EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000005354 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 56569 bases
Position: chrGeneScaffold_3885:9689-66257
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000004754	La	PF05383.17	8.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000005379	LARP1B-201	2637	-	ENSCHOP00000004754	879 (aa)	-	UPI0001F9F52A

Gene Model

Click here to download ENSCHOG00000005354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000005354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000005354	LARP1B	74	55.460	ENSCHOG00000012716	LARP1	68	55.316

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000005354	LARP1B	99	81.114	ENSG00000138709	LARP1B	96	100.000	Homo_sapiens
ENSCHOG00000005354	LARP1B	97	53.429	ENSAPOG00000020101	larp1b	84	52.694	Acanthochromis_polyacanthus
ENSCHOG00000005354	LARP1B	62	82.396	ENSAMEG00000002748	LARP1B	99	82.577	Ailuropoda_melanoleuca
ENSCHOG00000005354	LARP1B	96	53.341	ENSACIG00000023890	larp1b	82	52.871	Amphilophus_citrinellus
ENSCHOG00000005354	LARP1B	90	54.090	ENSAOCG00000014268	larp1b	82	54.345	Amphiprion_ocellaris
ENSCHOG00000005354	LARP1B	97	53.370	ENSAPEG00000004126	larp1b	83	53.112	Amphiprion_percula
ENSCHOG00000005354	LARP1B	99	52.034	ENSATEG00000017849	larp1b	85	51.801	Anabas_testudineus
ENSCHOG00000005354	LARP1B	89	68.807	ENSAPLG00000010129	LARP1B	91	69.171	Anas_platyrhynchos
ENSCHOG00000005354	LARP1B	92	69.988	ENSACAG00000011338	LARP1B	86	69.988	Anolis_carolinensis
ENSCHOG00000005354	LARP1B	86	77.588	ENSANAG00000034618	LARP1B	88	77.792	Aotus_nancymaae
ENSCHOG00000005354	LARP1B	83	58.106	ENSACLG00000011948	larp1b	69	58.003	Astatotilapia_calliptera
ENSCHOG00000005354	LARP1B	85	56.147	ENSAMXG00000006805	larp1b	83	51.389	Astyanax_mexicanus
ENSCHOG00000005354	LARP1B	100	81.679	ENSBTAG00000012135	LARP1B	98	80.312	Bos_taurus
ENSCHOG00000005354	LARP1B	99	79.759	ENSCJAG00000003338	LARP1B	99	79.869	Callithrix_jacchus
ENSCHOG00000005354	LARP1B	100	82.879	ENSCAFG00000003831	LARP1B	100	82.462	Canis_familiaris
ENSCHOG00000005354	LARP1B	100	82.879	ENSCAFG00020018899	LARP1B	98	82.988	Canis_lupus_dingo
ENSCHOG00000005354	LARP1B	100	81.858	ENSCHIG00000023144	LARP1B	98	81.749	Capra_hircus
ENSCHOG00000005354	LARP1B	99	80.525	ENSCCAG00000021948	LARP1B	99	80.635	Cebus_capucinus
ENSCHOG00000005354	LARP1B	99	80.240	ENSCATG00000013541	LARP1B	100	80.349	Cercocebus_atys
ENSCHOG00000005354	LARP1B	99	81.046	ENSCSAG00000003582	LARP1B	100	81.155	Chlorocebus_sabaeus
ENSCHOG00000005354	LARP1B	99	70.000	ENSCPBG00000017480	LARP1B	86	70.435	Chrysemys_picta_bellii
ENSCHOG00000005354	LARP1B	99	80.895	ENSCANG00000026958	LARP1B	100	81.004	Colobus_angolensis_palliatus
