EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000005712 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 24188 bases
Position: chrGeneScaffold_686:7286-31473
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000005052	PolyA_pol	PF01743.20	2.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000005724	TRNT1-201	1305	-	ENSCHOP00000005052	434 (aa)	-	UPI0001F9F42B

Gene Model

Click here to download ENSCHOG00000005712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000005712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000005712	TRNT1	85	90.594	ENSG00000072756	TRNT1	100	83.871	Homo_sapiens
ENSCHOG00000005712	TRNT1	82	73.333	ENSAPOG00000013687	trnt1	84	73.333	Acanthochromis_polyacanthus
ENSCHOG00000005712	TRNT1	85	92.157	ENSAMEG00000014520	TRNT1	85	92.157	Ailuropoda_melanoleuca
ENSCHOG00000005712	TRNT1	83	75.385	ENSACIG00000021706	trnt1	84	75.385	Amphilophus_citrinellus
ENSCHOG00000005712	TRNT1	83	74.359	ENSAOCG00000024612	trnt1	84	74.359	Amphiprion_ocellaris
ENSCHOG00000005712	TRNT1	79	63.077	ENSAPEG00000022627	trnt1	79	63.077	Amphiprion_percula
ENSCHOG00000005712	TRNT1	78	79.769	ENSATEG00000008928	trnt1	83	79.769	Anabas_testudineus
ENSCHOG00000005712	TRNT1	74	81.410	ENSAPLG00000004258	TRNT1	79	81.410	Anas_platyrhynchos
ENSCHOG00000005712	TRNT1	83	74.545	ENSACAG00000005657	TRNT1	83	74.545	Anolis_carolinensis
ENSCHOG00000005712	TRNT1	85	91.089	ENSANAG00000024802	TRNT1	85	91.089	Aotus_nancymaae
ENSCHOG00000005712	TRNT1	83	73.846	ENSACLG00000022227	trnt1	84	73.846	Astatotilapia_calliptera
ENSCHOG00000005712	TRNT1	82	74.737	ENSAMXG00000003960	trnt1	81	74.737	Astyanax_mexicanus
ENSCHOG00000005712	TRNT1	85	89.604	ENSBTAG00000019534	TRNT1	85	89.604	Bos_taurus
ENSCHOG00000005712	TRNT1	78	62.857	WBGene00010089	hpo-31	79	62.857	Caenorhabditis_elegans
ENSCHOG00000005712	TRNT1	85	91.089	ENSCJAG00000015466	TRNT1	85	91.089	Callithrix_jacchus
ENSCHOG00000005712	TRNT1	85	89.759	ENSCAFG00000005985	TRNT1	84	89.759	Canis_familiaris
ENSCHOG00000005712	TRNT1	85	89.759	ENSCAFG00020014746	TRNT1	84	89.759	Canis_lupus_dingo
ENSCHOG00000005712	TRNT1	85	89.604	ENSCHIG00000007030	TRNT1	84	89.604	Capra_hircus
ENSCHOG00000005712	TRNT1	85	91.566	ENSTSYG00000013390	TRNT1	85	91.566	Carlito_syrichta
ENSCHOG00000005712	TRNT1	72	89.091	ENSCAPG00000006891	TRNT1	84	89.091	Cavia_aperea
ENSCHOG00000005712	TRNT1	85	90.099	ENSCPOG00000007849	TRNT1	100	88.060	Cavia_porcellus
ENSCHOG00000005712	TRNT1	80	90.964	ENSCCAG00000002919	TRNT1	84	90.964	Cebus_capucinus
ENSCHOG00000005712	TRNT1	85	91.584	ENSCATG00000031985	TRNT1	84	91.584	Cercocebus_atys
