EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000006997 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 5584 bases
Position: chrscaffold_102231:5-5588
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006204	FDF	PF09532.10	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007015	-	789	-	ENSCHOP00000006204	262 (aa)	-	UPI0001F9FAD3

Gene Model

Click here to download ENSCHOG00000006997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000006997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000006997	-	100	58.394	ENSG00000149657	LSM14B	99	62.041	Homo_sapiens
ENSCHOG00000006997	-	86	34.800	ENSAPOG00000001780	lsm14b	67	34.737	Acanthochromis_polyacanthus
ENSCHOG00000006997	-	100	65.894	ENSAMEG00000013430	LSM14B	71	64.570	Ailuropoda_melanoleuca
ENSCHOG00000006997	-	86	34.649	ENSACIG00000012266	lsm14b	66	35.094	Amphilophus_citrinellus
ENSCHOG00000006997	-	86	35.685	ENSAOCG00000012380	lsm14b	67	35.507	Amphiprion_ocellaris
ENSCHOG00000006997	-	86	33.473	ENSAPEG00000023633	lsm14b	67	35.401	Amphiprion_percula
ENSCHOG00000006997	-	54	43.262	ENSATEG00000015895	LSM14B	82	33.086	Anabas_testudineus
ENSCHOG00000006997	-	100	61.639	ENSAPLG00000013203	LSM14B	78	60.328	Anas_platyrhynchos
ENSCHOG00000006997	-	100	64.238	ENSANAG00000037915	LSM14B	71	63.245	Aotus_nancymaae
ENSCHOG00000006997	-	86	31.727	ENSACLG00000019663	lsm14b	67	34.672	Astatotilapia_calliptera
ENSCHOG00000006997	-	100	65.246	ENSBTAG00000021558	LSM14B	71	65.232	Bos_taurus
ENSCHOG00000006997	-	100	64.570	ENSCJAG00000014434	LSM14B	71	63.245	Callithrix_jacchus
ENSCHOG00000006997	-	100	72.826	ENSCAFG00020022150	LSM14B	69	71.739	Canis_lupus_dingo
ENSCHOG00000006997	-	100	65.902	ENSCHIG00000010284	-	71	65.902	Capra_hircus
ENSCHOG00000006997	-	100	58.029	ENSTSYG00000031914	LSM14B	68	55.986	Carlito_syrichta
ENSCHOG00000006997	-	100	62.662	ENSCAPG00000013059	LSM14B	99	62.338	Cavia_aperea
ENSCHOG00000006997	-	100	62.987	ENSCPOG00000038080	LSM14B	99	62.662	Cavia_porcellus
ENSCHOG00000006997	-	94	58.304	ENSCCAG00000024900	-	99	57.000	Cebus_capucinus
ENSCHOG00000006997	-	100	62.914	ENSCATG00000036006	LSM14B	71	62.252	Cercocebus_atys
ENSCHOG00000006997	-	100	62.338	ENSCLAG00000003186	LSM14B	99	62.914	Chinchilla_lanigera
ENSCHOG00000006997	-	100	63.245	ENSCSAG00000015729	LSM14B	71	62.583	Chlorocebus_sabaeus
ENSCHOG00000006997	-	100	60.596	ENSCPBG00000027065	LSM14B	72	60.265	Chrysemys_picta_bellii
ENSCHOG00000006997	-	100	58.029	ENSCANG00000036986	LSM14B	53	82.979	Colobus_angolensis_palliatus
ENSCHOG00000006997	-	100	65.017	ENSCGRG00001018399	Lsm14b	99	65.017	Cricetulus_griseus_chok1gshd
ENSCHOG00000006997	-	62	83.333	ENSCGRG00000002484	-	71	83.766	Cricetulus_griseus_crigri
ENSCHOG00000006997	-	97	64.189	ENSCGRG00000006111	-	99	64.189	Cricetulus_griseus_crigri
ENSCHOG00000006997	-	95	33.582	ENSCSEG00000020669	LSM14B	62	30.038	Cynoglossus_semilaevis
