EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000006008 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 10924 bases
Position: chrGeneScaffold_6035:2715-13638
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000005310	KH_1	PF00013.29	9.4e-08	1	1
ENSCHOP00000005310	zf-CCHC	PF00098.23	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000006023	SF1-201	1590	-	ENSCHOP00000005310	530 (aa)	-	UPI0001F9F2E7

Gene Model

Click here to download ENSCHOG00000006008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000006008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000006008	SF1	66	76.323	ENSAPOG00000012341	sf1	56	71.571	Acanthochromis_polyacanthus
ENSCHOG00000006008	SF1	79	93.541	ENSAMEG00000017828	SF1	64	93.447	Ailuropoda_melanoleuca
ENSCHOG00000006008	SF1	66	78.409	ENSACIG00000016514	sf1	59	73.924	Amphilophus_citrinellus
ENSCHOG00000006008	SF1	66	75.766	ENSAOCG00000010934	sf1	56	71.571	Amphiprion_ocellaris
ENSCHOG00000006008	SF1	66	75.766	ENSAPEG00000009498	sf1	56	71.571	Amphiprion_percula
ENSCHOG00000006008	SF1	78	67.442	ENSATEG00000001894	sf1	57	72.362	Anabas_testudineus
ENSCHOG00000006008	SF1	69	92.935	ENSANAG00000022607	-	75	93.266	Aotus_nancymaae
ENSCHOG00000006008	SF1	79	93.541	ENSANAG00000026664	-	89	92.857	Aotus_nancymaae
ENSCHOG00000006008	SF1	66	78.531	ENSACLG00000007633	sf1	59	74.242	Astatotilapia_calliptera
ENSCHOG00000006008	SF1	79	93.780	ENSBTAG00000001035	SF1	68	93.689	Bos_taurus
ENSCHOG00000006008	SF1	79	93.780	ENSCJAG00000002780	SF1	82	84.058	Callithrix_jacchus
ENSCHOG00000006008	SF1	79	93.780	ENSCAFG00000014239	SF1	65	93.689	Canis_familiaris
ENSCHOG00000006008	SF1	79	93.780	ENSCAFG00020014381	SF1	65	93.780	Canis_lupus_dingo
ENSCHOG00000006008	SF1	79	93.780	ENSCHIG00000025867	SF1	75	93.689	Capra_hircus
ENSCHOG00000006008	SF1	54	92.308	ENSTSYG00000033618	SF1	86	98.333	Carlito_syrichta
ENSCHOG00000006008	SF1	79	93.301	ENSCAPG00000010762	SF1	74	93.204	Cavia_aperea
ENSCHOG00000006008	SF1	79	93.301	ENSCPOG00000012290	SF1	77	93.204	Cavia_porcellus
ENSCHOG00000006008	SF1	79	93.780	ENSCCAG00000037881	SF1	89	93.122	Cebus_capucinus
ENSCHOG00000006008	SF1	78	81.311	ENSCCAG00000023781	-	80	81.311	Cebus_capucinus
ENSCHOG00000006008	SF1	79	93.780	ENSCATG00000011564	SF1	84	92.571	Cercocebus_atys
ENSCHOG00000006008	SF1	79	93.780	ENSCSAG00000007258	SF1	75	93.689	Chlorocebus_sabaeus
ENSCHOG00000006008	SF1	76	82.716	ENSCPBG00000023763	SF1	50	84.062	Chrysemys_picta_bellii
ENSCHOG00000006008	SF1	68	52.989	ENSCING00000005564	-	72	55.249	Ciona_intestinalis
ENSCHOG00000006008	SF1	75	54.433	ENSCSAVG00000009055	-	72	63.667	Ciona_savignyi
ENSCHOG00000006008	SF1	79	93.780	ENSCANG00000042201	SF1	84	92.571	Colobus_angolensis_palliatus
ENSCHOG00000006008	SF1	79	93.062	ENSCGRG00001003677	Sf1	72	92.961	Cricetulus_griseus_chok1gshd
ENSCHOG00000006008	SF1	79	93.062	ENSCGRG00000001708	Sf1	76	92.961	Cricetulus_griseus_crigri
ENSCHOG00000006008	SF1	71	72.798	ENSCSEG00000014375	sf1	54	70.720	Cynoglossus_semilaevis
ENSCHOG00000006008	SF1	66	79.143	ENSCVAG00000001670	sf1	60	74.036	Cyprinodon_variegatus
