EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000005327 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4
Alias: APP-1|iPABP
Full Name: poly(A) binding protein cytoplasmic 4
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 12081 bases
Position: chrGeneScaffold_1082:3207-15287
Accession: 8557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000004726	PABP	PF00658.18	1.6e-26	1	1
ENSCHOP00000004726	RRM_1	PF00076.22	3.1e-67	1	3
ENSCHOP00000004726	RRM_1	PF00076.22	3.1e-67	2	3
ENSCHOP00000004726	RRM_1	PF00076.22	3.1e-67	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000005347	PABPC4-201	1785	-	ENSCHOP00000004726	594 (aa)	-	UPI0001F9F4CE

Gene Model

Click here to download ENSCHOG00000005327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000005327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000005327	PABPC4	80	83.168	ENSCHOG00000008178	PABPC1	75	83.168

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000005327	PABPC4	81	97.361	ENSG00000090621	PABPC4	99	99.029	Homo_sapiens
ENSCHOG00000005327	PABPC4	79	89.757	ENSAPOG00000001161	pabpc4	87	89.211	Acanthochromis_polyacanthus
ENSCHOG00000005327	PABPC4	80	61.273	ENSAMEG00000015083	-	78	61.273	Ailuropoda_melanoleuca
ENSCHOG00000005327	PABPC4	81	97.889	ENSAMEG00000011535	-	82	97.889	Ailuropoda_melanoleuca
ENSCHOG00000005327	PABPC4	79	90.027	ENSACIG00000023343	pabpc4	86	89.474	Amphilophus_citrinellus
ENSCHOG00000005327	PABPC4	79	89.757	ENSAOCG00000021529	pabpc4	90	89.211	Amphiprion_ocellaris
ENSCHOG00000005327	PABPC4	79	89.757	ENSAPEG00000019196	pabpc4	87	89.211	Amphiprion_percula
ENSCHOG00000005327	PABPC4	79	88.710	ENSATEG00000007402	pabpc4	87	88.189	Anabas_testudineus
ENSCHOG00000005327	PABPC4	81	91.557	ENSAPLG00000009729	-	87	91.557	Anas_platyrhynchos
ENSCHOG00000005327	PABPC4	80	91.153	ENSACAG00000002544	PABPC4	85	91.153	Anolis_carolinensis
ENSCHOG00000005327	PABPC4	81	97.098	ENSANAG00000025079	PABPC4	86	97.098	Aotus_nancymaae
ENSCHOG00000005327	PABPC4	79	90.027	ENSACLG00000019558	pabpc4	87	89.474	Astatotilapia_calliptera
ENSCHOG00000005327	PABPC4	79	83.673	ENSAMXG00000018779	pabpc4	84	83.673	Astyanax_mexicanus
ENSCHOG00000005327	PABPC4	50	92.233	ENSBTAG00000048536	-	92	92.233	Bos_taurus
ENSCHOG00000005327	PABPC4	81	97.361	ENSBTAG00000017125	PABPC4	84	97.361	Bos_taurus
ENSCHOG00000005327	PABPC4	59	92.268	ENSCJAG00000045953	-	74	92.268	Callithrix_jacchus
ENSCHOG00000005327	PABPC4	81	97.625	ENSCJAG00000002512	-	86	97.625	Callithrix_jacchus
ENSCHOG00000005327	PABPC4	81	97.889	ENSCAFG00000003081	PABPC4	86	97.889	Canis_familiaris
