EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000006601 (Gene tree)
Gene ID: -
Gene Symbol: POLR1C
Alias: RPA39|RPA40|RPA5|RPAC1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 1116 bases
Position: chrGeneScaffold_6329:28-1143
Accession: 20194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000005842	RNA_pol_A_bac	PF01000.26	1.5e-16	1	1
ENSCHOP00000005842	RNA_pol_L	PF01193.24	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000006616	POLR1C-201	639	-	ENSCHOP00000005842	212 (aa)	-	UPI0001F9FACB

Gene Model

Click here to download ENSCHOG00000006601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000006601's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000006601	POLR1C	100	96.226	ENSG00000171453	POLR1C	73	96.226	Homo_sapiens
ENSCHOG00000006601	POLR1C	100	70.755	ENSAPOG00000024356	polr1c	60	70.755	Acanthochromis_polyacanthus
ENSCHOG00000006601	POLR1C	100	95.283	ENSAMEG00000012205	POLR1C	61	95.283	Ailuropoda_melanoleuca
ENSCHOG00000006601	POLR1C	100	70.283	ENSACIG00000016268	polr1c	65	70.283	Amphilophus_citrinellus
ENSCHOG00000006601	POLR1C	100	68.396	ENSAOCG00000011687	polr1c	59	68.396	Amphiprion_ocellaris
ENSCHOG00000006601	POLR1C	100	68.396	ENSAPEG00000002433	polr1c	60	68.396	Amphiprion_percula
ENSCHOG00000006601	POLR1C	99	70.476	ENSATEG00000005985	polr1c	60	70.476	Anabas_testudineus
ENSCHOG00000006601	POLR1C	100	80.189	ENSAPLG00000002908	POLR1C	71	80.189	Anas_platyrhynchos
ENSCHOG00000006601	POLR1C	100	94.811	ENSANAG00000025805	POLR1C	61	94.811	Aotus_nancymaae
ENSCHOG00000006601	POLR1C	100	68.868	ENSACLG00000006573	polr1c	60	68.868	Astatotilapia_calliptera
ENSCHOG00000006601	POLR1C	100	68.396	ENSAMXG00000012062	polr1c	61	68.396	Astyanax_mexicanus
ENSCHOG00000006601	POLR1C	100	94.811	ENSBTAG00000018969	POLR1C	61	94.811	Bos_taurus
ENSCHOG00000006601	POLR1C	98	50.962	WBGene00019275	rpac-40	57	50.962	Caenorhabditis_elegans
ENSCHOG00000006601	POLR1C	100	94.811	ENSCJAG00000005594	POLR1C	61	94.811	Callithrix_jacchus
ENSCHOG00000006601	POLR1C	100	95.755	ENSCAFG00000001872	POLR1C	61	95.755	Canis_familiaris
ENSCHOG00000006601	POLR1C	100	95.755	ENSCAFG00020012018	POLR1C	61	95.755	Canis_lupus_dingo
ENSCHOG00000006601	POLR1C	100	95.283	ENSCHIG00000004352	POLR1C	61	95.283	Capra_hircus
ENSCHOG00000006601	POLR1C	100	96.698	ENSTSYG00000011921	POLR1C	61	96.698	Carlito_syrichta
ENSCHOG00000006601	POLR1C	100	94.811	ENSCAPG00000015364	POLR1C	62	94.811	Cavia_aperea
ENSCHOG00000006601	POLR1C	100	95.283	ENSCPOG00000038098	POLR1C	61	95.283	Cavia_porcellus
ENSCHOG00000006601	POLR1C	100	95.283	ENSCCAG00000020169	POLR1C	61	95.283	Cebus_capucinus
ENSCHOG00000006601	POLR1C	100	95.755	ENSCATG00000044045	POLR1C	61	95.755	Cercocebus_atys
ENSCHOG00000006601	POLR1C	100	95.283	ENSCLAG00000009266	POLR1C	61	95.283	Chinchilla_lanigera