ENSCHOG00000005712	TRNT1	85	91.089	ENSCLAG00000005186	TRNT1	94	91.089	Chinchilla_lanigera
ENSCHOG00000005712	TRNT1	85	92.079	ENSCSAG00000011052	TRNT1	85	92.079	Chlorocebus_sabaeus
ENSCHOG00000005712	TRNT1	79	86.364	ENSCPBG00000017636	TRNT1	78	86.364	Chrysemys_picta_bellii
ENSCHOG00000005712	TRNT1	78	60.116	ENSCING00000007069	-	84	60.116	Ciona_intestinalis
ENSCHOG00000005712	TRNT1	82	58.639	ENSCSAVG00000007494	-	84	58.639	Ciona_savignyi
ENSCHOG00000005712	TRNT1	85	92.079	ENSCANG00000039030	TRNT1	85	92.079	Colobus_angolensis_palliatus
ENSCHOG00000005712	TRNT1	85	90.303	ENSCGRG00001009998	Trnt1	85	90.303	Cricetulus_griseus_chok1gshd
ENSCHOG00000005712	TRNT1	85	90.303	ENSCGRG00000013410	Trnt1	95	89.604	Cricetulus_griseus_crigri
ENSCHOG00000005712	TRNT1	78	80.114	ENSCSEG00000008157	trnt1	78	82.468	Cynoglossus_semilaevis
ENSCHOG00000005712	TRNT1	78	78.977	ENSCVAG00000019770	trnt1	80	78.977	Cyprinodon_variegatus
ENSCHOG00000005712	TRNT1	82	74.737	ENSDARG00000075297	trnt1	81	74.737	Danio_rerio
ENSCHOG00000005712	TRNT1	85	93.069	ENSDNOG00000008837	TRNT1	85	93.069	Dasypus_novemcinctus
ENSCHOG00000005712	TRNT1	85	87.624	ENSDORG00000014035	Trnt1	85	87.624	Dipodomys_ordii
ENSCHOG00000005712	TRNT1	77	65.896	FBgn0037369	CG2100	70	65.896	Drosophila_melanogaster
ENSCHOG00000005712	TRNT1	77	71.676	ENSEBUG00000012779	-	79	71.676	Eptatretus_burgeri
ENSCHOG00000005712	TRNT1	85	91.089	ENSEASG00005003577	TRNT1	85	91.089	Equus_asinus_asinus
ENSCHOG00000005712	TRNT1	85	91.584	ENSECAG00000014420	TRNT1	85	91.584	Equus_caballus
ENSCHOG00000005712	TRNT1	85	89.157	ENSEEUG00000009567	TRNT1	85	89.157	Erinaceus_europaeus
ENSCHOG00000005712	TRNT1	83	73.096	ENSELUG00000003802	trnt1	84	73.096	Esox_lucius
ENSCHOG00000005712	TRNT1	85	90.964	ENSFCAG00000026805	TRNT1	84	90.964	Felis_catus
ENSCHOG00000005712	TRNT1	73	81.046	ENSFALG00000013539	TRNT1	83	81.046	Ficedula_albicollis
ENSCHOG00000005712	TRNT1	85	91.584	ENSFDAG00000018412	TRNT1	100	90.299	Fukomys_damarensis
ENSCHOG00000005712	TRNT1	81	75.648	ENSFHEG00000019294	trnt1	84	75.648	Fundulus_heteroclitus
ENSCHOG00000005712	TRNT1	78	78.409	ENSGMOG00000007460	trnt1	80	78.409	Gadus_morhua
ENSCHOG00000005712	TRNT1	78	78.161	ENSGALG00000017368	TRNT1	78	78.161	Gallus_gallus
ENSCHOG00000005712	TRNT1	78	79.545	ENSGAFG00000008647	trnt1	80	79.545	Gambusia_affinis
ENSCHOG00000005712	TRNT1	78	79.545	ENSGACG00000011903	trnt1	79	82.237	Gasterosteus_aculeatus
ENSCHOG00000005712	TRNT1	80	84.239	ENSGAGG00000020942	TRNT1	79	84.239	Gopherus_agassizii
ENSCHOG00000005712	TRNT1	85	90.594	ENSGGOG00000015286	TRNT1	85	90.594	Gorilla_gorilla
ENSCHOG00000005712	TRNT1	83	73.846	ENSHBUG00000002797	trnt1	84	73.846	Haplochromis_burtoni
