EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000006477 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 5370 bases
Position: chrGeneScaffold_6322:20015-25384
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000005731	EXOSC1	PF10447.9	7.1e-10	1	1
ENSCHOP00000005731	ECR1_N	PF14382.6	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000006494	EXOSC1-201	558	-	ENSCHOP00000005731	186 (aa)	-	UPI0001F9F24A

Gene Model

Click here to download ENSCHOG00000006477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000006477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000006477	EXOSC1	100	82.888	ENSG00000171311	EXOSC1	96	82.888	Homo_sapiens
ENSCHOG00000006477	EXOSC1	98	67.391	ENSAPOG00000007822	exosc1	95	67.391	Acanthochromis_polyacanthus
ENSCHOG00000006477	EXOSC1	100	84.492	ENSAMEG00000000129	EXOSC1	96	84.492	Ailuropoda_melanoleuca
ENSCHOG00000006477	EXOSC1	97	66.298	ENSACIG00000018956	exosc1	89	66.298	Amphilophus_citrinellus
ENSCHOG00000006477	EXOSC1	98	67.391	ENSAOCG00000010699	exosc1	95	67.391	Amphiprion_ocellaris
ENSCHOG00000006477	EXOSC1	92	57.310	ENSAPEG00000012690	exosc1	92	57.310	Amphiprion_percula
ENSCHOG00000006477	EXOSC1	98	66.848	ENSATEG00000018683	exosc1	95	66.848	Anabas_testudineus
ENSCHOG00000006477	EXOSC1	99	72.973	ENSACAG00000002101	EXOSC1	95	72.973	Anolis_carolinensis
ENSCHOG00000006477	EXOSC1	100	83.957	ENSANAG00000034669	EXOSC1	96	83.957	Aotus_nancymaae
ENSCHOG00000006477	EXOSC1	98	67.391	ENSACLG00000021243	exosc1	95	67.391	Astatotilapia_calliptera
ENSCHOG00000006477	EXOSC1	98	69.022	ENSAMXG00000011116	exosc1	95	69.022	Astyanax_mexicanus
ENSCHOG00000006477	EXOSC1	100	83.957	ENSBTAG00000012699	EXOSC1	96	83.957	Bos_taurus
ENSCHOG00000006477	EXOSC1	100	83.422	ENSCJAG00000016586	EXOSC1	96	83.422	Callithrix_jacchus
ENSCHOG00000006477	EXOSC1	100	84.492	ENSCAFG00000009068	EXOSC1	90	84.492	Canis_familiaris
ENSCHOG00000006477	EXOSC1	100	84.492	ENSCAFG00020006002	EXOSC1	90	84.492	Canis_lupus_dingo
ENSCHOG00000006477	EXOSC1	100	83.957	ENSCHIG00000015253	EXOSC1	96	83.957	Capra_hircus
ENSCHOG00000006477	EXOSC1	100	83.957	ENSTSYG00000000760	EXOSC1	96	83.957	Carlito_syrichta
ENSCHOG00000006477	EXOSC1	100	83.422	ENSCPOG00000001173	EXOSC1	96	83.422	Cavia_porcellus
ENSCHOG00000006477	EXOSC1	100	50.267	ENSCCAG00000023986	EXOSC1	95	50.000	Cebus_capucinus
ENSCHOG00000006477	EXOSC1	100	82.888	ENSCATG00000034114	EXOSC1	96	82.888	Cercocebus_atys
ENSCHOG00000006477	EXOSC1	100	83.957	ENSCLAG00000002463	EXOSC1	96	83.957	Chinchilla_lanigera
ENSCHOG00000006477	EXOSC1	100	82.353	ENSCSAG00000005870	EXOSC1	96	82.353	Chlorocebus_sabaeus
ENSCHOG00000006477	EXOSC1	56	60.577	ENSCPBG00000011949	EXOSC1	86	60.577	Chrysemys_picta_bellii
