EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000005856 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 4951 bases
Position: chrGeneScaffold_2901:381-5331
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000005183	Ribonuc_P_40	PF08584.11	1.2e-60	1	2
ENSCHOP00000005183	Ribonuc_P_40	PF08584.11	1.2e-60	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000005872	-	753	-	ENSCHOP00000005183	250 (aa)	-	UPI0001F9F0B2

Gene Model

Click here to download ENSCHOG00000005856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000005856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000005856	-	100	69.600	ENSG00000124787	RPP40	83	69.600	Homo_sapiens
ENSCHOG00000005856	-	100	70.800	ENSAMEG00000012938	RPP40	69	70.800	Ailuropoda_melanoleuca
ENSCHOG00000005856	-	76	44.167	ENSAOCG00000011846	rpp40	55	44.167	Amphiprion_ocellaris
ENSCHOG00000005856	-	76	44.167	ENSAPEG00000001322	rpp40	55	44.167	Amphiprion_percula
ENSCHOG00000005856	-	76	39.437	ENSATEG00000006584	rpp40	55	41.803	Anabas_testudineus
ENSCHOG00000005856	-	100	54.000	ENSAPLG00000005691	RPP40	83	54.000	Anas_platyrhynchos
ENSCHOG00000005856	-	99	53.012	ENSACAG00000006550	RPP40	61	53.012	Anolis_carolinensis
ENSCHOG00000005856	-	99	67.470	ENSANAG00000029246	RPP40	73	67.470	Aotus_nancymaae
ENSCHOG00000005856	-	74	45.614	ENSACLG00000015883	rpp40	52	45.614	Astatotilapia_calliptera
ENSCHOG00000005856	-	75	61.194	ENSAMXG00000001755	rpp40	52	61.194	Astyanax_mexicanus
ENSCHOG00000005856	-	100	66.400	ENSBTAG00000003332	RPP40	69	66.400	Bos_taurus
ENSCHOG00000005856	-	99	68.273	ENSCJAG00000021373	RPP40	73	68.273	Callithrix_jacchus
ENSCHOG00000005856	-	100	69.200	ENSCAFG00000009435	RPP40	69	69.200	Canis_familiaris
ENSCHOG00000005856	-	100	69.200	ENSCAFG00020013380	RPP40	69	69.200	Canis_lupus_dingo
ENSCHOG00000005856	-	100	66.800	ENSCHIG00000016849	RPP40	82	66.800	Capra_hircus
ENSCHOG00000005856	-	100	70.000	ENSTSYG00000032857	RPP40	83	70.000	Carlito_syrichta
ENSCHOG00000005856	-	99	59.677	ENSCAPG00000004957	RPP40	75	59.677	Cavia_aperea
ENSCHOG00000005856	-	100	66.800	ENSCPOG00000005855	RPP40	74	66.800	Cavia_porcellus
ENSCHOG00000005856	-	99	68.675	ENSCCAG00000019809	RPP40	73	68.675	Cebus_capucinus
ENSCHOG00000005856	-	100	68.400	ENSCATG00000038787	RPP40	74	68.400	Cercocebus_atys
ENSCHOG00000005856	-	100	66.400	ENSCLAG00000003235	RPP40	74	66.400	Chinchilla_lanigera
ENSCHOG00000005856	-	100	69.200	ENSCSAG00000007307	RPP40	69	69.200	Chlorocebus_sabaeus
ENSCHOG00000005856	-	100	56.400	ENSCPBG00000009003	RPP40	69	56.400	Chrysemys_picta_bellii
ENSCHOG00000005856	-	100	69.200	ENSCANG00000033965	RPP40	74	69.200	Colobus_angolensis_palliatus
ENSCHOG00000005856	-	100	64.000	ENSCGRG00001018328	Rpp40	73	64.000	Cricetulus_griseus_chok1gshd
ENSCHOG00000005856	-	100	64.000	ENSCGRG00000011344	Rpp40	69	64.000	Cricetulus_griseus_crigri
ENSCHOG00000005856	-	100	42.400	ENSDARG00000017605	rpp40	69	42.400	Danio_rerio