ENSCHOG00000006601	POLR1C	100	95.283	ENSCSAG00000011913	POLR1C	61	95.283	Chlorocebus_sabaeus
ENSCHOG00000006601	POLR1C	100	81.132	ENSCPBG00000025203	POLR1C	61	81.132	Chrysemys_picta_bellii
ENSCHOG00000006601	POLR1C	99	52.358	ENSCING00000003563	-	61	52.358	Ciona_intestinalis
ENSCHOG00000006601	POLR1C	100	94.811	ENSCANG00000043167	POLR1C	61	94.811	Colobus_angolensis_palliatus
ENSCHOG00000006601	POLR1C	100	92.453	ENSCGRG00001017533	Polr1c	61	92.453	Cricetulus_griseus_chok1gshd
ENSCHOG00000006601	POLR1C	100	92.453	ENSCGRG00000013225	Polr1c	71	92.453	Cricetulus_griseus_crigri
ENSCHOG00000006601	POLR1C	100	68.396	ENSCSEG00000018097	polr1c	61	68.396	Cynoglossus_semilaevis
ENSCHOG00000006601	POLR1C	100	68.868	ENSCVAG00000005684	polr1c	85	68.868	Cyprinodon_variegatus
ENSCHOG00000006601	POLR1C	100	68.868	ENSDARG00000039400	polr1c	59	68.868	Danio_rerio
ENSCHOG00000006601	POLR1C	100	96.226	ENSDNOG00000042693	POLR1C	61	96.226	Dasypus_novemcinctus
ENSCHOG00000006601	POLR1C	100	94.340	ENSDORG00000000429	Polr1c	61	94.340	Dipodomys_ordii
ENSCHOG00000006601	POLR1C	98	54.106	FBgn0031657	CG3756	61	54.106	Drosophila_melanogaster
ENSCHOG00000006601	POLR1C	100	90.094	ENSETEG00000010807	POLR1C	61	90.094	Echinops_telfairi
ENSCHOG00000006601	POLR1C	98	72.115	ENSEBUG00000013725	polr1c	64	72.115	Eptatretus_burgeri
ENSCHOG00000006601	POLR1C	100	94.811	ENSEASG00005003338	POLR1C	61	94.811	Equus_asinus_asinus
ENSCHOG00000006601	POLR1C	100	94.811	ENSECAG00000023516	POLR1C	60	94.811	Equus_caballus
ENSCHOG00000006601	POLR1C	100	95.283	ENSEEUG00000005471	POLR1C	61	95.283	Erinaceus_europaeus
ENSCHOG00000006601	POLR1C	100	68.396	ENSELUG00000013027	polr1c	61	68.396	Esox_lucius
ENSCHOG00000006601	POLR1C	100	96.226	ENSFCAG00000009735	POLR1C	61	96.226	Felis_catus
ENSCHOG00000006601	POLR1C	100	79.717	ENSFALG00000012111	POLR1C	66	79.717	Ficedula_albicollis
ENSCHOG00000006601	POLR1C	100	93.396	ENSFDAG00000008428	POLR1C	61	93.396	Fukomys_damarensis
ENSCHOG00000006601	POLR1C	100	50.472	ENSFHEG00000000262	polr1c	55	50.943	Fundulus_heteroclitus
ENSCHOG00000006601	POLR1C	100	66.667	ENSGMOG00000013878	polr1c	66	66.667	Gadus_morhua
ENSCHOG00000006601	POLR1C	100	80.189	ENSGALG00000010349	POLR1C	61	80.189	Gallus_gallus
ENSCHOG00000006601	POLR1C	100	67.925	ENSGAFG00000010153	polr1c	60	67.925	Gambusia_affinis
ENSCHOG00000006601	POLR1C	100	68.396	ENSGACG00000002453	polr1c	60	68.396	Gasterosteus_aculeatus
ENSCHOG00000006601	POLR1C	100	81.604	ENSGAGG00000010640	POLR1C	66	81.604	Gopherus_agassizii
ENSCHOG00000006601	POLR1C	100	96.226	ENSGGOG00000010903	POLR1C	61	96.226	Gorilla_gorilla
ENSCHOG00000006601	POLR1C	100	68.868	ENSHBUG00000017816	polr1c	65	68.868	Haplochromis_burtoni
ENSCHOG00000006601	POLR1C	100	92.925	ENSHGLG00000019441	POLR1C	82	92.925	Heterocephalus_glaber_female
ENSCHOG00000006601	POLR1C	100	92.453	ENSHGLG00100005970	POLR1C	82	92.453	Heterocephalus_glaber_male