ENSCHOG00000005712	TRNT1	85	89.604	ENSHGLG00000003649	TRNT1	85	89.604	Heterocephalus_glaber_female
ENSCHOG00000005712	TRNT1	85	84.236	ENSHGLG00000000221	-	85	84.236	Heterocephalus_glaber_female
ENSCHOG00000005712	TRNT1	85	89.091	ENSHGLG00100016421	TRNT1	95	84.158	Heterocephalus_glaber_male
ENSCHOG00000005712	TRNT1	78	80.114	ENSHCOG00000010618	trnt1	80	80.114	Hippocampus_comes
ENSCHOG00000005712	TRNT1	81	75.000	ENSIPUG00000000971	trnt1	81	75.000	Ictalurus_punctatus
ENSCHOG00000005712	TRNT1	85	90.099	ENSSTOG00000000150	TRNT1	97	90.050	Ictidomys_tridecemlineatus
ENSCHOG00000005712	TRNT1	85	90.594	ENSJJAG00000018561	Trnt1	84	90.594	Jaculus_jaculus
ENSCHOG00000005712	TRNT1	81	74.227	ENSKMAG00000011307	trnt1	84	74.227	Kryptolebias_marmoratus
ENSCHOG00000005712	TRNT1	79	73.846	ENSLBEG00000019457	trnt1	85	73.846	Labrus_bergylta
ENSCHOG00000005712	TRNT1	80	81.421	ENSLACG00000013227	TRNT1	80	81.421	Latimeria_chalumnae
ENSCHOG00000005712	TRNT1	82	74.211	ENSLOCG00000011105	trnt1	80	74.211	Lepisosteus_oculatus
ENSCHOG00000005712	TRNT1	85	92.574	ENSLAFG00000023191	TRNT1	85	92.574	Loxodonta_africana
ENSCHOG00000005712	TRNT1	85	92.079	ENSMFAG00000045113	TRNT1	84	92.079	Macaca_fascicularis
ENSCHOG00000005712	TRNT1	85	92.079	ENSMMUG00000017983	TRNT1	84	92.079	Macaca_mulatta
ENSCHOG00000005712	TRNT1	85	92.079	ENSMNEG00000037805	TRNT1	84	92.079	Macaca_nemestrina
ENSCHOG00000005712	TRNT1	73	94.079	ENSMLEG00000033671	TRNT1	83	94.079	Mandrillus_leucophaeus
ENSCHOG00000005712	TRNT1	83	75.385	ENSMAMG00000023401	trnt1	84	75.385	Mastacembelus_armatus
ENSCHOG00000005712	TRNT1	83	73.846	ENSMZEG00005009141	trnt1	84	73.846	Maylandia_zebra
ENSCHOG00000005712	TRNT1	59	80.899	ENSMGAG00000009971	TRNT1	79	80.899	Meleagris_gallopavo
ENSCHOG00000005712	TRNT1	85	90.594	ENSMAUG00000020707	Trnt1	85	90.594	Mesocricetus_auratus
ENSCHOG00000005712	TRNT1	85	92.079	ENSMICG00000016615	TRNT1	85	92.079	Microcebus_murinus
ENSCHOG00000005712	TRNT1	85	90.909	ENSMOCG00000004539	Trnt1	85	90.909	Microtus_ochrogaster
ENSCHOG00000005712	TRNT1	83	73.333	ENSMMOG00000010742	trnt1	84	73.333	Mola_mola
ENSCHOG00000005712	TRNT1	85	87.129	ENSMODG00000004368	TRNT1	85	87.129	Monodelphis_domestica
ENSCHOG00000005712	TRNT1	83	73.846	ENSMALG00000008376	trnt1	83	73.846	Monopterus_albus
ENSCHOG00000005712	TRNT1	85	92.169	MGP_CAROLIEiJ_G0028698	Trnt1	100	87.313	Mus_caroli
ENSCHOG00000005712	TRNT1	85	90.964	ENSMUSG00000013736	Trnt1	100	87.313	Mus_musculus
ENSCHOG00000005712	TRNT1	84	91.515	MGP_PahariEiJ_G0022449	Trnt1	98	90.404	Mus_pahari
ENSCHOG00000005712	TRNT1	85	91.566	MGP_SPRETEiJ_G0029726	Trnt1	100	87.313	Mus_spretus