ENSCHOG00000005856	-	74	63.587	ENSDNOG00000048136	RPP40	62	63.587	Dasypus_novemcinctus
ENSCHOG00000005856	-	100	65.600	ENSDORG00000029944	-	69	65.600	Dipodomys_ordii
ENSCHOG00000005856	-	72	80.282	ENSDORG00000011196	-	56	80.282	Dipodomys_ordii
ENSCHOG00000005856	-	96	34.855	ENSEBUG00000000386	rpp40	76	35.628	Eptatretus_burgeri
ENSCHOG00000005856	-	100	72.000	ENSEASG00005012116	RPP40	55	72.000	Equus_asinus_asinus
ENSCHOG00000005856	-	100	72.000	ENSECAG00000017247	RPP40	55	72.000	Equus_caballus
ENSCHOG00000005856	-	74	60.326	ENSEEUG00000012087	RPP40	62	60.326	Erinaceus_europaeus
ENSCHOG00000005856	-	100	42.800	ENSELUG00000017004	rpp40	69	42.800	Esox_lucius
ENSCHOG00000005856	-	100	70.400	ENSFCAG00000009249	RPP40	54	91.667	Felis_catus
ENSCHOG00000005856	-	77	76.667	ENSFALG00000013166	RPP40	59	76.667	Ficedula_albicollis
ENSCHOG00000005856	-	72	73.973	ENSFDAG00000000265	-	66	73.973	Fukomys_damarensis
ENSCHOG00000005856	-	100	69.200	ENSFDAG00000013001	-	69	69.200	Fukomys_damarensis
ENSCHOG00000005856	-	100	54.400	ENSGALG00000036074	RPP40	73	54.400	Gallus_gallus
ENSCHOG00000005856	-	76	40.833	ENSGACG00000002472	rpp40	70	40.833	Gasterosteus_aculeatus
ENSCHOG00000005856	-	100	57.200	ENSGAGG00000012918	RPP40	69	57.200	Gopherus_agassizii
ENSCHOG00000005856	-	100	69.200	ENSGGOG00000013764	RPP40	74	69.200	Gorilla_gorilla
ENSCHOG00000005856	-	70	47.619	ENSHBUG00000009378	rpp40	53	47.619	Haplochromis_burtoni
ENSCHOG00000005856	-	100	66.000	ENSHGLG00000004871	RPP40	74	66.000	Heterocephalus_glaber_female
ENSCHOG00000005856	-	100	66.000	ENSHGLG00100002080	RPP40	74	66.000	Heterocephalus_glaber_male
ENSCHOG00000005856	-	77	58.333	ENSIPUG00000008951	RPP40	54	58.333	Ictalurus_punctatus
ENSCHOG00000005856	-	100	67.200	ENSSTOG00000011199	RPP40	69	67.200	Ictidomys_tridecemlineatus
ENSCHOG00000005856	-	100	64.000	ENSJJAG00000020629	Rpp40	73	64.000	Jaculus_jaculus
ENSCHOG00000005856	-	76	39.437	ENSKMAG00000019358	rpp40	55	39.437	Kryptolebias_marmoratus
ENSCHOG00000005856	-	75	44.167	ENSLBEG00000022724	rpp40	53	44.167	Labrus_bergylta
ENSCHOG00000005856	-	100	48.800	ENSLACG00000014848	RPP40	69	48.800	Latimeria_chalumnae
ENSCHOG00000005856	-	100	46.400	ENSLOCG00000011650	rpp40	69	46.400	Lepisosteus_oculatus
ENSCHOG00000005856	-	100	68.400	ENSLAFG00000007530	RPP40	89	68.400	Loxodonta_africana
ENSCHOG00000005856	-	100	69.200	ENSMFAG00000043100	RPP40	74	69.200	Macaca_fascicularis
ENSCHOG00000005856	-	100	68.800	ENSMMUG00000004966	RPP40	74	68.800	Macaca_mulatta
ENSCHOG00000005856	-	100	69.200	ENSMNEG00000041986	RPP40	83	69.200	Macaca_nemestrina
ENSCHOG00000005856	-	89	64.865	ENSMLEG00000040851	RPP40	74	64.865	Mandrillus_leucophaeus
ENSCHOG00000005856	-	76	40.000	ENSMAMG00000019551	rpp40	54	40.000	Mastacembelus_armatus
ENSCHOG00000005856	-	76	46.667	ENSMZEG00005019475	rpp40	54	46.667	Maylandia_zebra