ENSCHOG00000005327	PABPC4	81	97.889	ENSCAFG00020004161	PABPC4	82	97.889	Canis_lupus_dingo
ENSCHOG00000005327	PABPC4	79	79.019	ENSCHIG00000023385	-	83	79.019	Capra_hircus
ENSCHOG00000005327	PABPC4	81	97.098	ENSCHIG00000019398	-	82	97.098	Capra_hircus
ENSCHOG00000005327	PABPC4	81	97.889	ENSTSYG00000006532	PABPC4	86	97.889	Carlito_syrichta
ENSCHOG00000005327	PABPC4	81	97.361	ENSCAPG00000015984	PABPC4	91	97.361	Cavia_aperea
ENSCHOG00000005327	PABPC4	81	97.098	ENSCPOG00000009552	PABPC4	89	97.098	Cavia_porcellus
ENSCHOG00000005327	PABPC4	81	97.361	ENSCCAG00000037306	PABPC4	86	97.361	Cebus_capucinus
ENSCHOG00000005327	PABPC4	81	97.625	ENSCATG00000042164	PABPC4	86	97.625	Cercocebus_atys
ENSCHOG00000005327	PABPC4	81	97.889	ENSCLAG00000011899	PABPC4	86	97.889	Chinchilla_lanigera
ENSCHOG00000005327	PABPC4	81	97.625	ENSCSAG00000001135	PABPC4	82	97.625	Chlorocebus_sabaeus
ENSCHOG00000005327	PABPC4	81	91.557	ENSCPBG00000001038	PABPC4	86	91.557	Chrysemys_picta_bellii
ENSCHOG00000005327	PABPC4	81	97.625	ENSCANG00000034177	PABPC4	87	97.625	Colobus_angolensis_palliatus
ENSCHOG00000005327	PABPC4	80	96.570	ENSCGRG00001018166	Pabpc4	90	96.570	Cricetulus_griseus_chok1gshd
ENSCHOG00000005327	PABPC4	80	96.570	ENSCGRG00000009777	Pabpc4	89	96.570	Cricetulus_griseus_crigri
ENSCHOG00000005327	PABPC4	79	89.488	ENSCSEG00000000130	pabpc4	87	88.947	Cynoglossus_semilaevis
ENSCHOG00000005327	PABPC4	79	90.027	ENSCVAG00000019246	pabpc4	88	89.474	Cyprinodon_variegatus
ENSCHOG00000005327	PABPC4	78	90.027	ENSDARG00000059259	pabpc4	85	89.474	Danio_rerio
ENSCHOG00000005327	PABPC4	80	97.855	ENSDNOG00000018444	-	85	97.855	Dasypus_novemcinctus
ENSCHOG00000005327	PABPC4	81	97.361	ENSDORG00000011581	Pabpc4	84	97.361	Dipodomys_ordii
ENSCHOG00000005327	PABPC4	76	95.290	ENSETEG00000018453	-	57	95.290	Echinops_telfairi
ENSCHOG00000005327	PABPC4	76	65.084	ENSETEG00000009172	-	84	65.084	Echinops_telfairi
ENSCHOG00000005327	PABPC4	76	86.585	ENSEBUG00000013782	pabpc4	85	82.105	Eptatretus_burgeri
ENSCHOG00000005327	PABPC4	80	79.737	ENSEBUG00000000992	pabpc4	89	81.471	Eptatretus_burgeri
ENSCHOG00000005327	PABPC4	81	97.889	ENSEASG00005014119	PABPC4	86	97.889	Equus_asinus_asinus
ENSCHOG00000005327	PABPC4	81	97.889	ENSECAG00000009396	PABPC4	86	97.889	Equus_caballus
ENSCHOG00000005327	PABPC4	81	94.960	ENSEEUG00000002962	PABPC4	82	94.960	Erinaceus_europaeus
ENSCHOG00000005327	PABPC4	78	89.218	ENSELUG00000003195	pabpc4	84	88.684	Esox_lucius
ENSCHOG00000005327	PABPC4	81	97.889	ENSFCAG00000015254	-	86	97.889	Felis_catus
ENSCHOG00000005327	PABPC4	81	90.237	ENSFALG00000000543	PABPC4	86	90.237	Ficedula_albicollis
