EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000005587 (Gene tree)
Gene ID: -
Gene Symbol: THUMPD1
Alias: FLJ20274|Tan1
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 4587 bases
Position: chrscaffold_29112:4072-8658
Accession: 23807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000004946	THUMP	PF02926.17	2.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000005602	THUMPD1-201	1074	-	ENSCHOP00000004946	357 (aa)	-	UPI0001F9F2CB

Gene Model

Click here to download ENSCHOG00000005587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000005587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000005587	THUMPD1	100	86.592	ENSG00000066654	THUMPD1	100	86.592	Homo_sapiens
ENSCHOG00000005587	THUMPD1	82	55.932	ENSAPOG00000008440	thumpd1	88	56.610	Acanthochromis_polyacanthus
ENSCHOG00000005587	THUMPD1	100	89.385	ENSAMEG00000006257	THUMPD1	99	89.385	Ailuropoda_melanoleuca
ENSCHOG00000005587	THUMPD1	76	58.242	ENSACIG00000024395	thumpd1	81	59.341	Amphilophus_citrinellus
ENSCHOG00000005587	THUMPD1	88	52.830	ENSAOCG00000003509	thumpd1	95	53.459	Amphiprion_ocellaris
ENSCHOG00000005587	THUMPD1	82	55.254	ENSAPEG00000010515	thumpd1	88	55.932	Amphiprion_percula
ENSCHOG00000005587	THUMPD1	86	53.846	ENSATEG00000004737	thumpd1	95	54.487	Anabas_testudineus
ENSCHOG00000005587	THUMPD1	79	72.378	ENSAPLG00000015259	THUMPD1	100	73.077	Anas_platyrhynchos
ENSCHOG00000005587	THUMPD1	80	67.577	ENSACAG00000009625	-	90	68.942	Anolis_carolinensis
ENSCHOG00000005587	THUMPD1	99	68.079	ENSANAG00000027311	-	100	68.079	Aotus_nancymaae
ENSCHOG00000005587	THUMPD1	100	85.475	ENSANAG00000026882	-	100	85.475	Aotus_nancymaae
ENSCHOG00000005587	THUMPD1	100	70.391	ENSANAG00000027040	-	100	70.391	Aotus_nancymaae
ENSCHOG00000005587	THUMPD1	78	54.266	ENSACLG00000004830	thumpd1	95	53.595	Astatotilapia_calliptera
ENSCHOG00000005587	THUMPD1	91	52.410	ENSAMXG00000012356	thumpd1	98	53.313	Astyanax_mexicanus
ENSCHOG00000005587	THUMPD1	99	87.675	ENSBTAG00000047673	THUMPD1	100	87.675	Bos_taurus
ENSCHOG00000005587	THUMPD1	96	85.756	ENSCJAG00000009499	THUMPD1	100	85.196	Callithrix_jacchus
ENSCHOG00000005587	THUMPD1	100	87.709	ENSCAFG00000017985	THUMPD1	99	87.709	Canis_familiaris
ENSCHOG00000005587	THUMPD1	100	87.709	ENSCAFG00020021861	THUMPD1	99	87.709	Canis_lupus_dingo
ENSCHOG00000005587	THUMPD1	99	88.483	ENSCHIG00000010134	THUMPD1	99	88.483	Capra_hircus
ENSCHOG00000005587	THUMPD1	100	86.034	ENSTSYG00000011537	THUMPD1	100	86.034	Carlito_syrichta
ENSCHOG00000005587	THUMPD1	96	82.558	ENSCPOG00000023684	-	100	82.123	Cavia_porcellus