ENSCHOG00000006477	EXOSC1	96	50.276	ENSCING00000022734	-	87	50.276	Ciona_intestinalis
ENSCHOG00000006477	EXOSC1	96	50.829	ENSCSAVG00000010865	-	92	50.829	Ciona_savignyi
ENSCHOG00000006477	EXOSC1	100	82.888	ENSCANG00000034159	EXOSC1	96	82.888	Colobus_angolensis_palliatus
ENSCHOG00000006477	EXOSC1	100	82.888	ENSCGRG00001000335	Exosc1	96	82.888	Cricetulus_griseus_chok1gshd
ENSCHOG00000006477	EXOSC1	100	82.888	ENSCGRG00000011602	Exosc1	96	82.888	Cricetulus_griseus_crigri
ENSCHOG00000006477	EXOSC1	98	66.848	ENSCSEG00000007895	exosc1	91	66.848	Cynoglossus_semilaevis
ENSCHOG00000006477	EXOSC1	98	64.130	ENSCVAG00000016748	exosc1	95	64.130	Cyprinodon_variegatus
ENSCHOG00000006477	EXOSC1	98	67.935	ENSDARG00000059841	exosc1	95	67.935	Danio_rerio
ENSCHOG00000006477	EXOSC1	78	79.730	ENSDNOG00000007983	EXOSC1	100	79.730	Dasypus_novemcinctus
ENSCHOG00000006477	EXOSC1	100	82.888	ENSDORG00000016528	Exosc1	96	82.888	Dipodomys_ordii
ENSCHOG00000006477	EXOSC1	96	43.243	FBgn0032346	Csl4	90	43.243	Drosophila_melanogaster
ENSCHOG00000006477	EXOSC1	100	83.422	ENSETEG00000002469	-	96	83.422	Echinops_telfairi
ENSCHOG00000006477	EXOSC1	99	55.851	ENSEBUG00000008164	exosc1	94	55.851	Eptatretus_burgeri
ENSCHOG00000006477	EXOSC1	100	85.027	ENSEASG00005008684	EXOSC1	96	85.027	Equus_asinus_asinus
ENSCHOG00000006477	EXOSC1	61	77.193	ENSECAG00000010621	EXOSC1	68	77.193	Equus_caballus
ENSCHOG00000006477	EXOSC1	100	83.957	ENSEEUG00000005647	EXOSC1	96	83.957	Erinaceus_europaeus
ENSCHOG00000006477	EXOSC1	95	67.978	ENSELUG00000017369	exosc1	94	62.703	Esox_lucius
ENSCHOG00000006477	EXOSC1	100	84.492	ENSFCAG00000040563	EXOSC1	95	84.492	Felis_catus
ENSCHOG00000006477	EXOSC1	100	72.193	ENSFALG00000008450	EXOSC1	96	72.193	Ficedula_albicollis
ENSCHOG00000006477	EXOSC1	100	85.027	ENSFDAG00000000846	EXOSC1	96	85.027	Fukomys_damarensis
ENSCHOG00000006477	EXOSC1	98	64.130	ENSFHEG00000009154	exosc1	95	64.130	Fundulus_heteroclitus
ENSCHOG00000006477	EXOSC1	98	67.935	ENSGMOG00000008993	exosc1	95	67.935	Gadus_morhua
ENSCHOG00000006477	EXOSC1	100	71.123	ENSGALG00000039917	EXOSC1	80	87.611	Gallus_gallus
ENSCHOG00000006477	EXOSC1	98	64.674	ENSGAFG00000010265	exosc1	90	64.674	Gambusia_affinis
ENSCHOG00000006477	EXOSC1	98	67.935	ENSGACG00000018936	exosc1	95	67.935	Gasterosteus_aculeatus
ENSCHOG00000006477	EXOSC1	100	72.193	ENSGAGG00000019192	EXOSC1	96	72.193	Gopherus_agassizii
ENSCHOG00000006477	EXOSC1	100	82.353	ENSGGOG00000003099	EXOSC1	95	82.353	Gorilla_gorilla
ENSCHOG00000006477	EXOSC1	98	67.391	ENSHBUG00000017857	exosc1	95	67.391	Haplochromis_burtoni
ENSCHOG00000006477	EXOSC1	100	84.492	ENSHGLG00000016927	EXOSC1	96	84.492	Heterocephalus_glaber_female
ENSCHOG00000006477	EXOSC1	100	84.492	ENSHGLG00100012208	EXOSC1	96	84.492	Heterocephalus_glaber_male