ENSCHOG00000005327	PABPC4	81	68.773	ENSFDAG00000010581	-	81	62.169	Fukomys_damarensis
ENSCHOG00000005327	PABPC4	81	97.889	ENSFDAG00000020016	-	82	97.889	Fukomys_damarensis
ENSCHOG00000005327	PABPC4	79	90.761	ENSFHEG00000007548	pabpc4	91	89.474	Fundulus_heteroclitus
ENSCHOG00000005327	PABPC4	79	88.949	ENSGMOG00000019025	pabpc4	84	88.421	Gadus_morhua
ENSCHOG00000005327	PABPC4	81	91.557	ENSGALG00000003800	PABPC4	86	91.557	Gallus_gallus
ENSCHOG00000005327	PABPC4	80	89.488	ENSGAFG00000018195	pabpc4	98	95.161	Gambusia_affinis
ENSCHOG00000005327	PABPC4	79	88.679	ENSGACG00000007179	pabpc4	87	88.158	Gasterosteus_aculeatus
ENSCHOG00000005327	PABPC4	81	91.557	ENSGAGG00000001888	PABPC4	86	91.557	Gopherus_agassizii
ENSCHOG00000005327	PABPC4	81	97.361	ENSGGOG00000004002	PABPC4	86	97.361	Gorilla_gorilla
ENSCHOG00000005327	PABPC4	79	90.027	ENSHBUG00000020206	pabpc4	87	89.474	Haplochromis_burtoni
ENSCHOG00000005327	PABPC4	81	97.889	ENSHGLG00000011162	PABPC4	86	97.889	Heterocephalus_glaber_female
ENSCHOG00000005327	PABPC4	81	97.889	ENSHGLG00100001580	PABPC4	86	97.889	Heterocephalus_glaber_male
ENSCHOG00000005327	PABPC4	79	89.674	ENSHCOG00000012694	pabpc4	88	88.654	Hippocampus_comes
ENSCHOG00000005327	PABPC4	77	88.949	ENSIPUG00000016620	pabpc4	85	88.564	Ictalurus_punctatus
ENSCHOG00000005327	PABPC4	81	97.625	ENSSTOG00000010416	PABPC4	89	97.625	Ictidomys_tridecemlineatus
ENSCHOG00000005327	PABPC4	81	94.723	ENSJJAG00000007781	Pabpc4	84	94.723	Jaculus_jaculus
ENSCHOG00000005327	PABPC4	79	89.757	ENSKMAG00000013597	pabpc4	89	89.211	Kryptolebias_marmoratus
ENSCHOG00000005327	PABPC4	79	89.488	ENSLBEG00000013654	pabpc4	86	88.947	Labrus_bergylta
ENSCHOG00000005327	PABPC4	80	90.741	ENSLACG00000011907	PABPC4	85	90.741	Latimeria_chalumnae
ENSCHOG00000005327	PABPC4	79	91.375	ENSLOCG00000001877	pabpc4	85	90.789	Lepisosteus_oculatus
ENSCHOG00000005327	PABPC4	81	97.889	ENSLAFG00000000151	PABPC4	89	97.889	Loxodonta_africana
ENSCHOG00000005327	PABPC4	81	97.625	ENSMFAG00000041481	PABPC4	86	97.625	Macaca_fascicularis
ENSCHOG00000005327	PABPC4	81	97.625	ENSMMUG00000007497	PABPC4	82	97.625	Macaca_mulatta
ENSCHOG00000005327	PABPC4	81	97.625	ENSMNEG00000043054	PABPC4	86	97.625	Macaca_nemestrina
ENSCHOG00000005327	PABPC4	81	97.625	ENSMLEG00000040716	PABPC4	86	97.625	Mandrillus_leucophaeus
ENSCHOG00000005327	PABPC4	79	89.488	ENSMAMG00000010025	pabpc4	86	88.947	Mastacembelus_armatus
ENSCHOG00000005327	PABPC4	79	90.489	ENSMZEG00005006141	pabpc4	91	89.211	Maylandia_zebra
ENSCHOG00000005327	PABPC4	81	91.557	ENSMGAG00000005408	PABPC4	82	91.557	Meleagris_gallopavo