ENSCHOG00000005354	LARP1B	77	57.379	ENSCSEG00000013519	larp1b	70	56.413	Cynoglossus_semilaevis
ENSCHOG00000005354	LARP1B	97	52.137	ENSCVAG00000005046	larp1b	75	56.485	Cyprinodon_variegatus
ENSCHOG00000005354	LARP1B	83	56.798	ENSDARG00000061169	larp1b	79	52.137	Danio_rerio
ENSCHOG00000005354	LARP1B	57	82.779	ENSDNOG00000018765	-	99	82.975	Dasypus_novemcinctus
ENSCHOG00000005354	LARP1B	83	80.822	ENSETEG00000012497	LARP1B	84	80.822	Echinops_telfairi
ENSCHOG00000005354	LARP1B	73	53.134	ENSEBUG00000003668	larp1b	71	52.589	Eptatretus_burgeri
ENSCHOG00000005354	LARP1B	100	81.025	ENSEASG00005018106	LARP1B	97	83.917	Equus_asinus_asinus
ENSCHOG00000005354	LARP1B	100	80.916	ENSECAG00000001088	LARP1B	81	80.916	Equus_caballus
ENSCHOG00000005354	LARP1B	60	70.064	ENSELUG00000023774	larp1b	70	69.620	Esox_lucius
ENSCHOG00000005354	LARP1B	58	80.312	ENSFCAG00000014650	-	98	79.297	Felis_catus
ENSCHOG00000005354	LARP1B	99	63.210	ENSFALG00000008098	LARP1B	98	62.882	Ficedula_albicollis
ENSCHOG00000005354	LARP1B	99	52.620	ENSFHEG00000010264	larp1b	80	52.620	Fundulus_heteroclitus
ENSCHOG00000005354	LARP1B	69	57.823	ENSGMOG00000005207	larp1b	62	58.163	Gadus_morhua
ENSCHOG00000005354	LARP1B	98	61.978	ENSGALG00000010207	LARP1B	87	62.527	Gallus_gallus
ENSCHOG00000005354	LARP1B	84	59.021	ENSGAFG00000012012	larp1b	88	57.673	Gambusia_affinis
ENSCHOG00000005354	LARP1B	76	56.865	ENSGACG00000004609	larp1b	71	56.549	Gasterosteus_aculeatus
ENSCHOG00000005354	LARP1B	100	69.055	ENSGAGG00000017209	LARP1B	85	70.033	Gopherus_agassizii
ENSCHOG00000005354	LARP1B	99	81.332	ENSGGOG00000015900	LARP1B	100	81.441	Gorilla_gorilla
ENSCHOG00000005354	LARP1B	96	53.097	ENSHBUG00000009730	larp1b	81	52.845	Haplochromis_burtoni
ENSCHOG00000005354	LARP1B	75	57.143	ENSHCOG00000000918	larp1b	96	57.571	Hippocampus_comes
ENSCHOG00000005354	LARP1B	85	57.125	ENSIPUG00000012138	larp1b	82	51.829	Ictalurus_punctatus
ENSCHOG00000005354	LARP1B	96	51.451	ENSKMAG00000011589	larp1b	84	52.909	Kryptolebias_marmoratus
ENSCHOG00000005354	LARP1B	97	53.458	ENSLBEG00000005655	larp1b	84	52.897	Labrus_bergylta
ENSCHOG00000005354	LARP1B	99	66.520	ENSLACG00000015247	LARP1B	99	61.893	Latimeria_chalumnae
ENSCHOG00000005354	LARP1B	84	69.620	ENSLOCG00000010684	larp1b	77	69.747	Lepisosteus_oculatus
ENSCHOG00000005354	LARP1B	99	81.659	ENSMFAG00000002218	LARP1B	100	81.769	Macaca_fascicularis
ENSCHOG00000005354	LARP1B	99	81.550	ENSMMUG00000021347	LARP1B	100	81.659	Macaca_mulatta
ENSCHOG00000005354	LARP1B	86	83.562	ENSMNEG00000030406	LARP1B	95	83.562	Macaca_nemestrina
ENSCHOG00000005354	LARP1B	99	81.550	ENSMLEG00000009306	LARP1B	100	81.659	Mandrillus_leucophaeus
ENSCHOG00000005354	LARP1B	80	57.467	ENSMAMG00000000081	larp1b	85	52.903	Mastacembelus_armatus