ENSCHOG00000005712	TRNT1	85	91.584	ENSMPUG00000017017	TRNT1	84	91.584	Mustela_putorius_furo
ENSCHOG00000005712	TRNT1	74	86.364	ENSMLUG00000011864	TRNT1	83	86.364	Myotis_lucifugus
ENSCHOG00000005712	TRNT1	85	92.121	ENSNGAG00000000537	Trnt1	92	88.614	Nannospalax_galili
ENSCHOG00000005712	TRNT1	64	73.846	ENSNBRG00000023606	trnt1	80	73.846	Neolamprologus_brichardi
ENSCHOG00000005712	TRNT1	85	91.584	ENSNLEG00000003226	TRNT1	85	91.584	Nomascus_leucogenys
ENSCHOG00000005712	TRNT1	85	85.644	ENSMEUG00000004684	TRNT1	85	85.644	Notamacropus_eugenii
ENSCHOG00000005712	TRNT1	73	78.788	ENSOPRG00000015067	TRNT1	81	78.788	Ochotona_princeps
ENSCHOG00000005712	TRNT1	85	90.099	ENSODEG00000007597	TRNT1	85	90.099	Octodon_degus
ENSCHOG00000005712	TRNT1	84	72.864	ENSONIG00000020273	trnt1	84	72.864	Oreochromis_niloticus
ENSCHOG00000005712	TRNT1	84	75.743	ENSOANG00000007514	TRNT1	85	75.743	Ornithorhynchus_anatinus
ENSCHOG00000005712	TRNT1	85	86.139	ENSOCUG00000008580	TRNT1	84	86.139	Oryctolagus_cuniculus
ENSCHOG00000005712	TRNT1	82	74.479	ENSORLG00000003165	trnt1	84	74.479	Oryzias_latipes
ENSCHOG00000005712	TRNT1	82	74.479	ENSORLG00020022060	trnt1	84	74.479	Oryzias_latipes_hni
ENSCHOG00000005712	TRNT1	81	72.680	ENSORLG00015018915	trnt1	84	72.680	Oryzias_latipes_hsok
ENSCHOG00000005712	TRNT1	80	78.022	ENSOMEG00000003331	trnt1	82	78.022	Oryzias_melastigma
ENSCHOG00000005712	TRNT1	85	89.604	ENSOARG00000008631	TRNT1	84	89.604	Ovis_aries
ENSCHOG00000005712	TRNT1	85	91.089	ENSPPAG00000043566	TRNT1	85	91.089	Pan_paniscus
ENSCHOG00000005712	TRNT1	85	91.584	ENSPPRG00000001327	TRNT1	84	91.584	Panthera_pardus
ENSCHOG00000005712	TRNT1	85	91.089	ENSPTIG00000011448	TRNT1	84	91.089	Panthera_tigris_altaica
ENSCHOG00000005712	TRNT1	85	90.594	ENSPTRG00000014564	TRNT1	85	90.594	Pan_troglodytes
ENSCHOG00000005712	TRNT1	85	91.584	ENSPANG00000025944	TRNT1	84	91.584	Papio_anubis
ENSCHOG00000005712	TRNT1	83	71.717	ENSPKIG00000020015	trnt1	84	71.717	Paramormyrops_kingsleyae
ENSCHOG00000005712	TRNT1	76	82.424	ENSPSIG00000017356	TRNT1	81	88.462	Pelodiscus_sinensis
ENSCHOG00000005712	TRNT1	83	73.846	ENSPMGG00000008888	trnt1	83	73.846	Periophthalmus_magnuspinnatus
ENSCHOG00000005712	TRNT1	85	90.964	ENSPEMG00000019845	Trnt1	85	90.964	Peromyscus_maniculatus_bairdii
ENSCHOG00000005712	TRNT1	85	86.634	ENSPCIG00000030436	TRNT1	85	86.634	Phascolarctos_cinereus
ENSCHOG00000005712	TRNT1	78	78.977	ENSPFOG00000006194	trnt1	80	78.977	Poecilia_formosa
ENSCHOG00000005712	TRNT1	78	78.977	ENSPLAG00000015623	trnt1	83	78.613	Poecilia_latipinna
ENSCHOG00000005712	TRNT1	78	78.977	ENSPMEG00000012216	trnt1	83	78.613	Poecilia_mexicana