ENSCHOG00000005327	PABPC4	64	95.455	ENSMAUG00000019763	-	65	95.455	Mesocricetus_auratus
ENSCHOG00000005327	PABPC4	53	80.488	ENSMAUG00000004089	-	89	80.488	Mesocricetus_auratus
ENSCHOG00000005327	PABPC4	61	86.082	ENSMAUG00000001295	-	90	86.082	Mesocricetus_auratus
ENSCHOG00000005327	PABPC4	81	91.316	ENSMICG00000036729	-	92	91.153	Microcebus_murinus
ENSCHOG00000005327	PABPC4	69	97.889	ENSMICG00000016633	-	87	97.889	Microcebus_murinus
ENSCHOG00000005327	PABPC4	80	96.570	ENSMOCG00000006763	Pabpc4	88	96.570	Microtus_ochrogaster
ENSCHOG00000005327	PABPC4	79	89.757	ENSMMOG00000002363	pabpc4	88	89.211	Mola_mola
ENSCHOG00000005327	PABPC4	79	91.053	ENSMODG00000017657	-	83	91.053	Monodelphis_domestica
ENSCHOG00000005327	PABPC4	53	73.186	ENSMODG00000018051	-	89	73.186	Monodelphis_domestica
ENSCHOG00000005327	PABPC4	79	89.488	ENSMALG00000011017	pabpc4	86	88.947	Monopterus_albus
ENSCHOG00000005327	PABPC4	81	96.306	MGP_CAROLIEiJ_G0026435	-	100	99.029	Mus_caroli
ENSCHOG00000005327	PABPC4	77	90.423	MGP_CAROLIEiJ_G0024864	-	80	93.275	Mus_caroli
ENSCHOG00000005327	PABPC4	81	95.778	ENSMUSG00000011257	Pabpc4	98	98.058	Mus_musculus
ENSCHOG00000005327	PABPC4	81	96.042	MGP_PahariEiJ_G0028765	Pabpc4	100	99.029	Mus_pahari
ENSCHOG00000005327	PABPC4	81	92.308	MGP_SPRETEiJ_G0027415	Pabpc4	100	98.058	Mus_spretus
ENSCHOG00000005327	PABPC4	81	97.889	ENSMPUG00000014414	-	82	97.889	Mustela_putorius_furo
ENSCHOG00000005327	PABPC4	77	56.842	ENSMPUG00000006836	-	76	56.842	Mustela_putorius_furo
ENSCHOG00000005327	PABPC4	81	97.625	ENSMLUG00000012068	PABPC4	89	97.625	Myotis_lucifugus
ENSCHOG00000005327	PABPC4	81	97.361	ENSNGAG00000018292	Pabpc4	89	97.361	Nannospalax_galili
ENSCHOG00000005327	PABPC4	58	80.513	ENSNBRG00000010047	-	84	80.513	Neolamprologus_brichardi
ENSCHOG00000005327	PABPC4	54	91.447	ENSNBRG00000009708	pabpc4	98	91.447	Neolamprologus_brichardi
ENSCHOG00000005327	PABPC4	81	97.625	ENSNLEG00000011928	PABPC4	86	97.625	Nomascus_leucogenys
ENSCHOG00000005327	PABPC4	74	97.098	ENSOPRG00000011984	PABPC4	81	97.098	Ochotona_princeps
ENSCHOG00000005327	PABPC4	51	82.407	ENSODEG00000013457	-	99	82.407	Octodon_degus
ENSCHOG00000005327	PABPC4	81	97.625	ENSODEG00000006592	-	88	97.625	Octodon_degus
ENSCHOG00000005327	PABPC4	81	95.203	ENSODEG00000017434	-	79	95.203	Octodon_degus
ENSCHOG00000005327	PABPC4	79	90.296	ENSONIG00000008176	pabpc4	87	89.737	Oreochromis_niloticus
ENSCHOG00000005327	PABPC4	81	91.029	ENSOANG00000010001	PABPC4	86	91.029	Ornithorhynchus_anatinus
ENSCHOG00000005327	PABPC4	76	97.361	ENSOCUG00000000562	PABPC4	72	97.361	Oryctolagus_cuniculus