ENSCHOG00000006477	EXOSC1	98	66.848	ENSHCOG00000019882	exosc1	95	66.848	Hippocampus_comes
ENSCHOG00000006477	EXOSC1	98	68.478	ENSIPUG00000007685	exosc1	95	68.478	Ictalurus_punctatus
ENSCHOG00000006477	EXOSC1	100	84.492	ENSSTOG00000006615	EXOSC1	96	84.492	Ictidomys_tridecemlineatus
ENSCHOG00000006477	EXOSC1	61	64.912	ENSSTOG00000029860	-	87	64.912	Ictidomys_tridecemlineatus
ENSCHOG00000006477	EXOSC1	100	83.957	ENSJJAG00000013311	Exosc1	96	83.957	Jaculus_jaculus
ENSCHOG00000006477	EXOSC1	98	66.304	ENSKMAG00000001202	exosc1	78	66.304	Kryptolebias_marmoratus
ENSCHOG00000006477	EXOSC1	98	66.848	ENSLBEG00000011448	exosc1	95	66.848	Labrus_bergylta
ENSCHOG00000006477	EXOSC1	98	52.105	ENSLOCG00000003776	exosc1	94	52.105	Lepisosteus_oculatus
ENSCHOG00000006477	EXOSC1	100	85.027	ENSLAFG00000015983	EXOSC1	96	85.027	Loxodonta_africana
ENSCHOG00000006477	EXOSC1	100	82.888	ENSMFAG00000001493	EXOSC1	96	82.888	Macaca_fascicularis
ENSCHOG00000006477	EXOSC1	100	82.888	ENSMMUG00000020028	EXOSC1	95	82.888	Macaca_mulatta
ENSCHOG00000006477	EXOSC1	100	82.888	ENSMNEG00000029816	EXOSC1	96	82.888	Macaca_nemestrina
ENSCHOG00000006477	EXOSC1	100	78.495	ENSMLEG00000027643	EXOSC1	96	78.495	Mandrillus_leucophaeus
ENSCHOG00000006477	EXOSC1	98	67.935	ENSMAMG00000012200	exosc1	95	67.935	Mastacembelus_armatus
ENSCHOG00000006477	EXOSC1	98	67.391	ENSMZEG00005007042	exosc1	95	67.391	Maylandia_zebra
ENSCHOG00000006477	EXOSC1	100	82.888	ENSMAUG00000020462	-	95	82.888	Mesocricetus_auratus
ENSCHOG00000006477	EXOSC1	100	83.422	ENSMICG00000007664	EXOSC1	95	83.422	Microcebus_murinus
ENSCHOG00000006477	EXOSC1	97	76.374	ENSMOCG00000017124	-	93	76.374	Microtus_ochrogaster
ENSCHOG00000006477	EXOSC1	100	82.888	ENSMOCG00000006004	-	96	82.888	Microtus_ochrogaster
ENSCHOG00000006477	EXOSC1	100	79.255	ENSMODG00000004213	EXOSC1	96	79.255	Monodelphis_domestica
ENSCHOG00000006477	EXOSC1	95	67.232	ENSMALG00000007061	exosc1	89	67.232	Monopterus_albus
ENSCHOG00000006477	EXOSC1	100	82.888	MGP_CAROLIEiJ_G0022959	Exosc1	96	82.888	Mus_caroli
ENSCHOG00000006477	EXOSC1	100	82.353	ENSMUSG00000034321	Exosc1	96	82.353	Mus_musculus
ENSCHOG00000006477	EXOSC1	100	82.888	MGP_PahariEiJ_G0014449	Exosc1	96	82.888	Mus_pahari
ENSCHOG00000006477	EXOSC1	100	82.888	MGP_SPRETEiJ_G0023880	Exosc1	96	82.888	Mus_spretus
ENSCHOG00000006477	EXOSC1	100	84.492	ENSMPUG00000017044	EXOSC1	96	84.492	Mustela_putorius_furo
ENSCHOG00000006477	EXOSC1	100	83.422	ENSMLUG00000009228	EXOSC1	96	83.422	Myotis_lucifugus
ENSCHOG00000006477	EXOSC1	100	82.353	ENSNGAG00000022033	Exosc1	96	82.353	Nannospalax_galili
ENSCHOG00000006477	EXOSC1	100	82.353	ENSNLEG00000013872	EXOSC1	96	82.353	Nomascus_leucogenys