ENSCHOG00000006997	-	93	31.225	ENSCVAG00000012433	-	57	35.115	Cyprinodon_variegatus
ENSCHOG00000006997	-	63	40.828	ENSDARG00000025386	lsm14b	68	34.432	Danio_rerio
ENSCHOG00000006997	-	100	65.705	ENSDNOG00000025246	LSM14B	70	98.333	Dasypus_novemcinctus
ENSCHOG00000006997	-	100	63.399	ENSDORG00000016683	Lsm14b	50	81.818	Dipodomys_ordii
ENSCHOG00000006997	-	78	58.636	ENSETEG00000011188	-	89	53.304	Echinops_telfairi
ENSCHOG00000006997	-	99	54.924	ENSETEG00000001869	-	68	52.471	Echinops_telfairi
ENSCHOG00000006997	-	100	72.464	ENSEASG00005023218	LSM14B	99	72.464	Equus_asinus_asinus
ENSCHOG00000006997	-	100	64.169	ENSECAG00000010659	LSM14B	71	67.881	Equus_caballus
ENSCHOG00000006997	-	100	39.416	ENSELUG00000016299	LSM14B	68	37.778	Esox_lucius
ENSCHOG00000006997	-	99	38.376	ENSELUG00000005780	lsm14b	62	35.294	Esox_lucius
ENSCHOG00000006997	-	100	59.643	ENSFCAG00000003248	LSM14B	68	57.394	Felis_catus
ENSCHOG00000006997	-	100	61.290	ENSFALG00000010618	LSM14B	79	62.418	Ficedula_albicollis
ENSCHOG00000006997	-	100	62.662	ENSFDAG00000002214	LSM14B	99	63.245	Fukomys_damarensis
ENSCHOG00000006997	-	100	33.808	ENSFHEG00000006237	lsm14b	68	33.808	Fundulus_heteroclitus
ENSCHOG00000006997	-	100	33.588	ENSGMOG00000017115	lsm14b	64	34.351	Gadus_morhua
ENSCHOG00000006997	-	95	34.661	ENSGAFG00000013723	LSM14B	89	32.203	Gambusia_affinis
ENSCHOG00000006997	-	88	33.200	ENSGACG00000009973	lsm14b	62	34.000	Gasterosteus_aculeatus
ENSCHOG00000006997	-	59	76.129	ENSGAGG00000004106	LSM14B	60	76.129	Gopherus_agassizii
ENSCHOG00000006997	-	100	63.576	ENSGGOG00000005630	LSM14B	70	91.667	Gorilla_gorilla
ENSCHOG00000006997	-	100	63.312	ENSHGLG00000015055	LSM14B	99	63.907	Heterocephalus_glaber_female
ENSCHOG00000006997	-	100	63.312	ENSHGLG00100015273	LSM14B	100	63.907	Heterocephalus_glaber_male
ENSCHOG00000006997	-	94	32.364	ENSHCOG00000018747	LSM14B	64	32.016	Hippocampus_comes
ENSCHOG00000006997	-	86	33.628	ENSHCOG00000004867	lsm14b	87	31.646	Hippocampus_comes
ENSCHOG00000006997	-	86	32.677	ENSIPUG00000014946	lsm14b	65	36.237	Ictalurus_punctatus
ENSCHOG00000006997	-	100	65.574	ENSSTOG00000020482	LSM14B	99	65.246	Ictidomys_tridecemlineatus
ENSCHOG00000006997	-	100	64.145	ENSJJAG00000012728	Lsm14b	99	63.907	Jaculus_jaculus
ENSCHOG00000006997	-	86	36.214	ENSKMAG00000017524	lsm14b	62	36.614	Kryptolebias_marmoratus
ENSCHOG00000006997	-	100	35.878	ENSLBEG00000007951	LSM14B	88	36.017	Labrus_bergylta
ENSCHOG00000006997	-	100	45.513	ENSLACG00000003849	LSM14B	73	46.372	Latimeria_chalumnae
ENSCHOG00000006997	-	100	62.782	ENSLAFG00000007492	LSM14B	76	55.634	Loxodonta_africana
ENSCHOG00000006997	-	100	63.576	ENSMFAG00000041479	LSM14B	71	62.914	Macaca_fascicularis
ENSCHOG00000006997	-	100	58.394	ENSMMUG00000014084	LSM14B	68	57.042	Macaca_mulatta
ENSCHOG00000006997	-	100	58.394	ENSMNEG00000045573	LSM14B	68	57.042	Macaca_nemestrina