ENSCHOG00000006601	POLR1C	98	67.308	ENSHCOG00000002179	polr1c	59	67.308	Hippocampus_comes
ENSCHOG00000006601	POLR1C	99	68.095	ENSIPUG00000024464	polr1c	60	68.095	Ictalurus_punctatus
ENSCHOG00000006601	POLR1C	100	96.698	ENSSTOG00000010631	POLR1C	61	96.698	Ictidomys_tridecemlineatus
ENSCHOG00000006601	POLR1C	100	92.453	ENSJJAG00000023110	Polr1c	61	92.453	Jaculus_jaculus
ENSCHOG00000006601	POLR1C	100	68.868	ENSKMAG00000014305	polr1c	59	68.868	Kryptolebias_marmoratus
ENSCHOG00000006601	POLR1C	100	67.925	ENSLBEG00000014925	polr1c	60	67.925	Labrus_bergylta
ENSCHOG00000006601	POLR1C	100	62.441	ENSLACG00000012567	POLR1C	62	62.441	Latimeria_chalumnae
ENSCHOG00000006601	POLR1C	100	70.283	ENSLOCG00000016710	polr1c	58	70.283	Lepisosteus_oculatus
ENSCHOG00000006601	POLR1C	100	96.698	ENSLAFG00000026248	POLR1C	70	96.698	Loxodonta_africana
ENSCHOG00000006601	POLR1C	100	95.283	ENSMFAG00000046295	POLR1C	61	95.283	Macaca_fascicularis
ENSCHOG00000006601	POLR1C	100	95.283	ENSMMUG00000015192	POLR1C	61	95.283	Macaca_mulatta
ENSCHOG00000006601	POLR1C	100	95.283	ENSMNEG00000028073	POLR1C	61	95.283	Macaca_nemestrina
ENSCHOG00000006601	POLR1C	100	95.755	ENSMLEG00000034818	POLR1C	61	95.755	Mandrillus_leucophaeus
ENSCHOG00000006601	POLR1C	100	68.396	ENSMAMG00000008700	polr1c	60	68.396	Mastacembelus_armatus
ENSCHOG00000006601	POLR1C	100	68.868	ENSMZEG00005018545	polr1c	60	68.868	Maylandia_zebra
ENSCHOG00000006601	POLR1C	100	79.717	ENSMGAG00000011020	POLR1C	74	79.717	Meleagris_gallopavo
ENSCHOG00000006601	POLR1C	100	93.396	ENSMAUG00000014329	Polr1c	61	93.396	Mesocricetus_auratus
ENSCHOG00000006601	POLR1C	100	93.396	ENSMICG00000005027	POLR1C	61	93.396	Microcebus_murinus
ENSCHOG00000006601	POLR1C	100	92.925	ENSMOCG00000017549	Polr1c	61	92.925	Microtus_ochrogaster
ENSCHOG00000006601	POLR1C	99	48.341	ENSMMOG00000005380	polr1c	54	48.815	Mola_mola
ENSCHOG00000006601	POLR1C	100	88.208	ENSMODG00000018964	POLR1C	73	88.208	Monodelphis_domestica
ENSCHOG00000006601	POLR1C	100	50.472	ENSMALG00000011711	polr1c	55	50.943	Monopterus_albus
ENSCHOG00000006601	POLR1C	100	92.925	MGP_CAROLIEiJ_G0021662	Polr1c	82	92.925	Mus_caroli
ENSCHOG00000006601	POLR1C	100	92.925	ENSMUSG00000067148	Polr1c	82	92.925	Mus_musculus
ENSCHOG00000006601	POLR1C	100	92.453	MGP_PahariEiJ_G0020654	Polr1c	82	92.453	Mus_pahari
ENSCHOG00000006601	POLR1C	100	93.396	MGP_SPRETEiJ_G0022574	Polr1c	82	93.396	Mus_spretus
ENSCHOG00000006601	POLR1C	100	96.226	ENSMPUG00000012916	POLR1C	56	96.226	Mustela_putorius_furo
ENSCHOG00000006601	POLR1C	100	97.642	ENSMLUG00000017751	POLR1C	61	97.642	Myotis_lucifugus
ENSCHOG00000006601	POLR1C	100	93.396	ENSNGAG00000023487	Polr1c	73	93.396	Nannospalax_galili
ENSCHOG00000006601	POLR1C	100	69.340	ENSNBRG00000018742	polr1c	60	69.340	Neolamprologus_brichardi