ENSCHOG00000005354	LARP1B	75	59.456	ENSMZEG00005002545	larp1b	94	58.530	Maylandia_zebra
ENSCHOG00000005354	LARP1B	88	62.055	ENSMGAG00000004809	LARP1B	98	56.604	Meleagris_gallopavo
ENSCHOG00000005354	LARP1B	100	83.297	ENSMICG00000036111	LARP1B	100	83.406	Microcebus_murinus
ENSCHOG00000005354	LARP1B	50	76.190	ENSMICG00000028052	-	89	71.018	Microcebus_murinus
ENSCHOG00000005354	LARP1B	100	77.850	ENSMODG00000012300	LARP1B	81	78.393	Monodelphis_domestica
ENSCHOG00000005354	LARP1B	100	52.609	ENSMALG00000003638	larp1b	85	52.872	Monopterus_albus
ENSCHOG00000005354	LARP1B	100	82.007	ENSMPUG00000017365	LARP1B	81	82.116	Mustela_putorius_furo
ENSCHOG00000005354	LARP1B	91	83.117	ENSMLUG00000010229	LARP1B	90	83.117	Myotis_lucifugus
ENSCHOG00000005354	LARP1B	82	60.055	ENSNBRG00000023846	larp1b	77	59.783	Neolamprologus_brichardi
ENSCHOG00000005354	LARP1B	99	80.480	ENSNLEG00000013819	LARP1B	100	80.589	Nomascus_leucogenys
ENSCHOG00000005354	LARP1B	82	79.424	ENSMEUG00000010308	LARP1B	83	79.424	Notamacropus_eugenii
ENSCHOG00000005354	LARP1B	86	71.970	ENSOPRG00000005478	LARP1B	86	72.096	Ochotona_princeps
ENSCHOG00000005354	LARP1B	83	56.962	ENSONIG00000012386	larp1b	79	57.761	Oreochromis_niloticus
ENSCHOG00000005354	LARP1B	100	78.712	ENSOCUG00000013330	LARP1B	98	78.821	Oryctolagus_cuniculus
ENSCHOG00000005354	LARP1B	77	56.334	ENSORLG00000017954	larp1b	83	51.432	Oryzias_latipes
ENSCHOG00000005354	LARP1B	80	54.722	ENSORLG00020013081	larp1b	71	56.040	Oryzias_latipes_hni
ENSCHOG00000005354	LARP1B	80	55.701	ENSORLG00015009580	larp1b	83	51.706	Oryzias_latipes_hsok
ENSCHOG00000005354	LARP1B	78	57.572	ENSOMEG00000004210	larp1b	81	52.909	Oryzias_melastigma
ENSCHOG00000005354	LARP1B	95	81.350	ENSOGAG00000005771	LARP1B	98	80.892	Otolemur_garnettii
ENSCHOG00000005354	LARP1B	99	81.510	ENSOARG00000015300	LARP1B	100	81.400	Ovis_aries
ENSCHOG00000005354	LARP1B	99	81.223	ENSPPAG00000030439	LARP1B	100	81.332	Pan_paniscus
ENSCHOG00000005354	LARP1B	58	80.507	ENSPPRG00000002743	-	98	79.492	Panthera_pardus
ENSCHOG00000005354	LARP1B	58	80.507	ENSPTIG00000011225	LARP1B	98	79.492	Panthera_tigris_altaica
ENSCHOG00000005354	LARP1B	99	81.441	ENSPTRG00000016437	LARP1B	100	81.550	Pan_troglodytes
ENSCHOG00000005354	LARP1B	99	81.550	ENSPANG00000012488	LARP1B	100	81.659	Papio_anubis
ENSCHOG00000005354	LARP1B	96	47.841	ENSPKIG00000014360	larp1b	89	48.218	Paramormyrops_kingsleyae
ENSCHOG00000005354	LARP1B	95	70.957	ENSPSIG00000012885	LARP1B	93	70.843	Pelodiscus_sinensis
ENSCHOG00000005354	LARP1B	78	57.655	ENSPMGG00000007207	larp1b	91	56.907	Periophthalmus_magnuspinnatus
ENSCHOG00000005354	LARP1B	75	54.470	ENSPMAG00000002700	larp1b	97	48.305	Petromyzon_marinus
