EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000005211 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 25834 bases
Position: chrGeneScaffold_3793:5649-31482
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000004620	RTC	PF01137.21	3.1e-88	1	1
ENSCHOP00000004620	RTC_insert	PF05189.13	7.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000005230	RTCA-201	1101	-	ENSCHOP00000004620	366 (aa)	-	UPI0001F9F307

Gene Model

Click here to download ENSCHOG00000005211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000005211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000005211	RTCA	100	93.443	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSCHOG00000005211	RTCA	99	70.360	ENSAPOG00000001345	rtca	98	70.360	Acanthochromis_polyacanthus
ENSCHOG00000005211	RTCA	73	95.880	ENSAMEG00000008855	RTCA	99	95.880	Ailuropoda_melanoleuca
ENSCHOG00000005211	RTCA	99	70.637	ENSACIG00000019643	rtca	99	70.637	Amphilophus_citrinellus
ENSCHOG00000005211	RTCA	100	69.672	ENSAOCG00000014979	rtca	99	69.672	Amphiprion_ocellaris
ENSCHOG00000005211	RTCA	100	69.672	ENSAPEG00000006945	rtca	99	69.672	Amphiprion_percula
ENSCHOG00000005211	RTCA	100	69.126	ENSATEG00000006315	rtca	100	69.126	Anabas_testudineus
ENSCHOG00000005211	RTCA	96	79.944	ENSAPLG00000015430	RTCA	100	79.944	Anas_platyrhynchos
ENSCHOG00000005211	RTCA	100	93.169	ENSANAG00000025446	RTCA	100	93.169	Aotus_nancymaae
ENSCHOG00000005211	RTCA	99	69.806	ENSACLG00000020770	rtca	98	69.806	Astatotilapia_calliptera
ENSCHOG00000005211	RTCA	100	71.585	ENSAMXG00000043271	rtca	100	71.585	Astyanax_mexicanus
ENSCHOG00000005211	RTCA	100	95.082	ENSBTAG00000006321	RTCA	100	95.082	Bos_taurus
ENSCHOG00000005211	RTCA	100	93.169	ENSCJAG00000003398	RTCA	100	93.169	Callithrix_jacchus
ENSCHOG00000005211	RTCA	99	95.330	ENSCAFG00000020010	RTCA	67	95.330	Canis_familiaris
ENSCHOG00000005211	RTCA	99	95.330	ENSCAFG00020011528	RTCA	57	95.330	Canis_lupus_dingo
ENSCHOG00000005211	RTCA	100	95.355	ENSCHIG00000018937	RTCA	100	95.355	Capra_hircus
ENSCHOG00000005211	RTCA	100	93.443	ENSTSYG00000011305	RTCA	100	93.443	Carlito_syrichta
ENSCHOG00000005211	RTCA	100	92.896	ENSCCAG00000021844	RTCA	100	92.896	Cebus_capucinus
ENSCHOG00000005211	RTCA	100	90.237	ENSCATG00000019364	RTCA	100	93.204	Cercocebus_atys
ENSCHOG00000005211	RTCA	87	94.006	ENSCLAG00000006125	RTCA	100	94.006	Chinchilla_lanigera
ENSCHOG00000005211	RTCA	100	93.716	ENSCSAG00000001509	RTCA	100	93.716	Chlorocebus_sabaeus
ENSCHOG00000005211	RTCA	100	84.153	ENSCPBG00000026658	RTCA	100	84.153	Chrysemys_picta_bellii
ENSCHOG00000005211	RTCA	98	55.866	ENSCING00000007875	-	98	55.866	Ciona_intestinalis
