG00000039530	SRBD1	93	77.557	Cercocebus_atys
ENSCHOG00000003805	SRBD1	87	94.118	ENSCLAG00000008623	SRBD1	88	94.118	Chinchilla_lanigera
ENSCHOG00000003805	SRBD1	93	78.015	ENSCSAG00000013350	SRBD1	93	78.015	Chlorocebus_sabaeus
ENSCHOG00000003805	SRBD1	87	86.275	ENSCPBG00000005677	SRBD1	87	86.275	Chrysemys_picta_bellii
ENSCHOG00000003805	SRBD1	54	69.231	ENSCING00000005950	-	69	69.231	Ciona_intestinalis
ENSCHOG00000003805	SRBD1	53	70.270	ENSCSAVG00000000861	-	69	70.270	Ciona_savignyi
ENSCHOG00000003805	SRBD1	93	77.795	ENSCANG00000016307	SRBD1	93	77.795	Colobus_angolensis_palliatus
ENSCHOG00000003805	SRBD1	87	94.118	ENSCGRG00001000513	Srbd1	87	94.118	Cricetulus_griseus_chok1gshd
ENSCHOG00000003805	SRBD1	87	94.118	ENSCGRG00000002283	Srbd1	87	94.118	Cricetulus_griseus_crigri
ENSCHOG00000003805	SRBD1	64	64.000	ENSCSEG00000000856	si:ch211-117n7.8	72	64.000	Cynoglossus_semilaevis
ENSCHOG00000003805	SRBD1	69	81.395	ENSCVAG00000020212	si:ch211-117n7.8	76	81.395	Cyprinodon_variegatus
ENSCHOG00000003805	SRBD1	93	80.091	ENSDNOG00000018686	SRBD1	93	80.091	Dasypus_novemcinctus
ENSCHOG00000003805	SRBD1	87	92.157	ENSDORG00000010468	Srbd1	87	92.157	Dipodomys_ordii
ENSCHOG00000003805	SRBD1	64	41.722	FBgn0051156	CG31156	69	41.722	Drosophila_melanogaster
ENSCHOG00000003805	SRBD1	70	94.118	ENSETEG00000000739	SRBD1	72	94.118	Echinops_telfairi
ENSCHOG00000003805	SRBD1	87	94.904	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSCHOG00000003805	SRBD1	87	94.268	ENSECAG00000013865	SRBD1	85	94.268	Equus_caballus
ENSCHOG00000003805	SRBD1	82	72.340	ENSELUG00000012592	si:ch211-117n7.8	79	72.340	Esox_lucius
ENSCHOG00000003805	SRBD1	87	96.078	ENSFCAG00000005101	SRBD1	87	96.078	Felis_catus
ENSCHOG00000003805	SRBD1	87	82.353	ENSFALG00000012966	SRBD1	87	82.353	Ficedula_albicollis
ENSCHOG00000003805	SRBD1	84	94.268	ENSFDAG00000016670	SRBD1	86	94.268	Fukomys_damarensis
ENSCHOG00000003805	SRBD1	69	81.395	ENSFHEG00000019480	si:ch211-117n7.8	70	81.395	Fundulus_heteroclitus
ENSCHOG00000003805	SRBD1	93	61.567	ENSGALG00000009990	SRBD1	93	61.567	Gallus_gallus
ENSCHOG00000003805	SRBD1	69	79.070	ENSGAFG00000019664	si:ch211-117n7.8	71	79.070	Gambusia_affinis
ENSCHOG00000003805	SRBD1	74	86.275	ENSGAGG00000006166	SRBD1	84	86.275	Gopherus_agassizii
ENSCHOG00000003805	SRBD1	90	76.630	ENSGGOG00000005910	SRBD1	92	76.442	Gorilla_gorilla
ENSCHOG00000003805	SRBD1	63	74.419	ENSHBUG00000013207	si:ch211-117n7.8	65	74.419	Haplochromis_burtoni