ENSCHOG00000005327	PABPC4	79	90.734	ENSORLG00000017479	pabpc4	86	88.684	Oryzias_latipes
ENSCHOG00000005327	PABPC4	79	90.734	ENSORLG00020018644	pabpc4	89	88.421	Oryzias_latipes_hni
ENSCHOG00000005327	PABPC4	79	90.734	ENSORLG00015015042	pabpc4	86	88.947	Oryzias_latipes_hsok
ENSCHOG00000005327	PABPC4	79	89.757	ENSOMEG00000014410	pabpc4	89	88.684	Oryzias_melastigma
ENSCHOG00000005327	PABPC4	81	97.889	ENSOGAG00000004067	PABPC4	84	97.889	Otolemur_garnettii
ENSCHOG00000005327	PABPC4	81	97.098	ENSOARG00000020060	PABPC4	82	97.098	Ovis_aries
ENSCHOG00000005327	PABPC4	81	97.361	ENSPPAG00000043625	PABPC4	86	97.361	Pan_paniscus
ENSCHOG00000005327	PABPC4	81	97.889	ENSPPRG00000024727	PABPC4	86	97.889	Panthera_pardus
ENSCHOG00000005327	PABPC4	81	97.889	ENSPTIG00000005829	PABPC4	86	97.889	Panthera_tigris_altaica
ENSCHOG00000005327	PABPC4	81	97.361	ENSPTRG00000000573	PABPC4	86	97.361	Pan_troglodytes
ENSCHOG00000005327	PABPC4	81	97.625	ENSPANG00000009484	PABPC4	86	97.625	Papio_anubis
ENSCHOG00000005327	PABPC4	81	89.737	ENSPKIG00000025356	pabpc4	87	89.737	Paramormyrops_kingsleyae
ENSCHOG00000005327	PABPC4	81	91.557	ENSPSIG00000016892	PABPC4	86	91.557	Pelodiscus_sinensis
ENSCHOG00000005327	PABPC4	80	89.211	ENSPMGG00000009073	pabpc4	90	89.211	Periophthalmus_magnuspinnatus
ENSCHOG00000005327	PABPC4	81	92.348	ENSPEMG00000024193	-	85	92.348	Peromyscus_maniculatus_bairdii
ENSCHOG00000005327	PABPC4	81	96.570	ENSPEMG00000023569	-	86	96.570	Peromyscus_maniculatus_bairdii
ENSCHOG00000005327	PABPC4	77	82.558	ENSPMAG00000007885	pabpc4	81	80.198	Petromyzon_marinus
ENSCHOG00000005327	PABPC4	67	82.759	ENSPMAG00000002836	pabpc4	79	79.016	Petromyzon_marinus
ENSCHOG00000005327	PABPC4	79	91.293	ENSPCIG00000020674	PABPC4	99	91.293	Phascolarctos_cinereus
ENSCHOG00000005327	PABPC4	79	89.757	ENSPFOG00000002682	pabpc4	87	89.211	Poecilia_formosa
ENSCHOG00000005327	PABPC4	79	89.757	ENSPLAG00000010112	pabpc4	87	89.211	Poecilia_latipinna
ENSCHOG00000005327	PABPC4	78	89.757	ENSPMEG00000019739	pabpc4	87	89.211	Poecilia_mexicana
ENSCHOG00000005327	PABPC4	79	89.757	ENSPREG00000001589	pabpc4	87	89.211	Poecilia_reticulata
ENSCHOG00000005327	PABPC4	81	97.361	ENSPPYG00000001506	PABPC4	82	97.361	Pongo_abelii
ENSCHOG00000005327	PABPC4	81	93.269	ENSPCAG00000003341	PABPC4	82	93.269	Procavia_capensis
ENSCHOG00000005327	PABPC4	79	89.109	ENSPCOG00000025882	-	88	89.109	Propithecus_coquereli
ENSCHOG00000005327	PABPC4	81	97.889	ENSPCOG00000023725	-	86	97.889	Propithecus_coquereli
ENSCHOG00000005327	PABPC4	81	97.361	ENSPVAG00000002187	PABPC4	81	97.361	Pteropus_vampyrus
ENSCHOG00000005327	PABPC4	79	90.027	ENSPNYG00000006134	pabpc4	87	89.474	Pundamilia_nyererei