ENSCHOG00000006997	-	100	57.664	ENSMLEG00000040895	LSM14B	53	84.043	Mandrillus_leucophaeus
ENSCHOG00000006997	-	100	36.264	ENSMAMG00000024124	LSM14B	69	36.299	Mastacembelus_armatus
ENSCHOG00000006997	-	86	33.061	ENSMAMG00000020539	lsm14b	62	34.524	Mastacembelus_armatus
ENSCHOG00000006997	-	86	30.242	ENSMZEG00005000987	lsm14b	67	34.672	Maylandia_zebra
ENSCHOG00000006997	-	100	55.357	ENSMGAG00000005300	LSM14B	75	55.439	Meleagris_gallopavo
ENSCHOG00000006997	-	100	64.570	ENSMAUG00000020700	Lsm14b	99	65.347	Mesocricetus_auratus
ENSCHOG00000006997	-	100	64.570	ENSMICG00000014675	LSM14B	71	64.901	Microcebus_murinus
ENSCHOG00000006997	-	89	49.640	ENSMOCG00000005119	-	92	47.122	Microtus_ochrogaster
ENSCHOG00000006997	-	100	64.145	ENSMOCG00000020600	Lsm14b	99	64.356	Microtus_ochrogaster
ENSCHOG00000006997	-	88	34.711	ENSMMOG00000017321	LSM14B	59	36.214	Mola_mola
ENSCHOG00000006997	-	86	31.687	ENSMMOG00000020042	lsm14b	64	33.600	Mola_mola
ENSCHOG00000006997	-	100	57.843	ENSMODG00000016690	LSM14B	70	96.667	Monodelphis_domestica
ENSCHOG00000006997	-	89	33.333	ENSMALG00000022251	LSM14B	63	35.156	Monopterus_albus
ENSCHOG00000006997	-	93	35.802	ENSMALG00000004783	lsm14b	60	33.898	Monopterus_albus
ENSCHOG00000006997	-	100	65.232	MGP_CAROLIEiJ_G0024770	Lsm14b	71	63.245	Mus_caroli
ENSCHOG00000006997	-	100	65.894	ENSMUSG00000039108	Lsm14b	99	63.576	Mus_musculus
ENSCHOG00000006997	-	100	65.894	MGP_PahariEiJ_G0026214	Lsm14b	71	63.576	Mus_pahari
ENSCHOG00000006997	-	100	65.563	MGP_SPRETEiJ_G0025693	Lsm14b	71	63.576	Mus_spretus
ENSCHOG00000006997	-	100	58.029	ENSMLUG00000000304	LSM14B	69	60.595	Myotis_lucifugus
ENSCHOG00000006997	-	58	80.392	ENSNGAG00000016550	Lsm14b	67	80.519	Nannospalax_galili
ENSCHOG00000006997	-	100	58.029	ENSNLEG00000015757	LSM14B	53	84.043	Nomascus_leucogenys
ENSCHOG00000006997	-	70	83.871	ENSMEUG00000008267	-	53	77.922	Notamacropus_eugenii
ENSCHOG00000006997	-	100	64.356	ENSODEG00000004099	LSM14B	70	96.667	Octodon_degus
ENSCHOG00000006997	-	86	31.621	ENSONIG00000020318	lsm14b	69	32.624	Oreochromis_niloticus
ENSCHOG00000006997	-	59	52.903	ENSOANG00000003370	LSM14B	51	49.677	Ornithorhynchus_anatinus
ENSCHOG00000006997	-	100	56.584	ENSOCUG00000006279	LSM14B	76	55.439	Oryctolagus_cuniculus
ENSCHOG00000006997	-	51	40.602	ENSOMEG00000000171	-	63	40.972	Oryzias_melastigma
ENSCHOG00000006997	-	100	63.696	ENSOGAG00000003915	LSM14B	71	62.914	Otolemur_garnettii
ENSCHOG00000006997	-	100	66.118	ENSOARG00000014706	LSM14B	77	65.902	Ovis_aries
ENSCHOG00000006997	-	100	58.394	ENSPPAG00000035799	LSM14B	53	81.915	Pan_paniscus
ENSCHOG00000006997	-	100	59.643	ENSPPRG00000009197	LSM14B	68	57.394	Panthera_pardus
ENSCHOG00000006997	-	97	64.164	ENSPTIG00000021518	LSM14B	99	64.164	Panthera_tigris_altaica
ENSCHOG00000006997	-	100	58.394	ENSPTRG00000013696	LSM14B	68	57.042	Pan_troglodytes