ENSCHOG00000005354	LARP1B	100	77.065	ENSPCIG00000026516	LARP1B	98	83.089	Phascolarctos_cinereus
ENSCHOG00000005354	LARP1B	83	58.417	ENSPFOG00000019519	larp1b	69	58.668	Poecilia_formosa
ENSCHOG00000005354	LARP1B	86	58.500	ENSPLAG00000007115	larp1b	68	60.182	Poecilia_latipinna
ENSCHOG00000005354	LARP1B	97	54.646	ENSPMEG00000001224	larp1b	80	54.535	Poecilia_mexicana
ENSCHOG00000005354	LARP1B	100	77.293	ENSPCAG00000007546	LARP1B	100	77.402	Procavia_capensis
ENSCHOG00000005354	LARP1B	100	74.011	ENSPCOG00000021874	LARP1B	98	80.747	Propithecus_coquereli
ENSCHOG00000005354	LARP1B	100	75.705	ENSPVAG00000005373	LARP1B	100	75.027	Pteropus_vampyrus
ENSCHOG00000005354	LARP1B	75	59.169	ENSPNYG00000017357	larp1b	94	58.136	Pundamilia_nyererei
ENSCHOG00000005354	LARP1B	80	59.186	ENSPNAG00000008823	larp1b	84	53.115	Pygocentrus_nattereri
ENSCHOG00000005354	LARP1B	58	78.516	ENSRBIG00000039982	-	99	77.930	Rhinopithecus_bieti
ENSCHOG00000005354	LARP1B	99	81.332	ENSRROG00000030771	LARP1B	100	81.441	Rhinopithecus_roxellana
ENSCHOG00000005354	LARP1B	76	78.390	ENSSHAG00000014474	LARP1B	99	79.042	Sarcophilus_harrisii
ENSCHOG00000005354	LARP1B	96	51.441	ENSSMAG00000006347	larp1b	93	50.463	Scophthalmus_maximus
ENSCHOG00000005354	LARP1B	96	53.488	ENSSDUG00000004182	larp1b	81	53.560	Seriola_dumerili
ENSCHOG00000005354	LARP1B	78	56.510	ENSSLDG00000014613	larp1b	70	56.259	Seriola_lalandi_dorsalis
ENSCHOG00000005354	LARP1B	97	62.329	ENSSPUG00000011837	LARP1B	97	63.268	Sphenodon_punctatus
ENSCHOG00000005354	LARP1B	97	52.706	ENSSPAG00000017772	larp1b	82	52.814	Stegastes_partitus
ENSCHOG00000005354	LARP1B	100	80.262	ENSSSCG00000034280	LARP1B	99	94.845	Sus_scrofa
ENSCHOG00000005354	LARP1B	91	66.158	ENSTGUG00000002098	-	97	63.105	Taeniopygia_guttata
ENSCHOG00000005354	LARP1B	79	56.852	ENSTRUG00000005612	larp1b	82	51.641	Takifugu_rubripes
ENSCHOG00000005354	LARP1B	77	57.588	ENSTNIG00000012398	larp1b	89	51.627	Tetraodon_nigroviridis
ENSCHOG00000005354	LARP1B	81	81.356	ENSTBEG00000004177	LARP1B	83	71.186	Tupaia_belangeri
ENSCHOG00000005354	LARP1B	86	81.430	ENSTTRG00000012984	LARP1B	87	81.556	Tursiops_truncatus
ENSCHOG00000005354	LARP1B	100	82.007	ENSUMAG00000007373	LARP1B	98	82.116	Ursus_maritimus
ENSCHOG00000005354	LARP1B	89	84.932	ENSVPAG00000007223	LARP1B	90	78.273	Vicugna_pacos
ENSCHOG00000005354	LARP1B	100	82.770	ENSVVUG00000011307	LARP1B	99	82.353	Vulpes_vulpes
ENSCHOG00000005354	LARP1B	98	56.146	ENSXETG00000022512	larp1b	86	56.146	Xenopus_tropicalis
ENSCHOG00000005354	LARP1B	72	55.752	ENSXCOG00000004435	larp1b	68	56.083	Xiphophorus_couchianus
ENSCHOG00000005354	LARP1B	97	52.632	ENSXMAG00000008150	larp1b	81	52.954	Xiphophorus_maculatus