ENSCHOG00000005211	RTCA	98	54.875	ENSCSAVG00000007269	-	98	54.875	Ciona_savignyi
ENSCHOG00000005211	RTCA	100	93.443	ENSCANG00000040106	RTCA	100	93.443	Colobus_angolensis_palliatus
ENSCHOG00000005211	RTCA	73	92.565	ENSCGRG00001013163	Rtca	85	92.565	Cricetulus_griseus_chok1gshd
ENSCHOG00000005211	RTCA	98	69.188	ENSCSEG00000000530	rtca	95	69.188	Cynoglossus_semilaevis
ENSCHOG00000005211	RTCA	100	57.609	ENSCVAG00000021809	rtca	100	57.609	Cyprinodon_variegatus
ENSCHOG00000005211	RTCA	100	72.404	ENSDARG00000002215	rtca	100	72.404	Danio_rerio
ENSCHOG00000005211	RTCA	100	96.175	ENSDNOG00000000456	RTCA	100	96.175	Dasypus_novemcinctus
ENSCHOG00000005211	RTCA	99	93.681	ENSDORG00000005448	Rtca	99	93.681	Dipodomys_ordii
ENSCHOG00000005211	RTCA	98	38.827	FBgn0025630	Rtca	98	38.827	Drosophila_melanogaster
ENSCHOG00000005211	RTCA	94	55.172	ENSEBUG00000008556	rtca	96	55.172	Eptatretus_burgeri
ENSCHOG00000005211	RTCA	100	94.809	ENSEASG00005015926	RTCA	100	94.809	Equus_asinus_asinus
ENSCHOG00000005211	RTCA	100	94.809	ENSECAG00000019831	RTCA	100	94.809	Equus_caballus
ENSCHOG00000005211	RTCA	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSCHOG00000005211	RTCA	98	71.667	ENSELUG00000003741	rtca	99	71.667	Esox_lucius
ENSCHOG00000005211	RTCA	99	95.055	ENSFCAG00000024460	RTCA	99	95.055	Felis_catus
ENSCHOG00000005211	RTCA	93	81.471	ENSFALG00000002443	RTCA	91	81.471	Ficedula_albicollis
ENSCHOG00000005211	RTCA	100	94.536	ENSFDAG00000012070	-	100	94.536	Fukomys_damarensis
ENSCHOG00000005211	RTCA	98	73.204	ENSFDAG00000016084	-	100	73.204	Fukomys_damarensis
ENSCHOG00000005211	RTCA	59	69.302	ENSFHEG00000002868	rtca	96	67.257	Fundulus_heteroclitus
ENSCHOG00000005211	RTCA	100	68.306	ENSGMOG00000013264	rtca	100	68.306	Gadus_morhua
ENSCHOG00000005211	RTCA	100	83.333	ENSGALG00000005277	RTCA	100	83.333	Gallus_gallus
ENSCHOG00000005211	RTCA	99	71.191	ENSGAFG00000011853	rtca	98	71.191	Gambusia_affinis
ENSCHOG00000005211	RTCA	100	68.033	ENSGACG00000013497	rtca	100	68.033	Gasterosteus_aculeatus
ENSCHOG00000005211	RTCA	80	84.983	ENSGAGG00000023306	RTCA	100	84.983	Gopherus_agassizii
ENSCHOG00000005211	RTCA	100	93.443	ENSGGOG00000009546	-	100	93.443	Gorilla_gorilla
ENSCHOG00000005211	RTCA	100	92.623	ENSGGOG00000044018	-	100	92.623	Gorilla_gorilla
ENSCHOG00000005211	RTCA	99	69.529	ENSHBUG00000002114	rtca	98	69.529	Haplochromis_burtoni
ENSCHOG00000005211	RTCA	100	93.716	ENSHGLG00000002617	RTCA	100	93.716	Heterocephalus_glaber_female
ENSCHOG00000005211	RTCA	100	93.716	ENSHGLG00100006056	RTCA	100	93.716	Heterocephalus_glaber_male