ENSCHOG00000006601	POLR1C	100	96.226	ENSNLEG00000004035	POLR1C	61	96.226	Nomascus_leucogenys
ENSCHOG00000006601	POLR1C	100	66.981	ENSMEUG00000006778	POLR1C	61	66.981	Notamacropus_eugenii
ENSCHOG00000006601	POLR1C	63	90.299	ENSOPRG00000000145	POLR1C	50	90.299	Ochotona_princeps
ENSCHOG00000006601	POLR1C	100	91.981	ENSODEG00000017109	-	97	91.981	Octodon_degus
ENSCHOG00000006601	POLR1C	100	92.925	ENSODEG00000015831	-	61	92.925	Octodon_degus
ENSCHOG00000006601	POLR1C	100	69.340	ENSONIG00000013133	polr1c	59	69.340	Oreochromis_niloticus
ENSCHOG00000006601	POLR1C	100	83.491	ENSOANG00000003043	POLR1C	61	83.491	Ornithorhynchus_anatinus
ENSCHOG00000006601	POLR1C	100	96.226	ENSOCUG00000005504	POLR1C	61	96.226	Oryctolagus_cuniculus
ENSCHOG00000006601	POLR1C	98	66.346	ENSORLG00000019743	polr1c	61	66.346	Oryzias_latipes
ENSCHOG00000006601	POLR1C	98	66.827	ENSORLG00020006489	POLR1C	62	66.827	Oryzias_latipes_hni
ENSCHOG00000006601	POLR1C	92	57.436	ENSORLG00020005555	polr1c	57	57.436	Oryzias_latipes_hni
ENSCHOG00000006601	POLR1C	98	65.865	ENSORLG00015013322	polr1c	59	65.865	Oryzias_latipes_hsok
ENSCHOG00000006601	POLR1C	97	68.932	ENSOMEG00000016527	polr1c	59	68.932	Oryzias_melastigma
ENSCHOG00000006601	POLR1C	100	92.925	ENSOGAG00000016318	POLR1C	61	92.925	Otolemur_garnettii
ENSCHOG00000006601	POLR1C	100	95.283	ENSOARG00000007503	POLR1C	61	95.283	Ovis_aries
ENSCHOG00000006601	POLR1C	100	96.226	ENSPPAG00000043678	POLR1C	61	96.226	Pan_paniscus
ENSCHOG00000006601	POLR1C	100	96.226	ENSPPRG00000009760	POLR1C	61	96.226	Panthera_pardus
ENSCHOG00000006601	POLR1C	100	96.226	ENSPTIG00000014813	POLR1C	61	96.226	Panthera_tigris_altaica
ENSCHOG00000006601	POLR1C	100	96.226	ENSPTRG00000018202	POLR1C	61	96.226	Pan_troglodytes
ENSCHOG00000006601	POLR1C	100	95.755	ENSPANG00000009025	POLR1C	61	95.755	Papio_anubis
ENSCHOG00000006601	POLR1C	100	71.698	ENSPKIG00000009858	polr1c	61	71.698	Paramormyrops_kingsleyae
ENSCHOG00000006601	POLR1C	100	79.717	ENSPSIG00000012580	POLR1C	58	79.717	Pelodiscus_sinensis
ENSCHOG00000006601	POLR1C	100	50.943	ENSPMGG00000012121	polr1c	55	51.415	Periophthalmus_magnuspinnatus
ENSCHOG00000006601	POLR1C	100	93.396	ENSPEMG00000006970	Polr1c	61	93.396	Peromyscus_maniculatus_bairdii
ENSCHOG00000006601	POLR1C	100	68.372	ENSPMAG00000005560	polr1c	61	68.372	Petromyzon_marinus
ENSCHOG00000006601	POLR1C	100	88.208	ENSPCIG00000028137	POLR1C	60	88.208	Phascolarctos_cinereus
ENSCHOG00000006601	POLR1C	100	68.868	ENSPFOG00000014342	POLR1C	60	68.868	Poecilia_formosa
ENSCHOG00000006601	POLR1C	100	68.868	ENSPFOG00000014357	polr1c	59	68.868	Poecilia_formosa
ENSCHOG00000006601	POLR1C	100	68.868	ENSPLAG00000004111	polr1c	88	68.868	Poecilia_latipinna
ENSCHOG00000006601	POLR1C	100	68.868	ENSPMEG00000008420	polr1c	60	68.868	Poecilia_mexicana
ENSCHOG00000006601	POLR1C	100	68.868	ENSPMEG00000011877	-	60	68.868	Poecilia_mexicana