ENSCHOG00000003805	SRBD1	86	94.118	ENSHGLG00000018153	-	87	94.118	Heterocephalus_glaber_female
ENSCHOG00000003805	SRBD1	86	94.118	ENSHGLG00100015183	-	87	94.118	Heterocephalus_glaber_male
ENSCHOG00000003805	SRBD1	71	70.000	ENSIPUG00000009661	srbd1	83	70.000	Ictalurus_punctatus
ENSCHOG00000003805	SRBD1	87	94.268	ENSSTOG00000005898	SRBD1	87	94.268	Ictidomys_tridecemlineatus
ENSCHOG00000003805	SRBD1	80	88.535	ENSJJAG00000022244	Srbd1	81	88.535	Jaculus_jaculus
ENSCHOG00000003805	SRBD1	69	76.744	ENSKMAG00000003473	si:ch211-117n7.8	70	76.744	Kryptolebias_marmoratus
ENSCHOG00000003805	SRBD1	81	79.070	ENSLBEG00000027518	si:ch211-117n7.8	80	79.070	Labrus_bergylta
ENSCHOG00000003805	SRBD1	78	56.506	ENSLACG00000009790	SRBD1	92	56.506	Latimeria_chalumnae
ENSCHOG00000003805	SRBD1	86	75.000	ENSLOCG00000016360	si:ch211-117n7.8	87	75.000	Lepisosteus_oculatus
ENSCHOG00000003805	SRBD1	93	78.168	ENSMFAG00000042026	SRBD1	93	78.168	Macaca_fascicularis
ENSCHOG00000003805	SRBD1	93	77.710	ENSMMUG00000003490	SRBD1	93	77.710	Macaca_mulatta
ENSCHOG00000003805	SRBD1	93	74.046	ENSMNEG00000034701	SRBD1	93	74.046	Macaca_nemestrina
ENSCHOG00000003805	SRBD1	93	77.710	ENSMLEG00000000745	SRBD1	93	77.710	Mandrillus_leucophaeus
ENSCHOG00000003805	SRBD1	68	72.093	ENSMAMG00000021921	si:ch211-117n7.8	75	72.093	Mastacembelus_armatus
ENSCHOG00000003805	SRBD1	82	74.419	ENSMZEG00005027369	si:ch211-117n7.8	81	74.419	Maylandia_zebra
ENSCHOG00000003805	SRBD1	72	62.454	ENSMGAG00000010273	SRBD1	91	62.454	Meleagris_gallopavo
ENSCHOG00000003805	SRBD1	65	92.157	ENSMAUG00000013916	Srbd1	77	92.157	Mesocricetus_auratus
ENSCHOG00000003805	SRBD1	93	78.015	ENSMICG00000007835	SRBD1	93	78.015	Microcebus_murinus
ENSCHOG00000003805	SRBD1	87	90.446	ENSMOCG00000018716	Srbd1	87	90.446	Microtus_ochrogaster
ENSCHOG00000003805	SRBD1	70	79.070	ENSMMOG00000007507	si:ch211-117n7.8	74	79.070	Mola_mola
ENSCHOG00000003805	SRBD1	82	76.744	ENSMALG00000001562	si:ch211-117n7.8	84	76.744	Monopterus_albus
ENSCHOG00000003805	SRBD1	87	90.196	MGP_CAROLIEiJ_G0021934	Srbd1	87	90.196	Mus_caroli
ENSCHOG00000003805	SRBD1	87	92.157	ENSMUSG00000024135	Srbd1	87	92.157	Mus_musculus
ENSCHOG00000003805	SRBD1	87	92.157	MGP_PahariEiJ_G0020924	Srbd1	87	92.157	Mus_pahari
ENSCHOG00000003805	SRBD1	87	92.157	MGP_SPRETEiJ_G0022850	Srbd1	87	92.157	Mus_spretus
ENSCHOG00000003805	SRBD1	87	89.809	ENSMLUG00000007039	SRBD1	87	89.809	Myotis_lucifugus
ENSCHOG00000003805	SRBD1	87	94.118	ENSNGAG00000011893	Srbd1	85	94.118	Nannospalax_galili