ENSCHOG00000005712	TRNT1	79	76.667	ENSPREG00000021470	trnt1	81	76.667	Poecilia_reticulata
ENSCHOG00000005712	TRNT1	85	91.089	ENSPPYG00000013702	TRNT1	85	91.089	Pongo_abelii
ENSCHOG00000005712	TRNT1	73	93.421	ENSPCAG00000001951	TRNT1	83	93.421	Procavia_capensis
ENSCHOG00000005712	TRNT1	85	94.059	ENSPCOG00000022228	TRNT1	85	94.059	Propithecus_coquereli
ENSCHOG00000005712	TRNT1	73	92.105	ENSPVAG00000008784	TRNT1	83	92.105	Pteropus_vampyrus
ENSCHOG00000005712	TRNT1	83	73.846	ENSPNYG00000003120	trnt1	84	73.846	Pundamilia_nyererei
ENSCHOG00000005712	TRNT1	83	73.232	ENSPNAG00000000565	trnt1	84	73.232	Pygocentrus_nattereri
ENSCHOG00000005712	TRNT1	84	90.964	ENSRNOG00000006432	Trnt1	84	90.964	Rattus_norvegicus
ENSCHOG00000005712	TRNT1	85	92.079	ENSRBIG00000042632	TRNT1	84	92.079	Rhinopithecus_bieti
ENSCHOG00000005712	TRNT1	85	91.584	ENSRROG00000036866	TRNT1	85	91.584	Rhinopithecus_roxellana
ENSCHOG00000005712	TRNT1	85	91.584	ENSSBOG00000021208	TRNT1	85	91.584	Saimiri_boliviensis_boliviensis
ENSCHOG00000005712	TRNT1	85	84.653	ENSSHAG00000018861	TRNT1	85	84.653	Sarcophilus_harrisii
ENSCHOG00000005712	TRNT1	82	70.854	ENSSFOG00015020844	trnt1	84	70.854	Scleropages_formosus
ENSCHOG00000005712	TRNT1	83	74.359	ENSSMAG00000015432	trnt1	82	74.359	Scophthalmus_maximus
ENSCHOG00000005712	TRNT1	83	73.846	ENSSDUG00000012320	trnt1	84	73.846	Seriola_dumerili
ENSCHOG00000005712	TRNT1	83	73.846	ENSSLDG00000009325	trnt1	84	73.846	Seriola_lalandi_dorsalis
ENSCHOG00000005712	TRNT1	73	85.526	ENSSPUG00000014153	TRNT1	83	85.526	Sphenodon_punctatus
ENSCHOG00000005712	TRNT1	83	74.872	ENSSPAG00000021005	trnt1	84	74.872	Stegastes_partitus
ENSCHOG00000005712	TRNT1	85	90.594	ENSSSCG00000011529	TRNT1	85	90.594	Sus_scrofa
ENSCHOG00000005712	TRNT1	78	78.161	ENSTGUG00000010192	TRNT1	83	78.161	Taeniopygia_guttata
ENSCHOG00000005712	TRNT1	83	74.359	ENSTRUG00000001088	trnt1	84	74.359	Takifugu_rubripes
ENSCHOG00000005712	TRNT1	83	74.242	ENSTNIG00000007363	trnt1	83	74.242	Tetraodon_nigroviridis
ENSCHOG00000005712	TRNT1	85	90.099	ENSTTRG00000007803	TRNT1	85	90.099	Tursiops_truncatus
ENSCHOG00000005712	TRNT1	85	92.079	ENSUAMG00000022574	TRNT1	84	92.079	Ursus_americanus
ENSCHOG00000005712	TRNT1	85	92.079	ENSUMAG00000024092	TRNT1	84	92.079	Ursus_maritimus
ENSCHOG00000005712	TRNT1	85	89.759	ENSVVUG00000012810	TRNT1	84	89.759	Vulpes_vulpes
ENSCHOG00000005712	TRNT1	80	70.588	ENSXETG00000025091	trnt1	83	73.410	Xenopus_tropicalis
ENSCHOG00000005712	TRNT1	78	78.977	ENSXCOG00000010150	trnt1	80	78.977	Xiphophorus_couchianus
ENSCHOG00000005712	TRNT1	78	78.409	ENSXMAG00000002227	trnt1	80	78.409	Xiphophorus_maculatus