ENSCHOG00000006008	SF1	78	69.544	ENSDARG00000008188	sf1	66	72.750	Danio_rerio
ENSCHOG00000006008	SF1	79	93.301	ENSDNOG00000001282	SF1	75	93.204	Dasypus_novemcinctus
ENSCHOG00000006008	SF1	79	93.780	ENSDORG00000016334	Sf1	65	93.780	Dipodomys_ordii
ENSCHOG00000006008	SF1	73	83.290	ENSETEG00000012830	SF1	54	81.748	Echinops_telfairi
ENSCHOG00000006008	SF1	79	93.301	ENSEASG00005018272	SF1	75	93.204	Equus_asinus_asinus
ENSCHOG00000006008	SF1	79	93.541	ENSECAG00000024544	SF1	75	93.447	Equus_caballus
ENSCHOG00000006008	SF1	69	99.185	ENSEEUG00000001058	SF1	94	99.185	Erinaceus_europaeus
ENSCHOG00000006008	SF1	66	75.630	ENSELUG00000013225	sf1	51	72.864	Esox_lucius
ENSCHOG00000006008	SF1	79	93.780	ENSFCAG00000012231	SF1	82	84.153	Felis_catus
ENSCHOG00000006008	SF1	79	93.780	ENSFDAG00000009833	SF1	74	93.689	Fukomys_damarensis
ENSCHOG00000006008	SF1	66	76.111	ENSFHEG00000022656	sf1	57	71.712	Fundulus_heteroclitus
ENSCHOG00000006008	SF1	57	81.613	ENSGMOG00000007469	sf1	56	81.613	Gadus_morhua
ENSCHOG00000006008	SF1	66	78.933	ENSGAFG00000019284	sf1	73	75.448	Gambusia_affinis
ENSCHOG00000006008	SF1	67	74.795	ENSGACG00000000826	sf1	63	71.100	Gasterosteus_aculeatus
ENSCHOG00000006008	SF1	76	82.716	ENSGAGG00000021691	SF1	54	84.062	Gopherus_agassizii
ENSCHOG00000006008	SF1	66	77.222	ENSHBUG00000011598	sf1	56	73.383	Haplochromis_burtoni
ENSCHOG00000006008	SF1	79	93.780	ENSHGLG00000009541	SF1	72	93.689	Heterocephalus_glaber_female
ENSCHOG00000006008	SF1	79	93.780	ENSHGLG00100013879	-	76	93.596	Heterocephalus_glaber_male
ENSCHOG00000006008	SF1	75	82.707	ENSHGLG00100008076	-	76	79.634	Heterocephalus_glaber_male
ENSCHOG00000006008	SF1	75	84.262	ENSHGLG00100008255	-	81	83.375	Heterocephalus_glaber_male
ENSCHOG00000006008	SF1	67	75.683	ENSHCOG00000011388	sf1	56	71.357	Hippocampus_comes
ENSCHOG00000006008	SF1	79	87.560	ENSSTOG00000024353	-	74	87.229	Ictidomys_tridecemlineatus
ENSCHOG00000006008	SF1	79	93.780	ENSSTOG00000009790	-	67	93.780	Ictidomys_tridecemlineatus
ENSCHOG00000006008	SF1	79	93.541	ENSJJAG00000011788	Sf1	65	93.541	Jaculus_jaculus
ENSCHOG00000006008	SF1	67	78.237	ENSKMAG00000005854	sf1	59	73.116	Kryptolebias_marmoratus
ENSCHOG00000006008	SF1	77	69.639	ENSLBEG00000019836	sf1	61	72.864	Labrus_bergylta
ENSCHOG00000006008	SF1	74	79.040	ENSLACG00000018493	SF1	70	78.481	Latimeria_chalumnae
ENSCHOG00000006008	SF1	71	75.263	ENSLOCG00000002130	sf1	56	74.160	Lepisosteus_oculatus
ENSCHOG00000006008	SF1	79	93.301	ENSLAFG00000007201	SF1	71	89.070	Loxodonta_africana
ENSCHOG00000006008	SF1	79	93.780	ENSMFAG00000033122	SF1	84	92.571	Macaca_fascicularis
ENSCHOG00000006008	SF1	88	87.742	ENSMMUG00000022606	SF1	94	92.765	Macaca_mulatta
ENSCHOG00000006008	SF1	79	93.780	ENSMNEG00000037901	SF1	84	92.571	Macaca_nemestrina
ENSCHOG00000006008	SF1	79	93.780	ENSMLEG00000040706	SF1	84	92.571	Mandrillus_leucophaeus
ENSCHOG00000006008	SF1	66	76.880	ENSMAMG00000001780	sf1	56	72.613	Mastacembelus_armatus
ENSCHOG00000006008	SF1	66	76.944	ENSMZEG00005009196	sf1	56	73.134	Maylandia_zebra