ENSCHOG00000003805	SRBD1	69	74.419	ENSNBRG00000012873	si:ch211-117n7.8	71	74.419	Neolamprologus_brichardi
ENSCHOG00000003805	SRBD1	93	76.489	ENSNLEG00000016877	SRBD1	93	76.489	Nomascus_leucogenys
ENSCHOG00000003805	SRBD1	87	92.357	ENSODEG00000012095	SRBD1	87	92.357	Octodon_degus
ENSCHOG00000003805	SRBD1	82	74.419	ENSONIG00000000945	si:ch211-117n7.8	83	76.190	Oreochromis_niloticus
ENSCHOG00000003805	SRBD1	87	95.541	ENSOCUG00000015385	SRBD1	93	77.405	Oryctolagus_cuniculus
ENSCHOG00000003805	SRBD1	71	67.347	ENSORLG00000004427	si:ch211-117n7.8	71	67.347	Oryzias_latipes
ENSCHOG00000003805	SRBD1	71	67.347	ENSORLG00020012792	si:ch211-117n7.8	72	67.347	Oryzias_latipes_hni
ENSCHOG00000003805	SRBD1	71	67.347	ENSORLG00015018598	si:ch211-117n7.8	72	67.347	Oryzias_latipes_hsok
ENSCHOG00000003805	SRBD1	70	67.347	ENSOMEG00000012229	si:ch211-117n7.8	75	67.347	Oryzias_melastigma
ENSCHOG00000003805	SRBD1	87	92.157	ENSOGAG00000001076	SRBD1	82	92.157	Otolemur_garnettii
ENSCHOG00000003805	SRBD1	88	81.190	ENSOARG00000005958	SRBD1	85	82.619	Ovis_aries
ENSCHOG00000003805	SRBD1	93	76.336	ENSPPAG00000038442	SRBD1	93	76.336	Pan_paniscus
ENSCHOG00000003805	SRBD1	93	78.015	ENSPPRG00000003449	SRBD1	93	78.015	Panthera_pardus
ENSCHOG00000003805	SRBD1	93	78.015	ENSPTIG00000012495	SRBD1	93	78.015	Panthera_tigris_altaica
ENSCHOG00000003805	SRBD1	93	76.336	ENSPTRG00000011889	SRBD1	93	76.336	Pan_troglodytes
ENSCHOG00000003805	SRBD1	93	77.863	ENSPANG00000008063	SRBD1	93	77.863	Papio_anubis
ENSCHOG00000003805	SRBD1	72	72.549	ENSPKIG00000021973	si:ch211-117n7.8	84	72.549	Paramormyrops_kingsleyae
ENSCHOG00000003805	SRBD1	87	86.275	ENSPSIG00000008992	SRBD1	87	86.275	Pelodiscus_sinensis
ENSCHOG00000003805	SRBD1	76	79.070	ENSPMGG00000013348	si:ch211-117n7.8	85	79.070	Periophthalmus_magnuspinnatus
ENSCHOG00000003805	SRBD1	87	92.994	ENSPEMG00000020684	Srbd1	86	92.994	Peromyscus_maniculatus_bairdii
ENSCHOG00000003805	SRBD1	84	79.070	ENSPFOG00000010650	si:ch211-117n7.8	80	79.070	Poecilia_formosa
ENSCHOG00000003805	SRBD1	84	79.070	ENSPLAG00000002141	si:ch211-117n7.8	71	79.070	Poecilia_latipinna
ENSCHOG00000003805	SRBD1	84	79.070	ENSPMEG00000018537	si:ch211-117n7.8	80	79.070	Poecilia_mexicana
ENSCHOG00000003805	SRBD1	83	79.070	ENSPREG00000003258	si:ch211-117n7.8	72	79.070	Poecilia_reticulata
ENSCHOG00000003805	SRBD1	93	76.489	ENSPPYG00000012444	SRBD1	87	76.489	Pongo_abelii
ENSCHOG00000003805	SRBD1	65	94.118	ENSPCAG00000005629	SRBD1	69	94.118	Procavia_capensis
