EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000006918 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HUPF3A|RENT3A|UPF3
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 21046 bases
Position: chrGeneScaffold_6132:468-21513
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006144	Smg4_UPF3	PF03467.15	3.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000006949	-	1446	-	ENSCHOP00000006144	481 (aa)	-	UPI0001F9F96A

Gene Model

Click here to download ENSCHOG00000006918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000006918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000006918	-	59	75.676	ENSG00000169062	UPF3A	84	81.308	Homo_sapiens
ENSCHOG00000006918	-	50	81.308	ENSAMEG00000004259	UPF3A	71	88.732	Ailuropoda_melanoleuca
ENSCHOG00000006918	-	69	91.892	ENSACAG00000001540	UPF3A	84	91.892	Anolis_carolinensis
ENSCHOG00000006918	-	60	77.027	ENSANAG00000021713	UPF3A	74	81.690	Aotus_nancymaae
ENSCHOG00000006918	-	81	77.600	ENSCJAG00000019102	UPF3A	87	77.049	Callithrix_jacchus
ENSCHOG00000006918	-	62	81.818	ENSTSYG00000001918	UPF3A	73	94.366	Carlito_syrichta
ENSCHOG00000006918	-	69	61.486	ENSCPOG00000006824	UPF3A	68	73.077	Cavia_porcellus
ENSCHOG00000006918	-	86	77.703	ENSCCAG00000018406	UPF3A	84	84.112	Cebus_capucinus
ENSCHOG00000006918	-	59	75.000	ENSCATG00000029733	UPF3A	73	92.958	Cercocebus_atys
ENSCHOG00000006918	-	59	74.497	ENSCSAG00000017388	UPF3A	68	94.366	Chlorocebus_sabaeus
ENSCHOG00000006918	-	74	79.487	ENSDNOG00000034391	UPF3A	79	82.090	Dasypus_novemcinctus
ENSCHOG00000006918	-	75	91.549	ENSEASG00005021884	UPF3A	62	92.857	Equus_asinus_asinus
ENSCHOG00000006918	-	81	77.778	ENSECAG00000017141	UPF3A	62	92.857	Equus_caballus
ENSCHOG00000006918	-	77	82.857	ENSFCAG00000014602	UPF3A	83	82.353	Felis_catus
ENSCHOG00000006918	-	56	62.963	ENSGGOG00000043074	-	77	93.151	Gorilla_gorilla
ENSCHOG00000006918	-	50	73.786	ENSGGOG00000041219	-	79	90.667	Gorilla_gorilla
ENSCHOG00000006918	-	59	75.000	ENSGGOG00000015428	UPF3A	82	85.000	Gorilla_gorilla
ENSCHOG00000006918	-	59	67.785	ENSMFAG00000045016	UPF3A	61	93.333	Macaca_fascicularis
ENSCHOG00000006918	-	52	66.892	ENSMMUG00000007449	UPF3A	67	94.366	Macaca_mulatta
ENSCHOG00000006918	-	59	61.006	ENSMNEG00000036402	UPF3A	64	93.056	Macaca_nemestrina
ENSCHOG00000006918	-	67	91.228	ENSMGAG00000014837	UPF3A	83	91.228	Meleagris_gallopavo
ENSCHOG00000006918	-	71	96.154	ENSMODG00000003159	UPF3A	84	96.154	Monodelphis_domestica
ENSCHOG00000006918	-	60	70.946	ENSMPUG00000009139	UPF3A	52	79.048	Mustela_putorius_furo
ENSCHOG00000006918	-	70	93.056	ENSMLUG00000015905	UPF3A	84	88.608	Myotis_lucifugus
ENSCHOG00000006918	-	75	66.667	ENSNGAG00000019314	Upf3a	70	85.714	Nannospalax_galili
ENSCHOG00000006918	-	59	73.826	ENSNLEG00000007563	UPF3A	78	91.358	Nomascus_leucogenys
ENSCHOG00000006918	-	51	73.043	ENSOCUG00000008450	UPF3A	55	73.043	Oryctolagus_cuniculus
ENSCHOG00000006918	-	66	87.324	ENSOARG00000009004	UPF3A	68	87.324	Ovis_aries
ENSCHOG00000006918	-	84	76.259	ENSPPAG00000042267	UPF3A	79	80.909	Pan_paniscus
ENSCHOG00000006918	-	77	82.857	ENSPPRG00000025062	UPF3A	83	82.353	Panthera_pardus
ENSCHOG00000006918	-	50	72.816	ENSPTRG00000051640	-	53	91.667	Pan_troglodytes
ENSCHOG00000006918	-	86	75.000	ENSPTRG00000006073	UPF3A	72	94.595	Pan_troglodytes
ENSCHOG00000006918	-	59	76.159	ENSPANG00000004346	UPF3A	73	92.958	Papio_anubis
ENSCHOG00000006918	-	71	92.000	ENSPSIG00000007468	UPF3A	83	92.000	Pelodiscus_sinensis
ENSCHOG00000006918	-	51	82.857	ENSPCIG00000019590	-	69	71.875	Phascolarctos_cinereus
ENSCHOG00000006918	-	57	74.324	ENSPPYG00000005536	UPF3A	79	80.000	Pongo_abelii
ENSCHOG00000006918	-	75	95.775	ENSPVAG00000005656	UPF3A	73	89.286	Pteropus_vampyrus
ENSCHOG00000006918	-	86	54.054	ENSSBOG00000029989	UPF3A	83	52.336	Saimiri_boliviensis_boliviensis
ENSCHOG00000006918	-	70	86.905	ENSSHAG00000009895	UPF3A	82	92.208	Sarcophilus_harrisii
ENSCHOG00000006918	-	60	70.946	ENSSSCG00000024679	UPF3A	69	87.324	Sus_scrofa
ENSCHOG00000006918	-	66	89.655	ENSTGUG00000009493	UPF3A	82	90.476	Taeniopygia_guttata
ENSCHOG00000006918	-	86	50.993	ENSTTRG00000015414	UPF3A	82	49.600	Tursiops_truncatus
ENSCHOG00000006918	-	70	95.946	ENSVPAG00000003525	UPF3A	82	95.946	Vicugna_pacos