ENSCHOG00000006477	EXOSC1	61	71.053	ENSMEUG00000002246	EXOSC1	99	71.053	Notamacropus_eugenii
ENSCHOG00000006477	EXOSC1	100	82.353	ENSOPRG00000005065	EXOSC1	96	82.353	Ochotona_princeps
ENSCHOG00000006477	EXOSC1	100	84.492	ENSODEG00000016709	EXOSC1	96	84.492	Octodon_degus
ENSCHOG00000006477	EXOSC1	98	67.391	ENSONIG00000017683	exosc1	94	67.391	Oreochromis_niloticus
ENSCHOG00000006477	EXOSC1	57	91.589	ENSOANG00000006563	EXOSC1	90	92.035	Ornithorhynchus_anatinus
ENSCHOG00000006477	EXOSC1	99	79.032	ENSOCUG00000026461	-	95	79.032	Oryctolagus_cuniculus
ENSCHOG00000006477	EXOSC1	100	83.511	ENSOCUG00000011898	-	96	83.511	Oryctolagus_cuniculus
ENSCHOG00000006477	EXOSC1	98	66.486	ENSORLG00000011595	exosc1	95	66.486	Oryzias_latipes
ENSCHOG00000006477	EXOSC1	98	66.486	ENSORLG00020005831	exosc1	95	66.486	Oryzias_latipes_hni
ENSCHOG00000006477	EXOSC1	98	66.486	ENSORLG00015004317	exosc1	95	66.486	Oryzias_latipes_hsok
ENSCHOG00000006477	EXOSC1	98	51.366	ENSOMEG00000013907	exosc1	94	51.366	Oryzias_melastigma
ENSCHOG00000006477	EXOSC1	100	82.888	ENSOGAG00000016259	EXOSC1	96	82.888	Otolemur_garnettii
ENSCHOG00000006477	EXOSC1	100	83.422	ENSOARG00000010136	EXOSC1	96	83.422	Ovis_aries
ENSCHOG00000006477	EXOSC1	100	77.249	ENSPPAG00000039842	EXOSC1	96	77.249	Pan_paniscus
ENSCHOG00000006477	EXOSC1	100	84.492	ENSPPRG00000023366	EXOSC1	96	84.492	Panthera_pardus
ENSCHOG00000006477	EXOSC1	100	84.492	ENSPTIG00000017701	EXOSC1	96	84.492	Panthera_tigris_altaica
ENSCHOG00000006477	EXOSC1	100	82.888	ENSPTRG00000002808	EXOSC1	96	82.888	Pan_troglodytes
ENSCHOG00000006477	EXOSC1	100	82.888	ENSPANG00000021324	EXOSC1	96	82.888	Papio_anubis
ENSCHOG00000006477	EXOSC1	98	68.478	ENSPKIG00000016037	exosc1	95	68.478	Paramormyrops_kingsleyae
ENSCHOG00000006477	EXOSC1	60	79.646	ENSPSIG00000013571	EXOSC1	91	79.646	Pelodiscus_sinensis
ENSCHOG00000006477	EXOSC1	98	66.848	ENSPMGG00000014002	exosc1	94	66.848	Periophthalmus_magnuspinnatus
ENSCHOG00000006477	EXOSC1	100	82.888	ENSPEMG00000010710	-	96	82.888	Peromyscus_maniculatus_bairdii
ENSCHOG00000006477	EXOSC1	95	61.453	ENSPMAG00000000195	exosc1	91	61.453	Petromyzon_marinus
ENSCHOG00000006477	EXOSC1	100	80.749	ENSPCIG00000002210	EXOSC1	95	80.749	Phascolarctos_cinereus
ENSCHOG00000006477	EXOSC1	98	64.130	ENSPFOG00000006755	exosc1	90	64.130	Poecilia_formosa
ENSCHOG00000006477	EXOSC1	98	64.130	ENSPLAG00000005880	exosc1	95	64.130	Poecilia_latipinna
ENSCHOG00000006477	EXOSC1	98	64.130	ENSPMEG00000015598	exosc1	90	64.130	Poecilia_mexicana
ENSCHOG00000006477	EXOSC1	98	64.130	ENSPREG00000000405	exosc1	89	64.130	Poecilia_reticulata
ENSCHOG00000006477	EXOSC1	100	82.353	ENSPPYG00000002531	EXOSC1	96	82.353	Pongo_abelii
ENSCHOG00000006477	EXOSC1	100	83.422	ENSPCAG00000009135	EXOSC1	96	83.422	Procavia_capensis