ENSCHOG00000005856	-	100	55.600	ENSMGAG00000004009	RPP40	69	55.600	Meleagris_gallopavo
ENSCHOG00000005856	-	100	65.600	ENSMAUG00000010268	Rpp40	74	65.600	Mesocricetus_auratus
ENSCHOG00000005856	-	100	70.800	ENSMICG00000003297	RPP40	74	70.800	Microcebus_murinus
ENSCHOG00000005856	-	100	65.600	ENSMOCG00000000305	Rpp40	74	65.600	Microtus_ochrogaster
ENSCHOG00000005856	-	75	40.845	ENSMMOG00000020591	-	61	40.870	Mola_mola
ENSCHOG00000005856	-	100	61.753	ENSMODG00000009826	RPP40	69	61.753	Monodelphis_domestica
ENSCHOG00000005856	-	76	41.667	ENSMALG00000020133	rpp40	63	41.667	Monopterus_albus
ENSCHOG00000005856	-	100	66.400	MGP_CAROLIEiJ_G0018429	Rpp40	78	89.231	Mus_caroli
ENSCHOG00000005856	-	100	65.600	ENSMUSG00000021418	Rpp40	77	89.231	Mus_musculus
ENSCHOG00000005856	-	100	64.400	MGP_PahariEiJ_G0019497	Rpp40	78	89.231	Mus_pahari
ENSCHOG00000005856	-	100	65.600	MGP_SPRETEiJ_G0019309	Rpp40	78	89.231	Mus_spretus
ENSCHOG00000005856	-	100	71.600	ENSMPUG00000000530	RPP40	64	71.600	Mustela_putorius_furo
ENSCHOG00000005856	-	100	70.400	ENSMLUG00000000501	RPP40	69	70.400	Myotis_lucifugus
ENSCHOG00000005856	-	70	87.671	ENSNGAG00000022529	-	56	87.671	Nannospalax_galili
ENSCHOG00000005856	-	100	67.200	ENSNGAG00000023955	-	74	67.200	Nannospalax_galili
ENSCHOG00000005856	-	76	47.500	ENSNBRG00000017465	rpp40	57	47.500	Neolamprologus_brichardi
ENSCHOG00000005856	-	100	68.400	ENSNLEG00000034397	RPP40	74	68.400	Nomascus_leucogenys
ENSCHOG00000005856	-	100	62.400	ENSMEUG00000005300	RPP40	69	62.400	Notamacropus_eugenii
ENSCHOG00000005856	-	100	61.200	ENSODEG00000018153	-	68	61.200	Octodon_degus
ENSCHOG00000005856	-	100	66.400	ENSODEG00000007255	-	69	66.400	Octodon_degus
ENSCHOG00000005856	-	100	66.000	ENSODEG00000006170	-	84	66.000	Octodon_degus
ENSCHOG00000005856	-	76	45.833	ENSONIG00000014016	rpp40	54	45.833	Oreochromis_niloticus
ENSCHOG00000005856	-	100	59.363	ENSOANG00000001200	RPP40	83	59.363	Ornithorhynchus_anatinus
ENSCHOG00000005856	-	99	63.306	ENSOCUG00000000354	RPP40	68	63.306	Oryctolagus_cuniculus
ENSCHOG00000005856	-	76	42.500	ENSORLG00000008242	-	54	42.500	Oryzias_latipes
ENSCHOG00000005856	-	76	42.500	ENSORLG00015000887	-	54	42.500	Oryzias_latipes_hsok
ENSCHOG00000005856	-	76	41.667	ENSOMEG00000002747	rpp40	54	41.667	Oryzias_melastigma
ENSCHOG00000005856	-	100	70.000	ENSOGAG00000006055	RPP40	69	70.000	Otolemur_garnettii
ENSCHOG00000005856	-	100	66.800	ENSOARG00000018783	RPP40	82	66.800	Ovis_aries
ENSCHOG00000005856	-	100	68.800	ENSPPAG00000023703	RPP40	74	68.800	Pan_paniscus
ENSCHOG00000005856	-	100	70.400	ENSPPRG00000005612	RPP40	54	91.667	Panthera_pardus
ENSCHOG00000005856	-	74	92.793	ENSPTIG00000018847	RPP40	55	92.793	Panthera_tigris_altaica
ENSCHOG00000005856	-	100	68.400	ENSPTRG00000017690	RPP40	74	68.400	Pan_troglodytes
ENSCHOG00000005856	-	100	69.200	ENSPANG00000017865	RPP40	74	69.200	Papio_anubis
ENSCHOG00000005856	-	100	42.800	ENSPKIG00000006311	rpp40	69	42.800	Paramormyrops_kingsleyae