ENSCHOG00000006008	SF1	79	93.062	ENSMAUG00000014064	Sf1	72	92.961	Mesocricetus_auratus
ENSCHOG00000006008	SF1	79	93.780	ENSMICG00000001202	SF1	89	92.876	Microcebus_murinus
ENSCHOG00000006008	SF1	79	92.823	ENSMOCG00000022038	Sf1	72	92.718	Microtus_ochrogaster
ENSCHOG00000006008	SF1	66	76.705	ENSMMOG00000020474	sf1	57	71.611	Mola_mola
ENSCHOG00000006008	SF1	74	92.051	ENSMODG00000029407	SF1	85	92.051	Monodelphis_domestica
ENSCHOG00000006008	SF1	66	78.286	ENSMALG00000020521	sf1	64	71.930	Monopterus_albus
ENSCHOG00000006008	SF1	79	93.062	MGP_CAROLIEiJ_G0022607	Sf1	99	89.773	Mus_caroli
ENSCHOG00000006008	SF1	79	93.062	ENSMUSG00000024949	Sf1	99	89.773	Mus_musculus
ENSCHOG00000006008	SF1	79	93.062	MGP_PahariEiJ_G0014101	Sf1	99	89.773	Mus_pahari
ENSCHOG00000006008	SF1	79	93.062	MGP_SPRETEiJ_G0023518	Sf1	99	89.773	Mus_spretus
ENSCHOG00000006008	SF1	79	93.541	ENSMPUG00000012684	SF1	65	93.541	Mustela_putorius_furo
ENSCHOG00000006008	SF1	79	93.541	ENSMLUG00000015217	-	65	93.541	Myotis_lucifugus
ENSCHOG00000006008	SF1	79	88.756	ENSMLUG00000029800	-	67	89.203	Myotis_lucifugus
ENSCHOG00000006008	SF1	79	93.541	ENSNGAG00000005550	Sf1	72	93.447	Nannospalax_galili
ENSCHOG00000006008	SF1	66	78.531	ENSNBRG00000017606	sf1	58	74.242	Neolamprologus_brichardi
ENSCHOG00000006008	SF1	79	93.780	ENSNLEG00000005236	-	84	92.571	Nomascus_leucogenys
ENSCHOG00000006008	SF1	79	92.823	ENSMEUG00000013424	SF1	78	92.718	Notamacropus_eugenii
ENSCHOG00000006008	SF1	69	99.457	ENSOPRG00000005008	SF1	74	99.457	Ochotona_princeps
ENSCHOG00000006008	SF1	79	91.148	ENSODEG00000006102	-	65	91.019	Octodon_degus
ENSCHOG00000006008	SF1	66	77.222	ENSONIG00000015728	sf1	56	73.383	Oreochromis_niloticus
ENSCHOG00000006008	SF1	67	86.555	ENSOANG00000002909	SF1	84	86.217	Ornithorhynchus_anatinus
ENSCHOG00000006008	SF1	79	93.541	ENSOCUG00000026486	SF1	65	93.447	Oryctolagus_cuniculus
ENSCHOG00000006008	SF1	68	74.731	ENSORLG00000011853	sf1	56	71.357	Oryzias_latipes
ENSCHOG00000006008	SF1	68	74.731	ENSORLG00020011834	sf1	56	71.357	Oryzias_latipes_hni
ENSCHOG00000006008	SF1	67	74.380	ENSORLG00015012855	sf1	56	71.106	Oryzias_latipes_hsok
ENSCHOG00000006008	SF1	79	66.744	ENSOMEG00000005210	sf1	57	72.362	Oryzias_melastigma
ENSCHOG00000006008	SF1	79	93.780	ENSOGAG00000016196	SF1	65	93.689	Otolemur_garnettii
ENSCHOG00000006008	SF1	79	93.780	ENSOARG00000009166	SF1	72	93.689	Ovis_aries
ENSCHOG00000006008	SF1	79	93.780	ENSPPAG00000002799	-	90	93.122	Pan_paniscus
ENSCHOG00000006008	SF1	79	93.780	ENSPPRG00000013566	SF1	68	93.780	Panthera_pardus
ENSCHOG00000006008	SF1	79	93.780	ENSPTIG00000016141	SF1	74	93.689	Panthera_tigris_altaica
ENSCHOG00000006008	SF1	79	93.780	ENSPTRG00000003846	SF1	91	93.333	Pan_troglodytes
ENSCHOG00000006008	SF1	79	93.780	ENSPANG00000020754	SF1	84	92.571	Papio_anubis
ENSCHOG00000006008	SF1	62	79.580	ENSPKIG00000012116	sf1	86	75.953	Paramormyrops_kingsleyae
ENSCHOG00000006008	SF1	60	87.500	ENSPSIG00000003610	SF1	59	87.829	Pelodiscus_sinensis
ENSCHOG00000006008	SF1	79	93.062	ENSPEMG00000010463	Sf1	72	92.961	Peromyscus_maniculatus_bairdii