ENSCHOG00000005211	RTCA	99	64.266	ENSHCOG00000020628	rtca	88	64.266	Hippocampus_comes
ENSCHOG00000005211	RTCA	100	71.585	ENSIPUG00000024803	rtca	100	71.585	Ictalurus_punctatus
ENSCHOG00000005211	RTCA	100	87.158	ENSSTOG00000013528	-	100	87.158	Ictidomys_tridecemlineatus
ENSCHOG00000005211	RTCA	100	81.744	ENSSTOG00000033099	-	100	81.744	Ictidomys_tridecemlineatus
ENSCHOG00000005211	RTCA	100	67.760	ENSJJAG00000016178	Rtca	100	67.760	Jaculus_jaculus
ENSCHOG00000005211	RTCA	100	71.038	ENSKMAG00000006651	rtca	99	71.038	Kryptolebias_marmoratus
ENSCHOG00000005211	RTCA	99	68.698	ENSLBEG00000028971	rtca	99	68.698	Labrus_bergylta
ENSCHOG00000005211	RTCA	88	68.536	ENSLBEG00000002448	-	99	68.536	Labrus_bergylta
ENSCHOG00000005211	RTCA	100	77.049	ENSLACG00000013666	RTCA	100	77.049	Latimeria_chalumnae
ENSCHOG00000005211	RTCA	99	72.603	ENSLOCG00000000093	rtca	99	72.603	Lepisosteus_oculatus
ENSCHOG00000005211	RTCA	100	94.809	ENSLAFG00000001473	RTCA	100	94.809	Loxodonta_africana
ENSCHOG00000005211	RTCA	100	93.716	ENSMFAG00000034132	RTCA	100	93.716	Macaca_fascicularis
ENSCHOG00000005211	RTCA	100	93.169	ENSMMUG00000019105	RTCA	100	93.169	Macaca_mulatta
ENSCHOG00000005211	RTCA	84	93.528	ENSMNEG00000037163	RTCA	100	93.528	Macaca_nemestrina
ENSCHOG00000005211	RTCA	100	77.049	ENSMLEG00000042151	RTCA	100	77.049	Mandrillus_leucophaeus
ENSCHOG00000005211	RTCA	100	71.585	ENSMAMG00000016536	rtca	100	71.585	Mastacembelus_armatus
ENSCHOG00000005211	RTCA	99	69.806	ENSMZEG00005017945	rtca	98	69.806	Maylandia_zebra
ENSCHOG00000005211	RTCA	87	81.505	ENSMGAG00000006892	RTCA	99	81.505	Meleagris_gallopavo
ENSCHOG00000005211	RTCA	100	91.530	ENSMAUG00000008488	Rtca	100	91.530	Mesocricetus_auratus
ENSCHOG00000005211	RTCA	84	94.822	ENSMICG00000008643	RTCA	100	94.822	Microcebus_murinus
ENSCHOG00000005211	RTCA	100	92.896	ENSMOCG00000016660	Rtca	100	92.896	Microtus_ochrogaster
ENSCHOG00000005211	RTCA	84	70.874	ENSMMOG00000007750	rtca	100	70.874	Mola_mola
ENSCHOG00000005211	RTCA	99	91.233	ENSMODG00000003557	RTCA	99	91.233	Monodelphis_domestica
ENSCHOG00000005211	RTCA	100	71.311	ENSMALG00000020844	rtca	100	71.311	Monopterus_albus
ENSCHOG00000005211	RTCA	100	90.984	MGP_CAROLIEiJ_G0025565	Rtca	100	90.984	Mus_caroli
ENSCHOG00000005211	RTCA	100	90.437	ENSMUSG00000000339	Rtca	100	90.437	Mus_musculus
ENSCHOG00000005211	RTCA	100	90.710	MGP_PahariEiJ_G0027011	Rtca	100	90.710	Mus_pahari
ENSCHOG00000005211	RTCA	100	90.710	MGP_SPRETEiJ_G0026515	Rtca	100	90.710	Mus_spretus
ENSCHOG00000005211	RTCA	99	95.330	ENSMPUG00000012119	RTCA	99	95.330	Mustela_putorius_furo