ENSCHOG00000006997	-	100	58.029	ENSPANG00000011747	LSM14B	68	56.690	Papio_anubis
ENSCHOG00000006997	-	100	42.379	ENSPKIG00000003275	lsm14b	68	38.636	Paramormyrops_kingsleyae
ENSCHOG00000006997	-	100	61.056	ENSPSIG00000014762	LSM14B	99	59.076	Pelodiscus_sinensis
ENSCHOG00000006997	-	100	65.347	ENSPEMG00000017688	Lsm14b	99	64.238	Peromyscus_maniculatus_bairdii
ENSCHOG00000006997	-	100	55.755	ENSPCIG00000013405	LSM14B	68	55.036	Phascolarctos_cinereus
ENSCHOG00000006997	-	86	33.190	ENSPLAG00000005793	LSM14B	61	31.076	Poecilia_latipinna
ENSCHOG00000006997	-	77	34.928	ENSPMEG00000022953	LSM14B	61	34.274	Poecilia_mexicana
ENSCHOG00000006997	-	100	82.129	ENSPPYG00000011194	LSM14B	68	82.129	Pongo_abelii
ENSCHOG00000006997	-	100	58.759	ENSPCOG00000013625	LSM14B	68	57.394	Propithecus_coquereli
ENSCHOG00000006997	-	100	79.008	ENSPVAG00000017918	LSM14B	86	79.008	Pteropus_vampyrus
ENSCHOG00000006997	-	100	42.481	ENSPNAG00000012777	lsm14b	66	41.729	Pygocentrus_nattereri
ENSCHOG00000006997	-	100	65.563	ENSRNOG00000054557	Lsm14b	71	63.576	Rattus_norvegicus
ENSCHOG00000006997	-	100	63.576	ENSRBIG00000033461	LSM14B	78	63.576	Rhinopithecus_bieti
ENSCHOG00000006997	-	100	63.245	ENSRROG00000042949	LSM14B	99	62.295	Rhinopithecus_roxellana
ENSCHOG00000006997	-	84	85.075	ENSSBOG00000032820	LSM14B	69	85.075	Saimiri_boliviensis_boliviensis
ENSCHOG00000006997	-	100	61.056	ENSSHAG00000015528	LSM14B	50	77.922	Sarcophilus_harrisii
ENSCHOG00000006997	-	86	41.176	ENSSFOG00015004627	lsm14b	69	37.681	Scleropages_formosus
ENSCHOG00000006997	-	96	38.376	ENSSMAG00000000135	LSM14B	63	35.581	Scophthalmus_maximus
ENSCHOG00000006997	-	86	35.124	ENSSMAG00000012725	lsm14b	68	34.191	Scophthalmus_maximus
ENSCHOG00000006997	-	89	37.398	ENSSDUG00000022770	LSM14B	62	37.945	Seriola_dumerili
ENSCHOG00000006997	-	86	34.979	ENSSDUG00000020977	lsm14b	68	34.892	Seriola_dumerili
ENSCHOG00000006997	-	100	60.855	ENSSPUG00000014360	LSM14B	72	60.131	Sphenodon_punctatus
ENSCHOG00000006997	-	86	35.983	ENSSPAG00000020915	lsm14b	65	35.115	Stegastes_partitus
ENSCHOG00000006997	-	100	70.221	ENSSSCG00000026052	LSM14B	99	64.901	Sus_scrofa
ENSCHOG00000006997	-	100	55.957	ENSTGUG00000007884	LSM14B	76	58.824	Taeniopygia_guttata
ENSCHOG00000006997	-	100	36.525	ENSTRUG00000011354	lsm14b	67	35.018	Takifugu_rubripes
ENSCHOG00000006997	-	88	37.705	ENSTNIG00000002445	lsm14b	62	36.434	Tetraodon_nigroviridis
ENSCHOG00000006997	-	100	80.916	ENSTTRG00000011043	LSM14B	68	80.916	Tursiops_truncatus
ENSCHOG00000006997	-	100	73.188	ENSUAMG00000025298	LSM14B	70	72.101	Ursus_americanus
ENSCHOG00000006997	-	100	73.188	ENSUMAG00000000480	LSM14B	70	72.101	Ursus_maritimus
ENSCHOG00000006997	-	100	72.464	ENSVVUG00000015920	LSM14B	99	71.377	Vulpes_vulpes
ENSCHOG00000006997	-	78	53.846	ENSXETG00000001997	lsm14b	67	55.061	Xenopus_tropicalis