ENSCHOG00000006008	SF1	60	66.044	ENSPMAG00000008272	sf1	51	61.017	Petromyzon_marinus
ENSCHOG00000006008	SF1	79	92.584	ENSPCIG00000018173	SF1	67	92.476	Phascolarctos_cinereus
ENSCHOG00000006008	SF1	66	79.714	ENSPFOG00000013683	sf1	63	75.385	Poecilia_formosa
ENSCHOG00000006008	SF1	66	78.273	ENSPLAG00000018076	sf1	58	73.935	Poecilia_latipinna
ENSCHOG00000006008	SF1	66	78.273	ENSPMEG00000005726	sf1	59	74.185	Poecilia_mexicana
ENSCHOG00000006008	SF1	66	77.716	ENSPREG00000004155	sf1	56	73.434	Poecilia_reticulata
ENSCHOG00000006008	SF1	79	93.780	ENSPPYG00000003098	-	78	93.689	Pongo_abelii
ENSCHOG00000006008	SF1	88	87.420	ENSPCAG00000013631	SF1	82	81.917	Procavia_capensis
ENSCHOG00000006008	SF1	79	93.780	ENSPCOG00000027546	SF1	89	92.876	Propithecus_coquereli
ENSCHOG00000006008	SF1	94	83.789	ENSPVAG00000016938	SF1	82	83.640	Pteropus_vampyrus
ENSCHOG00000006008	SF1	66	76.944	ENSPNYG00000004673	sf1	56	73.134	Pundamilia_nyererei
ENSCHOG00000006008	SF1	78	70.370	ENSPNAG00000013072	sf1	57	75.190	Pygocentrus_nattereri
ENSCHOG00000006008	SF1	79	93.062	ENSRNOG00000021085	Sf1	73	99.185	Rattus_norvegicus
ENSCHOG00000006008	SF1	79	93.780	ENSRBIG00000042818	SF1	84	92.571	Rhinopithecus_bieti
ENSCHOG00000006008	SF1	79	93.780	ENSRROG00000045655	SF1	88	92.969	Rhinopithecus_roxellana
ENSCHOG00000006008	SF1	76	80.000	ENSSBOG00000022267	-	95	78.100	Saimiri_boliviensis_boliviensis
ENSCHOG00000006008	SF1	71	86.649	ENSSHAG00000006841	SF1	70	87.958	Sarcophilus_harrisii
ENSCHOG00000006008	SF1	71	75.131	ENSSFOG00015021978	sf1	52	71.899	Scleropages_formosus
ENSCHOG00000006008	SF1	74	71.182	ENSSMAG00000007549	sf1	60	71.605	Scophthalmus_maximus
ENSCHOG00000006008	SF1	66	75.209	ENSSDUG00000003903	sf1	58	71.859	Seriola_dumerili
ENSCHOG00000006008	SF1	66	75.209	ENSSLDG00000013075	sf1	57	71.859	Seriola_lalandi_dorsalis
ENSCHOG00000006008	SF1	73	88.689	ENSSARG00000008180	SF1	75	88.689	Sorex_araneus
ENSCHOG00000006008	SF1	76	79.765	ENSSPUG00000012907	SF1	68	79.462	Sphenodon_punctatus
ENSCHOG00000006008	SF1	66	75.766	ENSSPAG00000019060	sf1	56	71.608	Stegastes_partitus
ENSCHOG00000006008	SF1	79	93.541	ENSSSCG00000013021	SF1	75	93.447	Sus_scrofa
ENSCHOG00000006008	SF1	69	66.223	ENSTNIG00000004820	sf1	74	63.476	Tetraodon_nigroviridis
ENSCHOG00000006008	SF1	73	85.090	ENSTBEG00000013133	SF1	57	85.090	Tupaia_belangeri
ENSCHOG00000006008	SF1	79	87.234	ENSTTRG00000008857	SF1	76	88.107	Tursiops_truncatus
ENSCHOG00000006008	SF1	63	95.482	ENSUAMG00000011977	SF1	63	95.482	Ursus_americanus
ENSCHOG00000006008	SF1	79	93.780	ENSUMAG00000007268	SF1	79	93.689	Ursus_maritimus
ENSCHOG00000006008	SF1	61	98.901	ENSVPAG00000011912	SF1	58	98.795	Vicugna_pacos
ENSCHOG00000006008	SF1	79	93.780	ENSVVUG00000028585	SF1	75	93.689	Vulpes_vulpes
ENSCHOG00000006008	SF1	78	74.820	ENSXETG00000008434	sf1	65	75.765	Xenopus_tropicalis
ENSCHOG00000006008	SF1	66	79.202	ENSXCOG00000003704	sf1	72	75.385	Xiphophorus_couchianus
ENSCHOG00000006008	SF1	66	77.778	ENSXMAG00000007822	sf1	58	74.185	Xiphophorus_maculatus