EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000003898 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 966 bases
Position: chrscaffold_288300:699-1664
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	1	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	2	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	3	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	4	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	5	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	6	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	7	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	8	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	9	10
ENSCHOP00000003444	zf-C2H2	PF00096.26	3.3e-54	10	10
ENSCHOP00000003444	zf-met	PF12874.7	9.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000003911	-	966	-	ENSCHOP00000003444	321 (aa)	-	UPI0001F9EC74

Gene Model

Click here to download ENSCHOG00000003898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000003898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000003898	-	100	54.902	ENSCHOG00000008899	-	100	54.902
ENSCHOG00000003898	-	100	98.754	ENSCHOG00000008173	-	76	98.754
ENSCHOG00000003898	-	100	50.340	ENSCHOG00000004832	-	85	50.340
ENSCHOG00000003898	-	100	53.571	ENSCHOG00000010954	-	95	53.571
ENSCHOG00000003898	-	100	52.648	ENSCHOG00000011095	ZNF112	83	52.648
ENSCHOG00000003898	-	100	49.425	ENSCHOG00000009162	-	82	49.425
ENSCHOG00000003898	-	100	50.347	ENSCHOG00000013069	-	78	51.341
ENSCHOG00000003898	-	100	50.000	ENSCHOG00000008632	-	74	50.000
ENSCHOG00000003898	-	100	54.688	ENSCHOG00000012657	ZNF227	74	54.688
ENSCHOG00000003898	-	100	51.911	ENSCHOG00000004429	-	74	51.911
ENSCHOG00000003898	-	100	56.442	ENSCHOG00000005861	-	99	56.442
ENSCHOG00000003898	-	100	57.422	ENSCHOG00000012411	ZNF582	56	57.422
ENSCHOG00000003898	-	100	45.788	ENSCHOG00000004232	-	95	45.788
ENSCHOG00000003898	-	100	44.201	ENSCHOG00000003808	-	97	44.201
ENSCHOG00000003898	-	100	52.209	ENSCHOG00000003880	ZFP1	65	52.209
ENSCHOG00000003898	-	100	50.859	ENSCHOG00000003925	-	74	50.859
ENSCHOG00000003898	-	99	39.098	ENSCHOG00000007046	-	53	38.060
ENSCHOG00000003898	-	100	49.763	ENSCHOG00000000300	-	53	49.763
ENSCHOG00000003898	-	100	50.181	ENSCHOG00000010443	ZNF233	66	50.168
ENSCHOG00000003898	-	100	40.217	ENSCHOG00000000113	ZFP64	57	40.217
ENSCHOG00000003898	-	100	46.296	ENSCHOG00000004080	ZNF317	67	47.561
ENSCHOG00000003898	-	100	37.313	ENSCHOG00000009909	ZNF408	54	37.687
ENSCHOG00000003898	-	100	50.000	ENSCHOG00000003944	-	82	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000003898	-	100	96.262	ENSCAFG00020003589	-	91	96.262	Canis_lupus_dingo
ENSCHOG00000003898	-	100	95.639	ENSTSYG00000008405	-	76	95.639	Carlito_syrichta
ENSCHOG00000003898	-	100	92.835	ENSCAPG00000013118	-	78	92.835	Cavia_aperea
ENSCHOG00000003898	-	100	95.950	ENSCPOG00000034791	-	75	95.950	Cavia_porcellus
ENSCHOG00000003898	-	100	96.262	ENSCLAG00000014648	-	76	96.262	Chinchilla_lanigera
ENSCHOG00000003898	-	100	95.625	ENSCGRG00001021088	Zfp354a	73	95.625	Cricetulus_griseus_chok1gshd
ENSCHOG00000003898	-	100	95.625	ENSCGRG00000015037	Zfp354a	73	95.625	Cricetulus_griseus_crigri
ENSCHOG00000003898	-	100	98.131	ENSDNOG00000043806	-	100	98.131	Dasypus_novemcinctus
ENSCHOG00000003898	-	100	95.625	ENSDORG00000009396	Zfp354a	80	95.625	Dipodomys_ordii
ENSCHOG00000003898	-	100	95.333	ENSETEG00000020249	-	88	95.333	Echinops_telfairi
ENSCHOG00000003898	-	100	95.016	ENSEEUG00000008362	-	90	95.016	Erinaceus_europaeus
ENSCHOG00000003898	-	100	96.885	ENSFDAG00000015190	-	71	96.885	Fukomys_damarensis
ENSCHOG00000003898	-	100	96.262	ENSHGLG00000005975	-	78	96.262	Heterocephalus_glaber_female
ENSCHOG00000003898	-	100	95.950	ENSHGLG00100012284	-	92	95.950	Heterocephalus_glaber_male
ENSCHOG00000003898	-	100	96.262	ENSSTOG00000024118	-	85	96.262	Ictidomys_tridecemlineatus
ENSCHOG00000003898	-	100	95.312	ENSLAFG00000002909	-	89	95.312	Loxodonta_africana
ENSCHOG00000003898	-	100	95.625	ENSMAUG00000000735	Zfp354a	80	95.625	Mesocricetus_auratus
ENSCHOG00000003898	-	100	94.062	ENSMICG00000006390	ZNF354A	75	94.062	Microcebus_murinus
ENSCHOG00000003898	-	100	95.000	ENSMOCG00000003692	Zfp354a	89	95.000	Microtus_ochrogaster
ENSCHOG00000003898	-	100	94.704	MGP_CAROLIEiJ_G0016306	Zfp354a	69	94.704	Mus_caroli
ENSCHOG00000003898	-	100	94.704	ENSMUSG00000020364	Zfp354a	72	94.704	Mus_musculus
ENSCHOG00000003898	-	100	94.704	MGP_PahariEiJ_G0017441	Zfp354a	76	94.704	Mus_pahari
ENSCHOG00000003898	-	100	95.016	ENSNGAG00000011769	Zfp354a	77	95.016	Nannospalax_galili
ENSCHOG00000003898	-	100	95.016	ENSODEG00000008278	-	87	95.016	Octodon_degus
ENSCHOG00000003898	-	100	96.885	ENSPPAG00000039371	ZNF354A	77	96.885	Pan_paniscus
ENSCHOG00000003898	-	100	96.644	ENSPTRG00000017606	ZNF354A	83	96.644	Pan_troglodytes
ENSCHOG00000003898	-	100	96.053	ENSPEMG00000024167	Zfp354a	67	92.500	Peromyscus_maniculatus_bairdii
ENSCHOG00000003898	-	100	96.573	ENSUAMG00000000212	-	79	96.573	Ursus_americanus