ENSCHOG00000006477	EXOSC1	100	77.957	ENSPCOG00000027539	EXOSC1	96	77.957	Propithecus_coquereli
ENSCHOG00000006477	EXOSC1	100	83.957	ENSPVAG00000003372	EXOSC1	96	83.957	Pteropus_vampyrus
ENSCHOG00000006477	EXOSC1	98	67.391	ENSPNYG00000021745	exosc1	95	67.391	Pundamilia_nyererei
ENSCHOG00000006477	EXOSC1	98	69.022	ENSPNAG00000001944	exosc1	95	69.022	Pygocentrus_nattereri
ENSCHOG00000006477	EXOSC1	100	82.888	ENSRNOG00000048708	Exosc1	96	82.888	Rattus_norvegicus
ENSCHOG00000006477	EXOSC1	100	82.888	ENSRBIG00000035618	EXOSC1	96	82.888	Rhinopithecus_bieti
ENSCHOG00000006477	EXOSC1	100	82.888	ENSRROG00000032589	EXOSC1	95	82.888	Rhinopithecus_roxellana
ENSCHOG00000006477	EXOSC1	100	83.957	ENSSBOG00000000359	EXOSC1	96	83.957	Saimiri_boliviensis_boliviensis
ENSCHOG00000006477	EXOSC1	60	96.491	ENSSHAG00000018219	EXOSC1	78	96.491	Sarcophilus_harrisii
ENSCHOG00000006477	EXOSC1	98	70.109	ENSSFOG00015009069	exosc1	95	70.109	Scleropages_formosus
ENSCHOG00000006477	EXOSC1	98	66.667	ENSSFOG00015016289	-	94	66.667	Scleropages_formosus
ENSCHOG00000006477	EXOSC1	98	67.935	ENSSMAG00000003721	exosc1	95	67.935	Scophthalmus_maximus
ENSCHOG00000006477	EXOSC1	98	67.935	ENSSDUG00000002993	exosc1	95	67.935	Seriola_dumerili
ENSCHOG00000006477	EXOSC1	98	67.935	ENSSLDG00000025181	exosc1	95	67.935	Seriola_lalandi_dorsalis
ENSCHOG00000006477	EXOSC1	100	95.722	ENSSARG00000000162	EXOSC1	96	95.722	Sorex_araneus
ENSCHOG00000006477	EXOSC1	100	71.658	ENSSPUG00000012263	EXOSC1	96	71.658	Sphenodon_punctatus
ENSCHOG00000006477	EXOSC1	98	59.563	ENSSPAG00000016792	exosc1	78	59.563	Stegastes_partitus
ENSCHOG00000006477	EXOSC1	100	83.957	ENSSSCG00000010518	EXOSC1	87	83.957	Sus_scrofa
ENSCHOG00000006477	EXOSC1	98	70.652	ENSTGUG00000009692	EXOSC1	95	70.652	Taeniopygia_guttata
ENSCHOG00000006477	EXOSC1	97	62.637	ENSTRUG00000007706	exosc1	94	62.637	Takifugu_rubripes
ENSCHOG00000006477	EXOSC1	97	62.162	ENSTNIG00000014079	exosc1	93	62.162	Tetraodon_nigroviridis
ENSCHOG00000006477	EXOSC1	100	85.484	ENSTBEG00000006011	EXOSC1	96	85.484	Tupaia_belangeri
ENSCHOG00000006477	EXOSC1	94	83.523	ENSTTRG00000009887	EXOSC1	96	83.523	Tursiops_truncatus
ENSCHOG00000006477	EXOSC1	100	68.817	ENSUAMG00000010266	EXOSC1	96	68.817	Ursus_americanus
ENSCHOG00000006477	EXOSC1	100	68.817	ENSUMAG00000022002	EXOSC1	96	68.817	Ursus_maritimus
ENSCHOG00000006477	EXOSC1	100	84.492	ENSVVUG00000023192	EXOSC1	61	84.492	Vulpes_vulpes
ENSCHOG00000006477	EXOSC1	98	67.391	ENSXETG00000003434	exosc1	95	67.391	Xenopus_tropicalis
ENSCHOG00000006477	EXOSC1	60	84.071	ENSXCOG00000014499	exosc1	87	84.071	Xiphophorus_couchianus
ENSCHOG00000006477	EXOSC1	98	64.674	ENSXMAG00000023382	exosc1	89	64.674	Xiphophorus_maculatus