ENSCHOG00000005587	THUMPD1	96	82.558	ENSCPOG00000008919	-	100	82.123	Cavia_porcellus
ENSCHOG00000005587	THUMPD1	100	79.330	ENSCCAG00000019379	-	86	79.330	Cebus_capucinus
ENSCHOG00000005587	THUMPD1	100	84.916	ENSCCAG00000030205	THUMPD1	100	84.916	Cebus_capucinus
ENSCHOG00000005587	THUMPD1	99	71.191	ENSCATG00000020844	-	99	71.191	Cercocebus_atys
ENSCHOG00000005587	THUMPD1	100	85.475	ENSCATG00000040309	THUMPD1	100	85.475	Cercocebus_atys
ENSCHOG00000005587	THUMPD1	100	82.353	ENSCLAG00000016508	THUMPD1	100	82.353	Chinchilla_lanigera
ENSCHOG00000005587	THUMPD1	99	85.434	ENSCSAG00000007610	THUMPD1	99	85.434	Chlorocebus_sabaeus
ENSCHOG00000005587	THUMPD1	100	68.785	ENSCSAG00000009860	-	80	68.785	Chlorocebus_sabaeus
ENSCHOG00000005587	THUMPD1	72	81.679	ENSCPBG00000019055	THUMPD1	74	82.824	Chrysemys_picta_bellii
ENSCHOG00000005587	THUMPD1	75	30.420	ENSCING00000021274	-	100	30.420	Ciona_intestinalis
ENSCHOG00000005587	THUMPD1	87	75.080	ENSCANG00000035822	-	100	75.080	Colobus_angolensis_palliatus
ENSCHOG00000005587	THUMPD1	87	77.814	ENSCANG00000038770	THUMPD1	100	77.814	Colobus_angolensis_palliatus
ENSCHOG00000005587	THUMPD1	100	81.844	ENSCGRG00001014829	Thumpd1	100	81.844	Cricetulus_griseus_chok1gshd
ENSCHOG00000005587	THUMPD1	100	81.844	ENSCGRG00000000060	Thumpd1	100	81.844	Cricetulus_griseus_crigri
ENSCHOG00000005587	THUMPD1	82	54.915	ENSCSEG00000002041	thumpd1	94	54.915	Cynoglossus_semilaevis
ENSCHOG00000005587	THUMPD1	71	62.308	ENSCVAG00000014960	thumpd1	97	52.890	Cyprinodon_variegatus
ENSCHOG00000005587	THUMPD1	68	59.600	ENSDARG00000100264	thumpd1	72	59.921	Danio_rerio
ENSCHOG00000005587	THUMPD1	100	93.557	ENSDNOG00000043510	THUMPD1	100	93.557	Dasypus_novemcinctus
ENSCHOG00000005587	THUMPD1	99	82.073	ENSDORG00000028216	Thumpd1	99	82.073	Dipodomys_ordii
ENSCHOG00000005587	THUMPD1	85	31.250	FBgn0035532	CG15014	93	31.804	Drosophila_melanogaster
ENSCHOG00000005587	THUMPD1	96	80.290	ENSETEG00000002763	THUMPD1	84	78.611	Echinops_telfairi
ENSCHOG00000005587	THUMPD1	76	42.955	ENSEBUG00000011011	THUMPD1	77	42.568	Eptatretus_burgeri
ENSCHOG00000005587	THUMPD1	55	83.249	ENSEASG00005017428	-	100	83.249	Equus_asinus_asinus
ENSCHOG00000005587	THUMPD1	100	85.994	ENSECAG00000005354	THUMPD1	100	85.994	Equus_caballus
ENSCHOG00000005587	THUMPD1	100	82.920	ENSEEUG00000011256	THUMPD1	88	83.747	Erinaceus_europaeus
ENSCHOG00000005587	THUMPD1	93	52.819	ENSELUG00000013612	thumpd1	80	52.493	Esox_lucius
ENSCHOG00000005587	THUMPD1	100	87.709	ENSFCAG00000039296	THUMPD1	100	87.709	Felis_catus