ENSCHOG00000005856	-	89	54.955	ENSPSIG00000007854	RPP40	100	54.955	Pelodiscus_sinensis
ENSCHOG00000005856	-	100	67.600	ENSPEMG00000020809	Rpp40	75	67.600	Peromyscus_maniculatus_bairdii
ENSCHOG00000005856	-	76	51.261	ENSPMAG00000008412	rpp40	68	51.261	Petromyzon_marinus
ENSCHOG00000005856	-	100	62.400	ENSPCIG00000010682	RPP40	74	62.400	Phascolarctos_cinereus
ENSCHOG00000005856	-	76	38.571	ENSPFOG00000011460	rpp40	54	38.571	Poecilia_formosa
ENSCHOG00000005856	-	76	38.571	ENSPLAG00000001334	rpp40	54	38.571	Poecilia_latipinna
ENSCHOG00000005856	-	76	39.167	ENSPMEG00000007721	rpp40	54	39.167	Poecilia_mexicana
ENSCHOG00000005856	-	76	38.571	ENSPREG00000009215	rpp40	54	38.571	Poecilia_reticulata
ENSCHOG00000005856	-	100	69.600	ENSPPYG00000016194	RPP40	69	69.600	Pongo_abelii
ENSCHOG00000005856	-	100	70.800	ENSPCOG00000003907	RPP40	74	70.800	Propithecus_coquereli
ENSCHOG00000005856	-	100	71.600	ENSPVAG00000011325	RPP40	69	71.600	Pteropus_vampyrus
ENSCHOG00000005856	-	67	48.980	ENSPNYG00000004432	rpp40	65	46.429	Pundamilia_nyererei
ENSCHOG00000005856	-	100	40.800	ENSPNAG00000019125	rpp40	69	40.800	Pygocentrus_nattereri
ENSCHOG00000005856	-	100	66.000	ENSRNOG00000016226	Rpp40	83	66.000	Rattus_norvegicus
ENSCHOG00000005856	-	100	69.200	ENSRBIG00000035800	RPP40	83	69.200	Rhinopithecus_bieti
ENSCHOG00000005856	-	100	69.200	ENSRROG00000039116	RPP40	74	69.200	Rhinopithecus_roxellana
ENSCHOG00000005856	-	99	68.273	ENSSBOG00000020297	RPP40	73	68.273	Saimiri_boliviensis_boliviensis
ENSCHOG00000005856	-	100	63.200	ENSSHAG00000002102	RPP40	90	63.200	Sarcophilus_harrisii
ENSCHOG00000005856	-	76	42.500	ENSSDUG00000007202	rpp40	57	42.500	Seriola_dumerili
ENSCHOG00000005856	-	76	43.333	ENSSLDG00000017563	rpp40	57	43.333	Seriola_lalandi_dorsalis
ENSCHOG00000005856	-	100	55.200	ENSSPUG00000017487	-	69	55.200	Sphenodon_punctatus
ENSCHOG00000005856	-	100	52.800	ENSSPUG00000018950	-	85	52.800	Sphenodon_punctatus
ENSCHOG00000005856	-	76	43.333	ENSSPAG00000022716	rpp40	54	43.333	Stegastes_partitus
ENSCHOG00000005856	-	100	65.600	ENSSSCG00000000998	RPP40	83	65.600	Sus_scrofa
ENSCHOG00000005856	-	100	54.800	ENSTGUG00000002258	-	70	54.800	Taeniopygia_guttata
ENSCHOG00000005856	-	76	41.667	ENSTRUG00000003755	rpp40	54	41.667	Takifugu_rubripes
ENSCHOG00000005856	-	76	40.000	ENSTNIG00000003077	rpp40	54	40.000	Tetraodon_nigroviridis
ENSCHOG00000005856	-	100	69.600	ENSTTRG00000007319	RPP40	69	69.600	Tursiops_truncatus
ENSCHOG00000005856	-	100	70.400	ENSUAMG00000002159	RPP40	83	70.400	Ursus_americanus
ENSCHOG00000005856	-	100	70.400	ENSUMAG00000018639	RPP40	65	70.400	Ursus_maritimus
ENSCHOG00000005856	-	73	69.780	ENSVPAG00000004652	-	63	69.780	Vicugna_pacos
ENSCHOG00000005856	-	100	68.800	ENSVVUG00000005451	RPP40	69	68.800	Vulpes_vulpes
ENSCHOG00000005856	-	77	66.667	ENSXETG00000017617	rpp40	54	66.667	Xenopus_tropicalis