ENSCHOG00000003805	SRBD1	80	95.541	ENSPCOG00000017669	SRBD1	83	95.541	Propithecus_coquereli
ENSCHOG00000003805	SRBD1	93	72.491	ENSPVAG00000001782	SRBD1	93	72.491	Pteropus_vampyrus
ENSCHOG00000003805	SRBD1	70	74.419	ENSPNYG00000000508	si:ch211-117n7.8	73	74.419	Pundamilia_nyererei
ENSCHOG00000003805	SRBD1	82	72.000	ENSPNAG00000013492	SRBD1	82	72.000	Pygocentrus_nattereri
ENSCHOG00000003805	SRBD1	87	90.196	ENSRNOG00000014720	Srbd1	87	90.196	Rattus_norvegicus
ENSCHOG00000003805	SRBD1	93	77.489	ENSRBIG00000033486	SRBD1	93	77.489	Rhinopithecus_bieti
ENSCHOG00000003805	SRBD1	93	77.489	ENSRROG00000041599	SRBD1	93	77.489	Rhinopithecus_roxellana
ENSCHOG00000003805	SRBD1	93	76.183	ENSSBOG00000024982	SRBD1	93	76.183	Saimiri_boliviensis_boliviensis
ENSCHOG00000003805	SRBD1	70	72.000	ENSSFOG00015001128	si:ch211-117n7.8	79	72.000	Scleropages_formosus
ENSCHOG00000003805	SRBD1	74	79.070	ENSSMAG00000018256	si:ch211-117n7.8	74	79.070	Scophthalmus_maximus
ENSCHOG00000003805	SRBD1	72	66.000	ENSSLDG00000023189	si:ch211-117n7.8	73	66.000	Seriola_lalandi_dorsalis
ENSCHOG00000003805	SRBD1	87	91.083	ENSSARG00000009740	SRBD1	87	91.083	Sorex_araneus
ENSCHOG00000003805	SRBD1	72	88.235	ENSSPUG00000010475	SRBD1	86	88.235	Sphenodon_punctatus
ENSCHOG00000003805	SRBD1	70	65.306	ENSSPAG00000008092	-	83	65.306	Stegastes_partitus
ENSCHOG00000003805	SRBD1	87	96.178	ENSSSCG00000008445	SRBD1	85	96.178	Sus_scrofa
ENSCHOG00000003805	SRBD1	76	64.694	ENSTGUG00000003878	SRBD1	91	64.694	Taeniopygia_guttata
ENSCHOG00000003805	SRBD1	74	76.190	ENSTRUG00000007080	si:ch211-117n7.8	85	74.419	Takifugu_rubripes
ENSCHOG00000003805	SRBD1	76	74.419	ENSTNIG00000007464	si:ch211-117n7.8	72	74.419	Tetraodon_nigroviridis
ENSCHOG00000003805	SRBD1	64	97.895	ENSTBEG00000004556	SRBD1	64	97.895	Tupaia_belangeri
ENSCHOG00000003805	SRBD1	82	95.541	ENSTTRG00000011871	SRBD1	82	95.541	Tursiops_truncatus
ENSCHOG00000003805	SRBD1	87	94.904	ENSUAMG00000008126	SRBD1	88	94.904	Ursus_americanus
ENSCHOG00000003805	SRBD1	87	94.904	ENSUMAG00000012902	SRBD1	85	94.904	Ursus_maritimus
ENSCHOG00000003805	SRBD1	84	77.601	ENSVPAG00000006825	SRBD1	92	77.601	Vicugna_pacos
ENSCHOG00000003805	SRBD1	87	94.118	ENSVVUG00000005389	SRBD1	92	94.118	Vulpes_vulpes
ENSCHOG00000003805	SRBD1	87	86.000	ENSXETG00000002760	srbd1	84	86.000	Xenopus_tropicalis
ENSCHOG00000003805	SRBD1	69	79.070	ENSXMAG00000016861	si:ch211-117n7.8	71	79.070	Xiphophorus_maculatus