ENSCHOG00000005587	THUMPD1	66	78.903	ENSFALG00000014029	THUMPD1	96	74.254	Ficedula_albicollis
ENSCHOG00000005587	THUMPD1	71	58.915	ENSFHEG00000013319	thumpd1	74	59.302	Fundulus_heteroclitus
ENSCHOG00000005587	THUMPD1	82	57.192	ENSGMOG00000003369	thumpd1	89	57.192	Gadus_morhua
ENSCHOG00000005587	THUMPD1	71	60.311	ENSGAFG00000011000	thumpd1	80	61.089	Gambusia_affinis
ENSCHOG00000005587	THUMPD1	82	56.949	ENSGACG00000019511	thumpd1	88	57.288	Gasterosteus_aculeatus
ENSCHOG00000005587	THUMPD1	79	76.655	ENSGAGG00000008225	THUMPD1	89	77.700	Gopherus_agassizii
ENSCHOG00000005587	THUMPD1	96	62.209	ENSGGOG00000043232	-	100	62.291	Gorilla_gorilla
ENSCHOG00000005587	THUMPD1	100	87.151	ENSGGOG00000005231	-	80	87.151	Gorilla_gorilla
ENSCHOG00000005587	THUMPD1	78	53.584	ENSHBUG00000017996	thumpd1	95	53.268	Haplochromis_burtoni
ENSCHOG00000005587	THUMPD1	60	71.628	ENSHGLG00000000952	-	98	71.628	Heterocephalus_glaber_female
ENSCHOG00000005587	THUMPD1	100	83.520	ENSHGLG00000011001	-	100	83.520	Heterocephalus_glaber_female
ENSCHOG00000005587	THUMPD1	60	71.628	ENSHGLG00100010577	-	98	71.628	Heterocephalus_glaber_male
ENSCHOG00000005587	THUMPD1	100	84.078	ENSHGLG00100016023	THUMPD1	100	84.078	Heterocephalus_glaber_male
ENSCHOG00000005587	THUMPD1	68	55.556	ENSHCOG00000008618	thumpd1	56	55.556	Hippocampus_comes
ENSCHOG00000005587	THUMPD1	65	61.039	ENSIPUG00000012500	thumpd1	60	58.366	Ictalurus_punctatus
ENSCHOG00000005587	THUMPD1	100	86.592	ENSSTOG00000007011	THUMPD1	100	86.592	Ictidomys_tridecemlineatus
ENSCHOG00000005587	THUMPD1	100	81.564	ENSJJAG00000004295	-	100	81.564	Jaculus_jaculus
ENSCHOG00000005587	THUMPD1	72	52.471	ENSKMAG00000009545	thumpd1	88	45.082	Kryptolebias_marmoratus
ENSCHOG00000005587	THUMPD1	68	63.415	ENSLBEG00000009349	thumpd1	88	56.897	Labrus_bergylta
ENSCHOG00000005587	THUMPD1	73	68.056	ENSLACG00000005833	THUMPD1	91	59.884	Latimeria_chalumnae
ENSCHOG00000005587	THUMPD1	76	60.140	ENSLOCG00000000854	thumpd1	91	60.839	Lepisosteus_oculatus
ENSCHOG00000005587	THUMPD1	100	85.475	ENSLAFG00000025838	THUMPD1	100	85.475	Loxodonta_africana
ENSCHOG00000005587	THUMPD1	100	85.475	ENSMFAG00000036996	THUMPD1	100	85.475	Macaca_fascicularis
ENSCHOG00000005587	THUMPD1	87	71.519	ENSMFAG00000041474	-	100	71.519	Macaca_fascicularis
ENSCHOG00000005587	THUMPD1	87	71.203	ENSMMUG00000038414	-	100	71.203	Macaca_mulatta
ENSCHOG00000005587	THUMPD1	100	85.475	ENSMMUG00000004225	THUMPD1	100	85.475	Macaca_mulatta
ENSCHOG00000005587	THUMPD1	87	71.203	ENSMNEG00000038856	-	100	71.203	Macaca_nemestrina