ENSCHOG00000006601	POLR1C	100	68.868	ENSPREG00000007985	polr1c	61	68.868	Poecilia_reticulata
ENSCHOG00000006601	POLR1C	100	95.755	ENSPPYG00000016645	POLR1C	62	95.755	Pongo_abelii
ENSCHOG00000006601	POLR1C	100	94.340	ENSPCOG00000024628	POLR1C	61	94.340	Propithecus_coquereli
ENSCHOG00000006601	POLR1C	88	96.774	ENSPVAG00000005689	POLR1C	54	96.774	Pteropus_vampyrus
ENSCHOG00000006601	POLR1C	100	68.868	ENSPNYG00000003620	polr1c	60	68.868	Pundamilia_nyererei
ENSCHOG00000006601	POLR1C	100	68.396	ENSPNAG00000008443	polr1c	66	68.396	Pygocentrus_nattereri
ENSCHOG00000006601	POLR1C	100	92.453	ENSRNOG00000019079	Polr1c	82	92.453	Rattus_norvegicus
ENSCHOG00000006601	POLR1C	100	94.811	ENSRBIG00000007155	POLR1C	61	94.811	Rhinopithecus_bieti
ENSCHOG00000006601	POLR1C	100	95.283	ENSRROG00000000257	POLR1C	61	95.283	Rhinopithecus_roxellana
ENSCHOG00000006601	POLR1C	93	50.505	YPR110C	RPC40	59	50.505	Saccharomyces_cerevisiae
ENSCHOG00000006601	POLR1C	100	95.283	ENSSBOG00000025735	POLR1C	56	94.798	Saimiri_boliviensis_boliviensis
ENSCHOG00000006601	POLR1C	100	87.736	ENSSHAG00000014456	POLR1C	63	87.736	Sarcophilus_harrisii
ENSCHOG00000006601	POLR1C	100	71.226	ENSSFOG00015019860	polr1c	61	71.226	Scleropages_formosus
ENSCHOG00000006601	POLR1C	100	68.868	ENSSMAG00000018865	polr1c	62	68.868	Scophthalmus_maximus
ENSCHOG00000006601	POLR1C	100	69.340	ENSSDUG00000015745	polr1c	55	69.340	Seriola_dumerili
ENSCHOG00000006601	POLR1C	100	69.340	ENSSLDG00000018285	polr1c	55	69.340	Seriola_lalandi_dorsalis
ENSCHOG00000006601	POLR1C	99	77.619	ENSSPUG00000011822	POLR1C	61	77.619	Sphenodon_punctatus
ENSCHOG00000006601	POLR1C	100	69.340	ENSSPAG00000022369	polr1c	60	69.340	Stegastes_partitus
ENSCHOG00000006601	POLR1C	100	94.340	ENSSSCG00000028007	POLR1C	68	94.340	Sus_scrofa
ENSCHOG00000006601	POLR1C	100	80.189	ENSTGUG00000009159	POLR1C	63	80.189	Taeniopygia_guttata
ENSCHOG00000006601	POLR1C	99	67.773	ENSTRUG00000006264	polr1c	60	67.773	Takifugu_rubripes
ENSCHOG00000006601	POLR1C	60	70.866	ENSTNIG00000019804	polr1c	99	70.866	Tetraodon_nigroviridis
ENSCHOG00000006601	POLR1C	84	96.629	ENSTBEG00000002254	POLR1C	100	96.629	Tupaia_belangeri
ENSCHOG00000006601	POLR1C	100	92.453	ENSTTRG00000006344	POLR1C	61	92.453	Tursiops_truncatus
ENSCHOG00000006601	POLR1C	100	96.226	ENSUAMG00000025602	POLR1C	61	96.226	Ursus_americanus
ENSCHOG00000006601	POLR1C	100	96.226	ENSUMAG00000005938	POLR1C	61	96.226	Ursus_maritimus
ENSCHOG00000006601	POLR1C	100	91.038	ENSVVUG00000028922	POLR1C	60	91.038	Vulpes_vulpes
ENSCHOG00000006601	POLR1C	100	76.056	ENSXETG00000010882	polr1c	61	76.056	Xenopus_tropicalis
ENSCHOG00000006601	POLR1C	100	68.868	ENSXCOG00000014185	polr1c	61	68.868	Xiphophorus_couchianus
ENSCHOG00000006601	POLR1C	100	68.868	ENSXMAG00000015076	polr1c	60	68.868	Xiphophorus_maculatus