ENSCHOG00000005327	PABPC4	79	89.757	ENSPNAG00000024355	pabpc4	86	89.211	Pygocentrus_nattereri
ENSCHOG00000005327	PABPC4	81	96.306	ENSRNOG00000015642	Pabpc4	84	96.306	Rattus_norvegicus
ENSCHOG00000005327	PABPC4	81	93.668	ENSRNOG00000028592	AABR07035074.1	84	93.668	Rattus_norvegicus
ENSCHOG00000005327	PABPC4	81	97.625	ENSRBIG00000039761	PABPC4	86	97.625	Rhinopithecus_bieti
ENSCHOG00000005327	PABPC4	81	97.625	ENSRROG00000033355	PABPC4	86	97.625	Rhinopithecus_roxellana
ENSCHOG00000005327	PABPC4	81	97.361	ENSSBOG00000026193	PABPC4	86	97.361	Saimiri_boliviensis_boliviensis
ENSCHOG00000005327	PABPC4	79	91.293	ENSSHAG00000018139	PABPC4	86	91.293	Sarcophilus_harrisii
ENSCHOG00000005327	PABPC4	80	89.211	ENSSFOG00015023514	pabpc4	85	89.211	Scleropages_formosus
ENSCHOG00000005327	PABPC4	79	88.949	ENSSMAG00000009007	pabpc4	85	88.421	Scophthalmus_maximus
ENSCHOG00000005327	PABPC4	79	89.218	ENSSDUG00000012683	pabpc4	91	89.167	Seriola_dumerili
ENSCHOG00000005327	PABPC4	79	89.218	ENSSLDG00000013025	pabpc4	90	89.167	Seriola_lalandi_dorsalis
ENSCHOG00000005327	PABPC4	81	96.570	ENSSARG00000000310	PABPC4	76	96.570	Sorex_araneus
ENSCHOG00000005327	PABPC4	81	91.029	ENSSPUG00000003204	PABPC4	87	91.029	Sphenodon_punctatus
ENSCHOG00000005327	PABPC4	80	88.947	ENSSPAG00000009252	pabpc4	95	88.947	Stegastes_partitus
ENSCHOG00000005327	PABPC4	81	97.625	ENSSSCG00000003660	-	86	97.625	Sus_scrofa
ENSCHOG00000005327	PABPC4	79	53.846	ENSSSCG00000036170	-	84	53.846	Sus_scrofa
ENSCHOG00000005327	PABPC4	81	90.501	ENSTGUG00000001266	PABPC4	82	90.501	Taeniopygia_guttata
ENSCHOG00000005327	PABPC4	79	89.488	ENSTRUG00000005907	pabpc4	86	88.947	Takifugu_rubripes
ENSCHOG00000005327	PABPC4	76	90.571	ENSTNIG00000016902	pabpc4	82	90.571	Tetraodon_nigroviridis
ENSCHOG00000005327	PABPC4	81	93.269	ENSTBEG00000009035	PABPC4	81	93.269	Tupaia_belangeri
ENSCHOG00000005327	PABPC4	81	93.269	ENSTTRG00000014340	PABPC4	80	93.269	Tursiops_truncatus
ENSCHOG00000005327	PABPC4	81	97.889	ENSUAMG00000000303	PABPC4	86	97.889	Ursus_americanus
ENSCHOG00000005327	PABPC4	81	97.889	ENSUMAG00000019585	PABPC4	99	99.176	Ursus_maritimus
ENSCHOG00000005327	PABPC4	81	97.889	ENSVVUG00000005215	PABPC4	86	97.889	Vulpes_vulpes
ENSCHOG00000005327	PABPC4	60	97.087	ENSXETG00000027221	-	98	97.087	Xenopus_tropicalis
ENSCHOG00000005327	PABPC4	81	84.656	ENSXETG00000010946	pabpc4	87	84.656	Xenopus_tropicalis
ENSCHOG00000005327	PABPC4	80	88.949	ENSXCOG00000013190	pabpc4	96	89.623	Xiphophorus_couchianus
ENSCHOG00000005327	PABPC4	79	89.488	ENSXMAG00000019007	pabpc4	87	88.947	Xiphophorus_maculatus