ENSCHOG00000005587	THUMPD1	100	85.475	ENSMNEG00000020726	THUMPD1	100	85.475	Macaca_nemestrina
ENSCHOG00000005587	THUMPD1	100	85.196	ENSMLEG00000036436	THUMPD1	100	85.196	Mandrillus_leucophaeus
ENSCHOG00000005587	THUMPD1	87	72.293	ENSMLEG00000030012	-	99	72.293	Mandrillus_leucophaeus
ENSCHOG00000005587	THUMPD1	80	56.842	ENSMAMG00000006858	thumpd1	95	53.251	Mastacembelus_armatus
ENSCHOG00000005587	THUMPD1	78	53.584	ENSMZEG00005013693	thumpd1	95	53.268	Maylandia_zebra
ENSCHOG00000005587	THUMPD1	57	79.803	ENSMGAG00000010340	THUMPD1	99	79.803	Meleagris_gallopavo
ENSCHOG00000005587	THUMPD1	100	82.633	ENSMAUG00000013306	Thumpd1	100	82.633	Mesocricetus_auratus
ENSCHOG00000005587	THUMPD1	100	86.872	ENSMICG00000038483	-	100	86.872	Microcebus_murinus
ENSCHOG00000005587	THUMPD1	99	67.232	ENSMICG00000030865	-	96	67.232	Microcebus_murinus
ENSCHOG00000005587	THUMPD1	100	84.078	ENSMOCG00000003447	Thumpd1	100	84.078	Microtus_ochrogaster
ENSCHOG00000005587	THUMPD1	72	59.004	ENSMMOG00000011323	thumpd1	77	59.004	Mola_mola
ENSCHOG00000005587	THUMPD1	99	75.549	ENSMODG00000006971	-	98	76.923	Monodelphis_domestica
ENSCHOG00000005587	THUMPD1	99	75.000	ENSMODG00000024776	-	99	76.923	Monodelphis_domestica
ENSCHOG00000005587	THUMPD1	80	54.895	ENSMALG00000019522	thumpd1	96	54.045	Monopterus_albus
ENSCHOG00000005587	THUMPD1	100	81.844	MGP_CAROLIEiJ_G0030382	Thumpd1	100	82.682	Mus_caroli
ENSCHOG00000005587	THUMPD1	100	82.682	ENSMUSG00000030942	Thumpd1	100	82.682	Mus_musculus
ENSCHOG00000005587	THUMPD1	100	81.944	MGP_PahariEiJ_G0013593	Thumpd1	100	81.944	Mus_pahari
ENSCHOG00000005587	THUMPD1	90	83.801	ENSMLUG00000010547	THUMPD1	90	83.801	Myotis_lucifugus
ENSCHOG00000005587	THUMPD1	99	84.034	ENSNGAG00000018643	Thumpd1	100	84.034	Nannospalax_galili
ENSCHOG00000005587	THUMPD1	82	53.952	ENSNBRG00000006987	thumpd1	91	52.381	Neolamprologus_brichardi
ENSCHOG00000005587	THUMPD1	100	86.313	ENSNLEG00000012369	THUMPD1	100	86.313	Nomascus_leucogenys
ENSCHOG00000005587	THUMPD1	84	88.312	ENSOPRG00000011342	THUMPD1	72	88.312	Ochotona_princeps
ENSCHOG00000005587	THUMPD1	100	82.961	ENSODEG00000012360	THUMPD1	100	82.961	Octodon_degus
ENSCHOG00000005587	THUMPD1	71	57.198	ENSONIG00000000146	thumpd1	89	58.366	Oreochromis_niloticus
ENSCHOG00000005587	THUMPD1	99	68.044	ENSOANG00000014297	THUMPD1	100	68.044	Ornithorhynchus_anatinus
ENSCHOG00000005587	THUMPD1	63	78.571	ENSOCUG00000025354	-	100	78.571	Oryctolagus_cuniculus
ENSCHOG00000005587	THUMPD1	97	85.100	ENSOCUG00000009895	-	97	85.100	Oryctolagus_cuniculus