ENSCHOG00000005211	RTCA	100	88.283	ENSMLUG00000009922	RTCA	100	88.283	Myotis_lucifugus
ENSCHOG00000005211	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSCHOG00000005211	RTCA	99	69.806	ENSNBRG00000003062	rtca	98	69.806	Neolamprologus_brichardi
ENSCHOG00000005211	RTCA	100	93.443	ENSNLEG00000031426	RTCA	100	93.443	Nomascus_leucogenys
ENSCHOG00000005211	RTCA	58	95.122	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSCHOG00000005211	RTCA	73	87.732	ENSOPRG00000012092	RTCA	71	87.732	Ochotona_princeps
ENSCHOG00000005211	RTCA	95	93.678	ENSODEG00000006990	RTCA	96	93.732	Octodon_degus
ENSCHOG00000005211	RTCA	99	69.806	ENSONIG00000007753	rtca	98	69.806	Oreochromis_niloticus
ENSCHOG00000005211	RTCA	87	87.066	ENSOANG00000012055	RTCA	98	87.066	Ornithorhynchus_anatinus
ENSCHOG00000005211	RTCA	100	94.809	ENSOCUG00000014247	RTCA	100	94.809	Oryctolagus_cuniculus
ENSCHOG00000005211	RTCA	100	69.672	ENSORLG00000013605	rtca	100	69.672	Oryzias_latipes
ENSCHOG00000005211	RTCA	100	69.672	ENSORLG00020001904	rtca	100	69.672	Oryzias_latipes_hni
ENSCHOG00000005211	RTCA	100	69.672	ENSORLG00015021064	rtca	100	69.672	Oryzias_latipes_hsok
ENSCHOG00000005211	RTCA	100	70.219	ENSOMEG00000000756	rtca	100	70.219	Oryzias_melastigma
ENSCHOG00000005211	RTCA	100	84.699	ENSOGAG00000005627	RTCA	100	84.699	Otolemur_garnettii
ENSCHOG00000005211	RTCA	87	94.654	ENSOARG00000018122	RTCA	100	94.654	Ovis_aries
ENSCHOG00000005211	RTCA	100	90.237	ENSPPAG00000035119	RTCA	100	93.528	Pan_paniscus
ENSCHOG00000005211	RTCA	99	94.780	ENSPPRG00000000350	RTCA	99	94.780	Panthera_pardus
ENSCHOG00000005211	RTCA	99	94.780	ENSPTIG00000012816	RTCA	99	94.780	Panthera_tigris_altaica
ENSCHOG00000005211	RTCA	100	89.710	ENSPTRG00000001004	RTCA	100	92.880	Pan_troglodytes
ENSCHOG00000005211	RTCA	100	93.716	ENSPANG00000000346	RTCA	100	93.716	Papio_anubis
ENSCHOG00000005211	RTCA	100	72.951	ENSPKIG00000001653	rtca	100	72.951	Paramormyrops_kingsleyae
ENSCHOG00000005211	RTCA	100	84.699	ENSPSIG00000011408	RTCA	100	84.699	Pelodiscus_sinensis
ENSCHOG00000005211	RTCA	100	91.803	ENSPEMG00000018582	Rtca	100	91.803	Peromyscus_maniculatus_bairdii
ENSCHOG00000005211	RTCA	99	59.945	ENSPMAG00000009110	rtca	100	58.856	Petromyzon_marinus
ENSCHOG00000005211	RTCA	99	91.736	ENSPCIG00000007684	RTCA	99	91.736	Phascolarctos_cinereus
ENSCHOG00000005211	RTCA	100	70.845	ENSPFOG00000004824	rtca	100	70.845	Poecilia_formosa
ENSCHOG00000005211	RTCA	100	71.038	ENSPLAG00000011753	rtca	99	71.038	Poecilia_latipinna
ENSCHOG00000005211	RTCA	100	71.038	ENSPMEG00000020469	rtca	99	71.038	Poecilia_mexicana
ENSCHOG00000005211	RTCA	99	72.576	ENSPREG00000001365	rtca	98	72.576	Poecilia_reticulata