ENSCHOG00000005587	THUMPD1	66	62.821	ENSORLG00000027557	thumpd1	76	62.821	Oryzias_latipes
ENSCHOG00000005587	THUMPD1	66	62.821	ENSORLG00020010206	thumpd1	75	62.821	Oryzias_latipes_hni
ENSCHOG00000005587	THUMPD1	66	62.821	ENSORLG00015009581	thumpd1	89	56.294	Oryzias_latipes_hsok
ENSCHOG00000005587	THUMPD1	71	59.608	ENSOMEG00000019361	thumpd1	76	59.608	Oryzias_melastigma
ENSCHOG00000005587	THUMPD1	99	85.634	ENSOGAG00000026723	THUMPD1	99	85.634	Otolemur_garnettii
ENSCHOG00000005587	THUMPD1	99	88.235	ENSOARG00000013107	THUMPD1	99	88.235	Ovis_aries
ENSCHOG00000005587	THUMPD1	100	86.034	ENSPPAG00000033818	-	80	86.034	Pan_paniscus
ENSCHOG00000005587	THUMPD1	96	66.279	ENSPPAG00000001653	-	96	71.975	Pan_paniscus
ENSCHOG00000005587	THUMPD1	100	88.547	ENSPPRG00000014118	-	100	88.547	Panthera_pardus
ENSCHOG00000005587	THUMPD1	100	88.268	ENSPTIG00000013856	-	100	88.268	Panthera_tigris_altaica
ENSCHOG00000005587	THUMPD1	100	85.754	ENSPTRG00000007848	THUMPD1	80	85.754	Pan_troglodytes
ENSCHOG00000005587	THUMPD1	96	65.407	ENSPTRG00000046073	-	100	65.363	Pan_troglodytes
ENSCHOG00000005587	THUMPD1	100	85.475	ENSPANG00000025507	THUMPD1	100	85.475	Papio_anubis
ENSCHOG00000005587	THUMPD1	87	71.111	ENSPANG00000034881	-	99	71.111	Papio_anubis
ENSCHOG00000005587	THUMPD1	66	69.787	ENSPKIG00000014491	thumpd1	73	70.638	Paramormyrops_kingsleyae
ENSCHOG00000005587	THUMPD1	67	83.402	ENSPSIG00000012430	THUMPD1	83	84.232	Pelodiscus_sinensis
ENSCHOG00000005587	THUMPD1	72	60.076	ENSPMGG00000014479	thumpd1	90	60.837	Periophthalmus_magnuspinnatus
ENSCHOG00000005587	THUMPD1	67	65.272	ENSPEMG00000002608	-	100	65.690	Peromyscus_maniculatus_bairdii
ENSCHOG00000005587	THUMPD1	61	51.142	ENSPMAG00000001389	thumpd1	86	56.354	Petromyzon_marinus
ENSCHOG00000005587	THUMPD1	99	73.699	ENSPCIG00000029241	THUMPD1	72	75.068	Phascolarctos_cinereus
ENSCHOG00000005587	THUMPD1	86	53.994	ENSPFOG00000012649	thumpd1	97	54.633	Poecilia_formosa
ENSCHOG00000005587	THUMPD1	86	53.526	ENSPLAG00000000137	thumpd1	97	54.167	Poecilia_latipinna
ENSCHOG00000005587	THUMPD1	86	54.167	ENSPMEG00000007750	thumpd1	97	54.808	Poecilia_mexicana
ENSCHOG00000005587	THUMPD1	73	60.076	ENSPREG00000000144	thumpd1	92	58.909	Poecilia_reticulata
ENSCHOG00000005587	THUMPD1	78	84.698	ENSPPYG00000007160	-	100	84.698	Pongo_abelii
ENSCHOG00000005587	THUMPD1	78	82.270	ENSPCAG00000001534	THUMPD1	100	82.270	Procavia_capensis
ENSCHOG00000005587	THUMPD1	100	86.592	ENSPCOG00000024663	THUMPD1	100	86.592	Propithecus_coquereli
ENSCHOG00000005587	THUMPD1	100	78.333	ENSPVAG00000005659	-	100	78.333	Pteropus_vampyrus