ENSCHOG00000005211	RTCA	100	93.443	ENSPPYG00000001115	RTCA	100	93.443	Pongo_abelii
ENSCHOG00000005211	RTCA	100	90.984	ENSPCAG00000005076	RTCA	100	90.984	Procavia_capensis
ENSCHOG00000005211	RTCA	100	95.082	ENSPCOG00000005603	RTCA	100	95.082	Propithecus_coquereli
ENSCHOG00000005211	RTCA	100	89.446	ENSPVAG00000009478	RTCA	100	89.446	Pteropus_vampyrus
ENSCHOG00000005211	RTCA	99	69.806	ENSPNYG00000004722	rtca	98	69.806	Pundamilia_nyererei
ENSCHOG00000005211	RTCA	100	72.404	ENSPNAG00000022270	rtca	100	72.404	Pygocentrus_nattereri
ENSCHOG00000005211	RTCA	100	90.984	ENSRNOG00000014575	Rtca	100	90.984	Rattus_norvegicus
ENSCHOG00000005211	RTCA	100	89.710	ENSRBIG00000041180	RTCA	100	92.557	Rhinopithecus_bieti
ENSCHOG00000005211	RTCA	100	92.896	ENSRROG00000024929	RTCA	100	92.896	Rhinopithecus_roxellana
ENSCHOG00000005211	RTCA	100	92.350	ENSSBOG00000028626	RTCA	100	92.350	Saimiri_boliviensis_boliviensis
ENSCHOG00000005211	RTCA	100	91.257	ENSSHAG00000001758	RTCA	100	91.257	Sarcophilus_harrisii
ENSCHOG00000005211	RTCA	98	68.056	ENSSMAG00000014680	rtca	97	68.056	Scophthalmus_maximus
ENSCHOG00000005211	RTCA	98	70.000	ENSSDUG00000015585	rtca	97	70.000	Seriola_dumerili
ENSCHOG00000005211	RTCA	96	70.655	ENSSLDG00000018985	rtca	95	70.655	Seriola_lalandi_dorsalis
ENSCHOG00000005211	RTCA	87	86.435	ENSSARG00000013993	RTCA	100	86.435	Sorex_araneus
ENSCHOG00000005211	RTCA	100	69.126	ENSSPAG00000011938	rtca	99	69.126	Stegastes_partitus
ENSCHOG00000005211	RTCA	100	94.536	ENSSSCG00000006865	RTCA	100	94.536	Sus_scrofa
ENSCHOG00000005211	RTCA	100	82.514	ENSTGUG00000005154	RTCA	100	82.514	Taeniopygia_guttata
ENSCHOG00000005211	RTCA	100	69.945	ENSTRUG00000008799	rtca	100	69.945	Takifugu_rubripes
ENSCHOG00000005211	RTCA	99	71.703	ENSTNIG00000004725	rtca	99	71.703	Tetraodon_nigroviridis
ENSCHOG00000005211	RTCA	59	80.000	ENSTBEG00000000943	RTCA	82	63.866	Tupaia_belangeri
ENSCHOG00000005211	RTCA	100	89.710	ENSTTRG00000015327	RTCA	100	89.710	Tursiops_truncatus
ENSCHOG00000005211	RTCA	94	92.128	ENSUAMG00000017265	RTCA	96	92.128	Ursus_americanus
ENSCHOG00000005211	RTCA	99	94.780	ENSUMAG00000007881	RTCA	99	94.780	Ursus_maritimus
ENSCHOG00000005211	RTCA	87	84.227	ENSVPAG00000001039	RTCA	84	84.227	Vicugna_pacos
ENSCHOG00000005211	RTCA	99	95.055	ENSVVUG00000022041	RTCA	67	95.055	Vulpes_vulpes
ENSCHOG00000005211	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSCHOG00000005211	RTCA	99	62.881	ENSXCOG00000008002	rtca	99	62.881	Xiphophorus_couchianus
ENSCHOG00000005211	RTCA	99	71.468	ENSXMAG00000005482	rtca	98	71.468	Xiphophorus_maculatus