ENSCHOG00000005587	THUMPD1	62	75.000	ENSPVAG00000003286	-	99	75.000	Pteropus_vampyrus
ENSCHOG00000005587	THUMPD1	78	53.584	ENSPNYG00000007061	thumpd1	97	52.366	Pundamilia_nyererei
ENSCHOG00000005587	THUMPD1	70	64.341	ENSPNAG00000024872	thumpd1	84	64.341	Pygocentrus_nattereri
ENSCHOG00000005587	THUMPD1	63	79.018	ENSRNOG00000014946	AABR07005588.1	100	79.018	Rattus_norvegicus
ENSCHOG00000005587	THUMPD1	87	74.760	ENSRBIG00000040136	-	100	74.760	Rhinopithecus_bieti
ENSCHOG00000005587	THUMPD1	100	85.475	ENSRBIG00000040752	THUMPD1	100	85.475	Rhinopithecus_bieti
ENSCHOG00000005587	THUMPD1	87	74.441	ENSRROG00000045699	-	100	74.441	Rhinopithecus_roxellana
ENSCHOG00000005587	THUMPD1	100	85.754	ENSRROG00000042189	THUMPD1	100	85.754	Rhinopithecus_roxellana
ENSCHOG00000005587	THUMPD1	100	85.475	ENSSBOG00000034246	THUMPD1	100	85.475	Saimiri_boliviensis_boliviensis
ENSCHOG00000005587	THUMPD1	99	74.105	ENSSHAG00000003853	THUMPD1	99	75.207	Sarcophilus_harrisii
ENSCHOG00000005587	THUMPD1	72	57.364	ENSSFOG00015007512	thumpd1	77	57.364	Scleropages_formosus
ENSCHOG00000005587	THUMPD1	86	51.111	ENSSMAG00000000723	thumpd1	95	51.111	Scophthalmus_maximus
ENSCHOG00000005587	THUMPD1	88	50.621	ENSSDUG00000014502	thumpd1	98	52.174	Seriola_dumerili
ENSCHOG00000005587	THUMPD1	88	50.932	ENSSLDG00000007694	thumpd1	98	52.484	Seriola_lalandi_dorsalis
ENSCHOG00000005587	THUMPD1	81	72.391	ENSSPUG00000005096	THUMPD1	89	73.401	Sphenodon_punctatus
ENSCHOG00000005587	THUMPD1	83	53.651	ENSSPAG00000006993	thumpd1	96	54.286	Stegastes_partitus
ENSCHOG00000005587	THUMPD1	100	86.908	ENSSSCG00000024748	THUMPD1	100	86.908	Sus_scrofa
ENSCHOG00000005587	THUMPD1	76	73.818	ENSTGUG00000009247	THUMPD1	99	74.909	Taeniopygia_guttata
ENSCHOG00000005587	THUMPD1	87	51.887	ENSTRUG00000015656	thumpd1	98	52.201	Takifugu_rubripes
ENSCHOG00000005587	THUMPD1	72	58.687	ENSTNIG00000001584	thumpd1	85	59.846	Tetraodon_nigroviridis
ENSCHOG00000005587	THUMPD1	100	85.754	ENSTBEG00000005252	THUMPD1	88	85.754	Tupaia_belangeri
ENSCHOG00000005587	THUMPD1	100	87.430	ENSTTRG00000016435	THUMPD1	100	87.430	Tursiops_truncatus
ENSCHOG00000005587	THUMPD1	63	78.125	ENSUAMG00000005779	-	100	78.125	Ursus_americanus
ENSCHOG00000005587	THUMPD1	100	86.313	ENSVPAG00000003422	THUMPD1	100	86.313	Vicugna_pacos
ENSCHOG00000005587	THUMPD1	100	87.989	ENSVVUG00000023241	THUMPD1	99	87.989	Vulpes_vulpes
ENSCHOG00000005587	THUMPD1	73	60.769	ENSXETG00000005539	thumpd1	91	60.073	Xenopus_tropicalis
ENSCHOG00000005587	THUMPD1	71	60.311	ENSXMAG00000026052	thumpd1	80	61.089	Xiphophorus_maculatus